RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 TMEM87BQ96K49 555 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 CDC5LQ99459 802 aaKnown RBP5.62□□□□□ -1.51
LMO3-229ENST00000543721 TSGA10Q9BZW7 698 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 SAMSN1Q9NSI8 373 aaKnown RBP5.62□□□□□ -1.51
LMO3-229ENST00000543721 LIMA1Q9UHB6 759 aaKnown RBP5.62□□□□□ -1.51
LMO3-229ENST00000543721 CPDO75976 1380 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 HEG1Q9ULI3 1381 aa5.62□□□□□ -1.51
LMO3-229ENST00000543721 NWD1Q149M9 1564 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 NEURL1BA8MQ27 555 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 GCFC2P16383 781 aaKnown RBP5.61□□□□□ -1.51
LMO3-229ENST00000543721 SLC8A1P32418 973 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 METAP2P50579 478 aaKnown RBP eCLIP5.61□□□□□ -1.51
LMO3-229ENST00000543721 IRX1P78414 480 aaPredicted RBP5.61□□□□□ -1.51
LMO3-229ENST00000543721 SEMA3FQ13275 785 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 HSP90AB3PQ58FF7 597 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 EMC10Q5UCC4 262 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 CPLX3Q8WVH0 158 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 XAGE2Q96GT9 111 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 NUP88Q99567 741 aaPredicted RBP5.61□□□□□ -1.51
LMO3-229ENST00000543721 DBNDD2Q9BQY9 259 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 METTL22Q9BUU2 404 aaPredicted RBP5.61□□□□□ -1.51
LMO3-229ENST00000543721 CARD10Q9BWT7 1032 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 ABHD10Q9NUJ1 306 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 HPS5Q9UPZ3 1129 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 ZC3H4Q9UPT8 1303 aaKnown RBP5.61□□□□□ -1.51
LMO3-229ENST00000543721 ANKRD65E5RJM6 399 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 ZNF213O14771 459 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 N4BP3O15049 544 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 NDUFA10O95299 355 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 PRLRP16471 622 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 BMP6P22004 513 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 TNFRSF8P28908 595 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 MRPL12P52815 198 aaKnown RBP5.61□□□□□ -1.51
LMO3-229ENST00000543721 PTPN12Q05209 780 aaKnown RBP5.61□□□□□ -1.51
LMO3-229ENST00000543721 GLE1Q53GS7 698 aaKnown RBP5.61□□□□□ -1.51
LMO3-229ENST00000543721 SLC9C2Q5TAH2 1124 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 LRCH2Q5VUJ6 765 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 FBXW10Q5XX13 1052 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 KCNV1Q6PIU1 500 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 CCDC155Q8N6L0 562 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 OR8K1Q8NGG5 319 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 AENQ8WTP8 325 aaKnown RBP5.61□□□□□ -1.51
LMO3-229ENST00000543721 TEX13AQ9BXU3 409 aaPredicted RBP5.61□□□□□ -1.51
LMO3-229ENST00000543721 SERTAD1Q9UHV2 236 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 ODF2LQ9ULJ1 636 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 ANGEL1Q9UNK9 670 aaKnown RBP5.61□□□□□ -1.51
LMO3-229ENST00000543721 SRPRBQ9Y5M8 271 aaKnown RBP5.61□□□□□ -1.51
LMO3-229ENST00000543721 USP54Q70EL1 1684 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 MAST3O60307 1309 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 GOLIM4O00461 696 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 IFIT1P09914 478 aaKnown RBP5.61□□□□□ -1.51
LMO3-229ENST00000543721 KRT9P35527 623 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 IL15P40933 162 aaPredicted RBP5.61□□□□□ -1.51
LMO3-229ENST00000543721 RFX5P48382 616 aaPredicted RBP5.61□□□□□ -1.51
LMO3-229ENST00000543721 FNTAP49354 379 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 SSRP1Q08945 709 aaKnown RBP5.61□□□□□ -1.51
LMO3-229ENST00000543721 SLMAPQ14BN4 828 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 WLSQ5T9L3 541 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 NCAPH2Q6IBW4 605 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 ZNF530Q6P9A1 599 aaPredicted RBP5.61□□□□□ -1.51
LMO3-229ENST00000543721 ARMC9Q7Z3E5 817 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 KIAA1328Q86T90 577 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 NOSTRINQ8IVI9 506 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 TEX11Q8IYF3 940 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 CCDC170Q8IYT3 715 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 MIEF2Q96C03 454 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 JPH2Q9BR39 696 aaPredicted RBP5.61□□□□□ -1.51
LMO3-229ENST00000543721 NUP58Q9BVL2 599 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 FOXP1Q9H334 677 aaPredicted RBP5.61□□□□□ -1.51
LMO3-229ENST00000543721 MCM8Q9UJA3 840 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 ABCC12Q96J65 1359 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 LMO7Q8WWI1 1683 aa5.61□□□□□ -1.51
LMO3-229ENST00000543721 ROBO2Q9HCK4 1378 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 AGPSO00116 658 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 POLR2DO15514 142 aaKnown RBP5.6□□□□□ -1.51
LMO3-229ENST00000543721 RNMTO43148 476 aaKnown RBP5.6□□□□□ -1.51
LMO3-229ENST00000543721 TEX33O43247 280 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 ANXA1P04083 346 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 GYPCP04921 128 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 CDC27P30260 824 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 ZKSCAN8Q15776 578 aaPredicted RBP5.6□□□□□ -1.51
LMO3-229ENST00000543721 CCDC40Q4G0X9 1142 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 CEP85LQ5SZL2 805 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 CCDC122Q5T0U0 273 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 KDM7AQ6ZMT4 941 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 APTXQ7Z2E3 356 aaKnown RBP5.6□□□□□ -1.51
LMO3-229ENST00000543721 ZNF572Q7Z3I7 529 aaPredicted RBP5.6□□□□□ -1.51
LMO3-229ENST00000543721 TRIM22Q8IYM9 498 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 RETREG2Q8NC44 543 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 ACRBPQ8NEB7 543 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.6□□□□□ -1.51
LMO3-229ENST00000543721 CAVIN3Q969G5 261 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 JAKMIP2Q96AA8 810 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 EPN3Q9H201 632 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 PLEKHA4Q9H4M7 779 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 VCPKMTQ9H867 229 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 BATF3Q9NR55 127 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 KLC4Q9NSK0 619 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 RMND1Q9NWS8 449 aa5.6□□□□□ -1.51
LMO3-229ENST00000543721 RNF14Q9UBS8 474 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms