RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 GJD2Q9UKL4 321 aa6.16□□□□□ -1.42
NPIPB4-219ENST00000543660 SLC45A1Q9Y2W3 748 aa6.16□□□□□ -1.42
NPIPB4-219ENST00000543660 RPAP1Q9BWH6 1393 aaPredicted RBP6.16□□□□□ -1.42
NPIPB4-219ENST00000543660 ANKRD18BA2A2Z9 1011 aa6.15□□□□□ -1.42
NPIPB4-219ENST00000543660 TLL1O43897 1013 aa6.15□□□□□ -1.42
NPIPB4-219ENST00000543660 S1PR4O95977 384 aa6.15□□□□□ -1.42
NPIPB4-219ENST00000543660 HIBADHP31937 336 aaKnown RBP6.15□□□□□ -1.42
NPIPB4-219ENST00000543660 GYG1P46976 350 aa6.15□□□□□ -1.42
NPIPB4-219ENST00000543660 NEXNQ0ZGT2 675 aa6.15□□□□□ -1.42
NPIPB4-219ENST00000543660 MAP3K12Q12852 859 aa6.15□□□□□ -1.42
NPIPB4-219ENST00000543660 GCKRQ14397 625 aa6.15□□□□□ -1.42
NPIPB4-219ENST00000543660 KMT5BQ4FZB7 885 aa6.15□□□□□ -1.42
NPIPB4-219ENST00000543660 MAP3K21Q5TCX8 1036 aa6.15□□□□□ -1.42
NPIPB4-219ENST00000543660 FASTKD5Q7L8L6 764 aaKnown RBP6.15□□□□□ -1.42
NPIPB4-219ENST00000543660 FAM177A1Q8N128 213 aaPredicted RBP6.15□□□□□ -1.42
NPIPB4-219ENST00000543660 ANKRD13CQ8N6S4 541 aa6.15□□□□□ -1.42
NPIPB4-219ENST00000543660 C8orf58Q8NAV2 365 aa6.15□□□□□ -1.42
NPIPB4-219ENST00000543660 USP38Q8NB14 1042 aa6.15□□□□□ -1.42
NPIPB4-219ENST00000543660 CALR3Q96L12 384 aaKnown RBP6.15□□□□□ -1.42
NPIPB4-219ENST00000543660 PRM3Q9NNZ6 103 aa6.15□□□□□ -1.42
NPIPB4-219ENST00000543660 STK17AQ9UEE5 414 aa6.15□□□□□ -1.42
NPIPB4-219ENST00000543660 A0A1B0GUL6 1792 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 TMEM265A0A087WTH1 108 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 PHF20L1A8MW92 1017 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 ST8SIA5O15466 376 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 ACTN4O43707 911 aaKnown RBP6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 PLIN1O60240 522 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 ADH1BP00325 375 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 FOSL2P15408 326 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 PTPRAP18433 802 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 DNAJB2P25686 324 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 FOXO4P98177 505 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 IFIT5Q13325 482 aaKnown RBP6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 SHHQ15465 462 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 FAM110CQ1W6H9 321 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 SND1Q7KZF4 910 aaKnown RBP eCLIP6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 CCDC146Q8IYE0 955 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 SMCR8Q8TEV9 937 aaPredicted RBP6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 FAM151AQ8WW52 585 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 TRIB2Q92519 343 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 TEKT1Q969V4 418 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 POM121Q96HA1 1249 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 TMOD2Q9NZR1 351 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 AFG3L2Q9Y4W6 797 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 ZHX2Q9Y6X8 837 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 SYNGAP1Q96PV0 1343 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 XIRP2A4UGR9 3374 aa6.14□□□□□ -1.43
NPIPB4-219ENST00000543660 MUC6Q6W4X9 2439 aa6.13□□□□□ -1.43
NPIPB4-219ENST00000543660 GPR37O15354 613 aa6.13□□□□□ -1.43
NPIPB4-219ENST00000543660 WFS1O76024 890 aa6.13□□□□□ -1.43
NPIPB4-219ENST00000543660 SMAD3P84022 425 aaKnown RBP6.13□□□□□ -1.43
NPIPB4-219ENST00000543660 UBE4AQ14139 1066 aa6.13□□□□□ -1.43
NPIPB4-219ENST00000543660 C9orf50Q5SZB4 431 aa6.13□□□□□ -1.43
NPIPB4-219ENST00000543660 CCDC30Q5VVM6 783 aa6.13□□□□□ -1.43
NPIPB4-219ENST00000543660 HHIPL2Q6UWX4 724 aa6.13□□□□□ -1.43
NPIPB4-219ENST00000543660 LDHAL6AQ6ZMR3 332 aa6.13□□□□□ -1.43
NPIPB4-219ENST00000543660 GADL1Q6ZQY3 521 aa6.13□□□□□ -1.43
NPIPB4-219ENST00000543660 FBXO33Q7Z6M2 555 aa6.13□□□□□ -1.43
NPIPB4-219ENST00000543660 TBC1D22AQ8WUA7 517 aa6.13□□□□□ -1.43
NPIPB4-219ENST00000543660 PBXIP1Q96AQ6 731 aa6.13□□□□□ -1.43
NPIPB4-219ENST00000543660 ZNF594Q96JF6 807 aaPredicted RBP6.13□□□□□ -1.43
NPIPB4-219ENST00000543660 LBHD1Q9BQE6 289 aaPredicted RBP6.13□□□□□ -1.43
NPIPB4-219ENST00000543660 IQSEC3Q9UPP2 1182 aaPredicted RBP6.13□□□□□ -1.43
NPIPB4-219ENST00000543660 COG6Q9Y2V7 657 aa6.13□□□□□ -1.43
NPIPB4-219ENST00000543660 NR1I2O75469 434 aa6.12□□□□□ -1.43
NPIPB4-219ENST00000543660 INSM1Q01101 510 aaPredicted RBP6.12□□□□□ -1.43
NPIPB4-219ENST00000543660 TCP10Q12799 353 aa6.12□□□□□ -1.43
NPIPB4-219ENST00000543660 NFIAQ12857 509 aa6.12□□□□□ -1.43
NPIPB4-219ENST00000543660 CHAF1AQ13111 956 aaPredicted RBP6.12□□□□□ -1.43
NPIPB4-219ENST00000543660 HIC1Q14526 733 aa6.12□□□□□ -1.43
NPIPB4-219ENST00000543660 EPHA10Q5JZY3 1008 aa6.12□□□□□ -1.43
NPIPB4-219ENST00000543660 TREML2Q5T2D2 321 aa6.12□□□□□ -1.43
NPIPB4-219ENST00000543660 ATRNL1Q5VV63 1379 aa6.12□□□□□ -1.43
NPIPB4-219ENST00000543660 G2E3Q7L622 706 aa6.12□□□□□ -1.43
NPIPB4-219ENST00000543660 ZFPM1Q8IX07 1006 aa6.12□□□□□ -1.43
NPIPB4-219ENST00000543660 SCYL3Q8IZE3 742 aa6.12□□□□□ -1.43
NPIPB4-219ENST00000543660 TSPYL6Q8N831 410 aa6.12□□□□□ -1.43
NPIPB4-219ENST00000543660 RUNDC1Q96C34 613 aa6.12□□□□□ -1.43
NPIPB4-219ENST00000543660 TMEM134Q9H6X4 195 aa6.12□□□□□ -1.43
NPIPB4-219ENST00000543660 IFT57Q9NWB7 429 aa6.12□□□□□ -1.43
NPIPB4-219ENST00000543660 AGTPBP1Q9UPW5 1226 aa6.12□□□□□ -1.43
NPIPB4-219ENST00000543660 PLXNB2O15031 1838 aa6.11□□□□□ -1.43
NPIPB4-219ENST00000543660 TRIM75PA6NK02 468 aa6.11□□□□□ -1.43
NPIPB4-219ENST00000543660 WIPF1O43516 503 aa6.11□□□□□ -1.43
NPIPB4-219ENST00000543660 AVPP01185 164 aa6.11□□□□□ -1.43
NPIPB4-219ENST00000543660 XRCC5P13010 732 aaKnown RBP6.11□□□□□ -1.43
NPIPB4-219ENST00000543660 NCLP19338 710 aaKnown RBP6.11□□□□□ -1.43
NPIPB4-219ENST00000543660 CYP2B6P20813 491 aa6.11□□□□□ -1.43
NPIPB4-219ENST00000543660 CCND3P30281 292 aaPredicted RBP6.11□□□□□ -1.43
NPIPB4-219ENST00000543660 GNAI1P63096 354 aa6.11□□□□□ -1.43
NPIPB4-219ENST00000543660 MAP3K10Q02779 954 aa6.11□□□□□ -1.43
NPIPB4-219ENST00000543660 CACNB2Q08289 660 aaPredicted RBP6.11□□□□□ -1.43
NPIPB4-219ENST00000543660 GRIN2CQ14957 1233 aa6.11□□□□□ -1.43
NPIPB4-219ENST00000543660 SKIV2LQ15477 1246 aaKnown RBP6.11□□□□□ -1.43
NPIPB4-219ENST00000543660 B4GALNT3Q6L9W6 998 aa6.11□□□□□ -1.43
NPIPB4-219ENST00000543660 CDC42EP5Q6NZY7 148 aa6.11□□□□□ -1.43
NPIPB4-219ENST00000543660 LMBR1LQ6UX01 489 aa6.11□□□□□ -1.43
NPIPB4-219ENST00000543660 LINS1Q8NG48 757 aa6.11□□□□□ -1.43
NPIPB4-219ENST00000543660 ADAMTS19Q8TE59 1207 aa6.11□□□□□ -1.43
NPIPB4-219ENST00000543660 ATXN2LQ8WWM7 1075 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms