RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 DDAH1O94760 285 aa15.4■□□□□ 0.06
PPME1-208ENST00000543525 ERFEQ4G0M1 354 aa15.4■□□□□ 0.06
PPME1-208ENST00000543525 PHLPP2Q6ZVD8 1323 aa15.4■□□□□ 0.06
PPME1-208ENST00000543525 DUOX1Q9NRD9 1551 aa15.39■□□□□ 0.05
PPME1-208ENST00000543525 TMEM232C9JQI7 657 aa15.39■□□□□ 0.05
PPME1-208ENST00000543525 FGRP09769 529 aa15.39■□□□□ 0.05
PPME1-208ENST00000543525 ERCC5P28715 1186 aaPredicted RBP15.39■□□□□ 0.05
PPME1-208ENST00000543525 PLCD1P51178 756 aa15.39■□□□□ 0.05
PPME1-208ENST00000543525 DYNLL1P63167 89 aaKnown RBP15.39■□□□□ 0.05
PPME1-208ENST00000543525 PKN1Q16512 942 aa15.39■□□□□ 0.05
PPME1-208ENST00000543525 FERMT2Q96AC1 680 aa15.39■□□□□ 0.05
PPME1-208ENST00000543525 VPS54Q9P1Q0 977 aa15.39■□□□□ 0.05
PPME1-208ENST00000543525 NFE2L3Q9Y4A8 694 aa15.39■□□□□ 0.05
PPME1-208ENST00000543525 ARHGAP6O43182 974 aa15.39■□□□□ 0.05
PPME1-208ENST00000543525 ZNF18P17022 549 aa15.39■□□□□ 0.05
PPME1-208ENST00000543525 ETF1P62495 437 aaKnown RBP15.39■□□□□ 0.05
PPME1-208ENST00000543525 FUT2Q10981 343 aa15.39■□□□□ 0.05
PPME1-208ENST00000543525 TBX2Q13207 712 aaPredicted RBP15.39■□□□□ 0.05
PPME1-208ENST00000543525 PDILTQ8N807 584 aa15.39■□□□□ 0.05
PPME1-208ENST00000543525 MINPP1Q9UNW1 487 aa15.39■□□□□ 0.05
PPME1-208ENST00000543525 V9GY48 417 aaPredicted RBP15.39■□□□□ 0.05
PPME1-208ENST00000543525 COL1A1P02452 1464 aaPredicted RBP15.38■□□□□ 0.05
PPME1-208ENST00000543525 FMR1Q06787 632 aaKnown RBP eCLIP15.38■□□□□ 0.05
PPME1-208ENST00000543525 SPATA20Q8TB22 786 aa15.38■□□□□ 0.05
PPME1-208ENST00000543525 FAM84BQ96KN1 310 aaPredicted RBP15.38■□□□□ 0.05
PPME1-208ENST00000543525 MYH14Q7Z406 1995 aaKnown RBP15.38■□□□□ 0.05
PPME1-208ENST00000543525 GOLGA6L9A6NEM1 432 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 RGL2O15211 777 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 CCDC93Q567U6 631 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 CTR9Q6PD62 1173 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 FBXO33Q7Z6M2 555 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 GRAMD1CQ8IYS0 662 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 PRDM10Q9NQV6 1147 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 INTS13Q9NVM9 706 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 DDX41Q9UJV9 622 aaKnown RBP15.37■□□□□ 0.05
PPME1-208ENST00000543525 CACNA1SQ13698 1873 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 MYH6P13533 1939 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 A0A1B0GUL6 1792 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 NRAPQ86VF7 1730 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 PDS5AQ29RF7 1337 aaKnown RBP15.37■□□□□ 0.05
PPME1-208ENST00000543525 CYP2D7A0A087X1C5 515 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 ORC4O43929 436 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 PLEKHA8P1O95397 391 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 SLFN14P0C7P3 912 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 GTF2E1P29083 439 aaPredicted RBP15.37■□□□□ 0.05
PPME1-208ENST00000543525 ELF2Q15723 593 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 SLC10A5Q5PT55 438 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 UTP14CQ5TAP6 766 aaKnown RBP15.37■□□□□ 0.05
PPME1-208ENST00000543525 SPECC1LQ69YQ0 1117 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 TMTC3Q6ZXV5 915 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 REXO1L1PQ8IX06 675 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 DHX58Q96C10 678 aa15.37■□□□□ 0.05
PPME1-208ENST00000543525 BAG1Q99933 345 aaPredicted RBP15.37■□□□□ 0.05
PPME1-208ENST00000543525 GTPBP4Q9BZE4 634 aaKnown RBP15.37■□□□□ 0.05
PPME1-208ENST00000543525 CRNKL1Q9BZJ0 848 aaKnown RBP15.37■□□□□ 0.05
PPME1-208ENST00000543525 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.37■□□□□ 0.05
PPME1-208ENST00000543525 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.37■□□□□ 0.052e-7■□□□□ 11.2
PPME1-208ENST00000543525 V9GYY5 206 aaPredicted RBP15.37■□□□□ 0.05
PPME1-208ENST00000543525 COL4A1P02462 1669 aa15.36■□□□□ 0.05
PPME1-208ENST00000543525 PRDM1O75626 825 aa15.36■□□□□ 0.05
PPME1-208ENST00000543525 DMTNQ08495 405 aa15.36■□□□□ 0.05
PPME1-208ENST00000543525 TROAPQ12815 778 aa15.36■□□□□ 0.05
PPME1-208ENST00000543525 ZNF827Q17R98 1081 aa15.36■□□□□ 0.05
PPME1-208ENST00000543525 TMED8Q6PL24 325 aaPredicted RBP15.36■□□□□ 0.05
PPME1-208ENST00000543525 C3orf67Q6ZVT6 689 aa15.36■□□□□ 0.05
PPME1-208ENST00000543525 USP49Q70CQ1 688 aa15.36■□□□□ 0.05
PPME1-208ENST00000543525 CTCFLQ8NI51 663 aaPredicted RBP15.36■□□□□ 0.05
PPME1-208ENST00000543525 SHISA4Q96DD7 197 aa15.36■□□□□ 0.05
PPME1-208ENST00000543525 SRRTQ9BXP5 876 aaKnown RBP15.36■□□□□ 0.05
PPME1-208ENST00000543525 BCL11BQ9C0K0 894 aaPredicted RBP15.36■□□□□ 0.05
PPME1-208ENST00000543525 DNAI1Q9UI46 699 aa15.36■□□□□ 0.05
PPME1-208ENST00000543525 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.36■□□□□ 0.05
PPME1-208ENST00000543525 DLEC1Q9Y238 1755 aa15.36■□□□□ 0.05
PPME1-208ENST00000543525 SPATA31A5Q5VU36 1347 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 SPATA31A7Q8IWB4 1347 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 FAM205CA6NFA0 338 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 USP17L12C9JPN9 530 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 USP17L21D6R901 530 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 STX10O60499 249 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 FAM98CQ17RN3 349 aaKnown RBP15.35■□□□□ 0.05
PPME1-208ENST00000543525 TTC38Q5R3I4 469 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 BARGINQ6ZT62 677 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 SH3RF1Q7Z6J0 888 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 TMEM139Q8IV31 216 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 TRMT44Q8IYL2 757 aaKnown RBP15.35■□□□□ 0.05
PPME1-208ENST00000543525 SCN7AQ01118 1682 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 SMIM22K7EJ46 135 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 ZSCAN20P17040 1043 aaPredicted RBP15.35■□□□□ 0.05
PPME1-208ENST00000543525 GOLGA8FQ08AF8 430 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 GOLGA8DPQ0D2H9 430 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 KMT5BQ4FZB7 885 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 HSP90AA4PQ58FG1 418 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 SPATA1Q5VX52 437 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 TRIM65Q6PJ69 517 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 SYMPKQ92797 1274 aaKnown RBP15.35■□□□□ 0.05
PPME1-208ENST00000543525 NSUN4Q96CB9 384 aaKnown RBP15.35■□□□□ 0.05
PPME1-208ENST00000543525 PAGE5Q96GU1 130 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 PYM1Q9BRP8 204 aaKnown RBP15.35■□□□□ 0.05
PPME1-208ENST00000543525 ANKRD2Q9GZV1 360 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 ATP8A2Q9NTI2 1148 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms