RNA–Protein interactions for RNA: ENST00000543428.5

PSME3-204, Transcript of proteasome activator subunit 3, humanhuman

TSL 2

Gene PSME3, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-204ENST00000543428 ACER1Q8TDN7 264 aa25.83■■□□□ 1.73
PSME3-204ENST00000543428 C12orf42Q96LP6 360 aa25.83■■□□□ 1.73
PSME3-204ENST00000543428 SLC4A4Q9Y6R1 1079 aa25.83■■□□□ 1.73
PSME3-204ENST00000543428 USP17L15C9J2P7 530 aa25.82■■□□□ 1.72
PSME3-204ENST00000543428 USP17L13C9JLJ4 530 aa25.82■■□□□ 1.72
PSME3-204ENST00000543428 USP17L11C9JVI0 530 aa25.82■■□□□ 1.72
PSME3-204ENST00000543428 USP17L18D6R9N7 530 aa25.82■■□□□ 1.72
PSME3-204ENST00000543428 USP17L22D6RA61 530 aa25.82■■□□□ 1.72
PSME3-204ENST00000543428 USP17L17D6RBQ6 530 aa25.82■■□□□ 1.72
PSME3-204ENST00000543428 USP17L19D6RCP7 530 aa25.82■■□□□ 1.72
PSME3-204ENST00000543428 USP17L20D6RJB6 530 aa25.82■■□□□ 1.72
PSME3-204ENST00000543428 USP17L24Q0WX57 530 aa25.82■■□□□ 1.72
PSME3-204ENST00000543428 SLC44A5Q8NCS7 719 aa25.82■■□□□ 1.72
PSME3-204ENST00000543428 DYNLL2Q96FJ2 89 aa25.82■■□□□ 1.72
PSME3-204ENST00000543428 PAGR1Q9BTK6 254 aa25.82■■□□□ 1.72
PSME3-204ENST00000543428 BRCA2P51587 3418 aa25.82■■□□□ 1.72
PSME3-204ENST00000543428 MYH8P13535 1937 aa25.81■■□□□ 1.72
PSME3-204ENST00000543428 INHAP05111 366 aa25.81■■□□□ 1.72
PSME3-204ENST00000543428 GJB1P08034 283 aa25.81■■□□□ 1.72
PSME3-204ENST00000543428 PUS7LQ9H0K6 701 aaKnown RBP25.81■■□□□ 1.72
PSME3-204ENST00000543428 TXNRD2Q9NNW7 524 aa25.81■■□□□ 1.72
PSME3-204ENST00000543428 ZBTB47Q9UFB7 747 aaPredicted RBP25.81■■□□□ 1.72
PSME3-204ENST00000543428 USP17L12C9JPN9 530 aa25.8■■□□□ 1.72
PSME3-204ENST00000543428 USP17L21D6R901 530 aa25.8■■□□□ 1.72
PSME3-204ENST00000543428 GUCY1A2P33402 732 aa25.8■■□□□ 1.72
PSME3-204ENST00000543428 TMEM179Q6ZVK1 233 aa25.8■■□□□ 1.72
PSME3-204ENST00000543428 KBTBD3Q8NAB2 608 aa25.8■■□□□ 1.72
PSME3-204ENST00000543428 UNC93B1Q9H1C4 597 aa25.8■■□□□ 1.72
PSME3-204ENST00000543428 RBPJLQ9UBG7 517 aa25.8■■□□□ 1.72
PSME3-204ENST00000543428 MKI67P46013 3256 aaKnown RBP25.8■■□□□ 1.72
PSME3-204ENST00000543428 PEX10O60683 326 aa25.79■■□□□ 1.72
PSME3-204ENST00000543428 VCAM1P19320 739 aa25.79■■□□□ 1.72
PSME3-204ENST00000543428 GJA8P48165 433 aa25.79■■□□□ 1.72
PSME3-204ENST00000543428 C12orf60Q5U649 245 aa25.79■■□□□ 1.72
PSME3-204ENST00000543428 CRBNQ96SW2 442 aa25.79■■□□□ 1.72
PSME3-204ENST00000543428 CWC22Q9HCG8 908 aaKnown RBP25.79■■□□□ 1.72
PSME3-204ENST00000543428 CYP2D7A0A087X1C5 515 aa25.78■■□□□ 1.72
PSME3-204ENST00000543428 ERC2O15083 957 aa25.78■■□□□ 1.72
PSME3-204ENST00000543428 ERVK-9P63128 1117 aa25.78■■□□□ 1.72
PSME3-204ENST00000543428 ERVK-24P63145 666 aa25.78■■□□□ 1.72
PSME3-204ENST00000543428 MAPK4P31152 587 aa25.77■■□□□ 1.72
PSME3-204ENST00000543428 LRRFIP1Q32MZ4 808 aaKnown RBP25.77■■□□□ 1.72
PSME3-204ENST00000543428 CATSPERGQ6ZRH7 1159 aa25.77■■□□□ 1.72
PSME3-204ENST00000543428 SHISA4Q96DD7 197 aa25.77■■□□□ 1.72
PSME3-204ENST00000543428 RPAP3Q9H6T3 665 aaPredicted RBP25.77■■□□□ 1.72
PSME3-204ENST00000543428 GJD2Q9UKL4 321 aa25.77■■□□□ 1.72
PSME3-204ENST00000543428 RABGAP1Q9Y3P9 1069 aa25.77■■□□□ 1.72
PSME3-204ENST00000543428 TTC41PQ6P2S7 1318 aa25.77■■□□□ 1.72
PSME3-204ENST00000543428 RNF113AO15541 343 aaKnown RBP25.76■■□□□ 1.71
PSME3-204ENST00000543428 ZFYP08048 801 aaPredicted RBP25.76■■□□□ 1.71
PSME3-204ENST00000543428 CDK8P49336 464 aa25.76■■□□□ 1.71
PSME3-204ENST00000543428 U2AF1L4Q8WU68 220 aaKnown RBP25.76■■□□□ 1.71
PSME3-204ENST00000543428 APPBP2Q92624 585 aa25.76■■□□□ 1.71
PSME3-204ENST00000543428 CCDC17Q96LX7 622 aa25.76■■□□□ 1.71
PSME3-204ENST00000543428 STRBPQ96SI9 672 aaKnown RBP25.76■■□□□ 1.71
PSME3-204ENST00000543428 NUDT12Q9BQG2 462 aa25.76■■□□□ 1.71
PSME3-204ENST00000543428 AKR1B1P15121 316 aa25.75■■□□□ 1.71
PSME3-204ENST00000543428 CCNA1P78396 465 aa25.75■■□□□ 1.71
PSME3-204ENST00000543428 Q3C1V9 767 aa25.75■■□□□ 1.71
PSME3-204ENST00000543428 CTR9Q6PD62 1173 aa25.75■■□□□ 1.71
PSME3-204ENST00000543428 C16orf86Q6ZW13 317 aa25.75■■□□□ 1.71
PSME3-204ENST00000543428 SOCS4Q8WXH5 440 aa25.75■■□□□ 1.71
PSME3-204ENST00000543428 ARHGEF10LQ9HCE6 1279 aa25.75■■□□□ 1.71
PSME3-204ENST00000543428 ARPP21Q9UBL0 812 aaPredicted RBP25.75■■□□□ 1.71
PSME3-204ENST00000543428 A0A1W2PRG0 241 aa25.74■■□□□ 1.71
PSME3-204ENST00000543428 GLRX3O76003 335 aaKnown RBP25.74■■□□□ 1.71
PSME3-204ENST00000543428 HMGCRP04035 888 aa25.74■■□□□ 1.71
PSME3-204ENST00000543428 CYP2B6P20813 491 aa25.74■■□□□ 1.71
PSME3-204ENST00000543428 ICA1Q05084 483 aa25.74■■□□□ 1.71
PSME3-204ENST00000543428 SH2D4AQ9H788 454 aa25.74■■□□□ 1.71
PSME3-204ENST00000543428 SGPL1O95470 568 aa25.73■■□□□ 1.71
PSME3-204ENST00000543428 TFRCP02786 760 aaKnown RBP25.73■■□□□ 1.71
PSME3-204ENST00000543428 PLEKHH3Q7Z736 793 aa25.73■■□□□ 1.71
PSME3-204ENST00000543428 OSBP2Q969R2 916 aa25.73■■□□□ 1.71
PSME3-204ENST00000543428 DEFB118Q96PH6 123 aa25.73■■□□□ 1.71
PSME3-204ENST00000543428 TANGO6Q9C0B7 1094 aa25.73■■□□□ 1.71
PSME3-204ENST00000543428 PORCNQ9H237 461 aa25.73■■□□□ 1.71
PSME3-204ENST00000543428 SMIM22K7EJ46 135 aa25.72■■□□□ 1.71
PSME3-204ENST00000543428 MX1P20591 662 aa25.72■■□□□ 1.71
PSME3-204ENST00000543428 ANKRD45Q5TZF3 282 aa25.72■■□□□ 1.71
PSME3-204ENST00000543428 WDR78Q5VTH9 848 aa25.72■■□□□ 1.71
PSME3-204ENST00000543428 GPR142Q7Z601 462 aa25.72■■□□□ 1.71
PSME3-204ENST00000543428 OTUD7AQ8TE49 926 aaPredicted RBP25.72■■□□□ 1.71
PSME3-204ENST00000543428 APPP05067 770 aa25.71■■□□□ 1.71
PSME3-204ENST00000543428 GNAT2P19087 354 aa25.71■■□□□ 1.71
PSME3-204ENST00000543428 ATP2B2Q01814 1243 aa25.71■■□□□ 1.71
PSME3-204ENST00000543428 GIMAP6Q6P9H5 292 aa25.71■■□□□ 1.71
PSME3-204ENST00000543428 POTEEQ6S8J3 1075 aa25.71■■□□□ 1.71
PSME3-204ENST00000543428 CLEC10AQ8IUN9 316 aa25.71■■□□□ 1.71
PSME3-204ENST00000543428 FSD1Q9BTV5 496 aa25.71■■□□□ 1.71
PSME3-204ENST00000543428 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.71■■□□□ 1.718e-6■□□□□ 10.8
PSME3-204ENST00000543428 HOXC10Q9NYD6 342 aa25.71■■□□□ 1.71
PSME3-204ENST00000543428 PLXNB2O15031 1838 aa25.71■■□□□ 1.71
PSME3-204ENST00000543428 SPDYE16A6NNV3 312 aaPredicted RBP25.7■■□□□ 1.7
PSME3-204ENST00000543428 GSG1L2A8MUP6 293 aa25.7■■□□□ 1.7
PSME3-204ENST00000543428 MINDY4BA8MYZ0 360 aa25.7■■□□□ 1.7
PSME3-204ENST00000543428 GPAA1O43292 621 aa25.7■■□□□ 1.7
PSME3-204ENST00000543428 FARP2O94887 1054 aaPredicted RBP25.7■■□□□ 1.7
PSME3-204ENST00000543428 COG2Q14746 738 aa25.7■■□□□ 1.7
PSME3-204ENST00000543428 LBX2Q6XYB7 198 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms