RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 KIF2CQ99661 725 aa6.54□□□□□ -1.36
MDM2-229ENST00000543046 GINM1Q9NU53 330 aa6.54□□□□□ -1.36
MDM2-229ENST00000543046 ZNRF3Q9ULT6 936 aa6.54□□□□□ -1.36
MDM2-229ENST00000543046 PLAGL2Q9UPG8 496 aa6.54□□□□□ -1.36
MDM2-229ENST00000543046 INPP5FQ9Y2H2 1132 aa6.54□□□□□ -1.36
MDM2-229ENST00000543046 MEIS3P2A8K0S8 358 aa6.53□□□□□ -1.36
MDM2-229ENST00000543046 PRR33A8MZF0 331 aa6.53□□□□□ -1.36
MDM2-229ENST00000543046 PRNPP04156 253 aa6.53□□□□□ -1.36
MDM2-229ENST00000543046 ZNF865P0CJ78 1059 aaPredicted RBP6.53□□□□□ -1.36
MDM2-229ENST00000543046 RAG1P15918 1043 aa6.53□□□□□ -1.36
MDM2-229ENST00000543046 ETV3P41162 512 aa6.53□□□□□ -1.36
MDM2-229ENST00000543046 TNNI2P48788 182 aa6.53□□□□□ -1.36
MDM2-229ENST00000543046 COL9A2Q14055 689 aaPredicted RBP6.53□□□□□ -1.36
MDM2-229ENST00000543046 LRRFIP1Q32MZ4 808 aaKnown RBP6.53□□□□□ -1.36
MDM2-229ENST00000543046 CDCP2Q5VXM1 449 aa6.53□□□□□ -1.36
MDM2-229ENST00000543046 C22orf34Q6ZV56 151 aa6.53□□□□□ -1.36
MDM2-229ENST00000543046 TMEM40Q8WWA1 233 aa6.53□□□□□ -1.36
MDM2-229ENST00000543046 ATG4CQ96DT6 458 aa6.53□□□□□ -1.36
MDM2-229ENST00000543046 COX4I2Q96KJ9 171 aa6.53□□□□□ -1.36
MDM2-229ENST00000543046 ANTXR1Q9H6X2 564 aa6.53□□□□□ -1.36
MDM2-229ENST00000543046 CCDC39Q9UFE4 941 aa6.53□□□□□ -1.36
MDM2-229ENST00000543046 PPT2Q9UMR5 302 aa6.53□□□□□ -1.36
MDM2-229ENST00000543046 EFR3BQ9Y2G0 817 aa6.53□□□□□ -1.36
MDM2-229ENST00000543046 RBAK-RBAKDNI3L0D1 243 aa6.52□□□□□ -1.37
MDM2-229ENST00000543046 RGS13O14921 159 aa6.52□□□□□ -1.37
MDM2-229ENST00000543046 ADAMTS4O75173 837 aa6.52□□□□□ -1.37
MDM2-229ENST00000543046 CBX7O95931 251 aa6.52□□□□□ -1.37
MDM2-229ENST00000543046 IMPDH2P12268 514 aa6.52□□□□□ -1.37
MDM2-229ENST00000543046 GBP1P32455 592 aa6.52□□□□□ -1.37
MDM2-229ENST00000543046 SOX9P48436 509 aa6.52□□□□□ -1.37
MDM2-229ENST00000543046 NKPD1Q17RQ9 610 aa6.52□□□□□ -1.37
MDM2-229ENST00000543046 FBXW10Q5XX13 1052 aa6.52□□□□□ -1.37
MDM2-229ENST00000543046 NLRC3Q7RTR2 1065 aa6.52□□□□□ -1.37
MDM2-229ENST00000543046 VSIG10LQ86VR7 867 aa6.52□□□□□ -1.37
MDM2-229ENST00000543046 SPACA3Q8IXA5 215 aa6.52□□□□□ -1.37
MDM2-229ENST00000543046 MFSD4AQ8N468 514 aa6.52□□□□□ -1.37
MDM2-229ENST00000543046 TNKS2Q9H2K2 1166 aa6.52□□□□□ -1.37
MDM2-229ENST00000543046 CNNM2Q9H8M5 875 aa6.52□□□□□ -1.37
MDM2-229ENST00000543046 ANGEL1Q9UNK9 670 aaKnown RBP6.52□□□□□ -1.37
MDM2-229ENST00000543046 TMEM265A0A087WTH1 108 aa6.51□□□□□ -1.37
MDM2-229ENST00000543046 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
MDM2-229ENST00000543046 WNT11O96014 354 aa6.51□□□□□ -1.37
MDM2-229ENST00000543046 POLR2BP30876 1174 aaKnown RBP6.51□□□□□ -1.37
MDM2-229ENST00000543046 KIR3DL1P43629 444 aa6.51□□□□□ -1.37
MDM2-229ENST00000543046 MISP3Q96FF7 219 aa6.51□□□□□ -1.37
MDM2-229ENST00000543046 HRASLS5Q96KN8 279 aa6.51□□□□□ -1.37
MDM2-229ENST00000543046 KRTAP4-6Q9BYQ5 205 aa6.51□□□□□ -1.37
MDM2-229ENST00000543046 SNX11Q9Y5W9 270 aa6.51□□□□□ -1.37
MDM2-229ENST00000543046 CAPN6Q9Y6Q1 641 aa6.51□□□□□ -1.37
MDM2-229ENST00000543046 FAM155AB1AL88 458 aaPredicted RBP6.5□□□□□ -1.37
MDM2-229ENST00000543046 UBOX5O94941 541 aa6.5□□□□□ -1.37
MDM2-229ENST00000543046 NME1P15531 152 aaKnown RBP6.5□□□□□ -1.37
MDM2-229ENST00000543046 NASPP49321 788 aaPredicted RBP6.5□□□□□ -1.37
MDM2-229ENST00000543046 PRKCQQ04759 706 aa6.5□□□□□ -1.37
MDM2-229ENST00000543046 AOC3Q16853 763 aa6.5□□□□□ -1.37
MDM2-229ENST00000543046 CCDC81Q6ZN84 652 aa6.5□□□□□ -1.37
MDM2-229ENST00000543046 NBPF11Q86T75 865 aa6.5□□□□□ -1.37
MDM2-229ENST00000543046 STK11IPQ8N1F8 1099 aa6.5□□□□□ -1.37
MDM2-229ENST00000543046 BCL7CQ8WUZ0 217 aaPredicted RBP6.5□□□□□ -1.37
MDM2-229ENST00000543046 RNF141Q8WVD5 230 aa6.5□□□□□ -1.37
MDM2-229ENST00000543046 KREMEN1Q96MU8 473 aa6.5□□□□□ -1.37
MDM2-229ENST00000543046 CAPN10Q9HC96 672 aa6.5□□□□□ -1.37
MDM2-229ENST00000543046 VAV3Q9UKW4 847 aa6.5□□□□□ -1.37
MDM2-229ENST00000543046 SLC5A6Q9Y289 635 aa6.5□□□□□ -1.37
MDM2-229ENST00000543046 COL17A1Q9UMD9 1497 aaPredicted RBP6.49□□□□□ -1.37
MDM2-229ENST00000543046 TNFRSF10CO14798 259 aa6.49□□□□□ -1.37
MDM2-229ENST00000543046 CLCN7P51798 805 aa6.49□□□□□ -1.37
MDM2-229ENST00000543046 CHMP4BP1P59074 171 aa6.49□□□□□ -1.37
MDM2-229ENST00000543046 TNK2Q07912 1038 aa6.49□□□□□ -1.37
MDM2-229ENST00000543046 BNIP3Q12983 259 aa6.49□□□□□ -1.37
MDM2-229ENST00000543046 NFXL1Q6ZNB6 911 aa6.49□□□□□ -1.37
MDM2-229ENST00000543046 RBBP8NLQ8NC74 664 aaPredicted RBP6.49□□□□□ -1.37
MDM2-229ENST00000543046 FLCNQ8NFG4 579 aa6.49□□□□□ -1.37
MDM2-229ENST00000543046 SEC16BQ96JE7 1060 aa6.49□□□□□ -1.37
MDM2-229ENST00000543046 Q96M66 194 aa6.49□□□□□ -1.37
MDM2-229ENST00000543046 CCNFP41002 786 aa6.48□□□□□ -1.37
MDM2-229ENST00000543046 GNL2Q13823 731 aaKnown RBP6.48□□□□□ -1.37
MDM2-229ENST00000543046 CDKAL1Q5VV42 579 aa6.48□□□□□ -1.37
MDM2-229ENST00000543046 ZNF574Q6ZN55 896 aaPredicted RBP6.48□□□□□ -1.37
MDM2-229ENST00000543046 WFDC3Q8IUB2 231 aa6.48□□□□□ -1.37
MDM2-229ENST00000543046 VWCEQ96DN2 955 aa6.48□□□□□ -1.37
MDM2-229ENST00000543046 HSPA12BQ96MM6 686 aa6.48□□□□□ -1.37
MDM2-229ENST00000543046 CRBNQ96SW2 442 aa6.48□□□□□ -1.37
MDM2-229ENST00000543046 SLC9A7Q96T83 725 aa6.48□□□□□ -1.37
MDM2-229ENST00000543046 TINF2Q9BSI4 451 aa6.48□□□□□ -1.37
MDM2-229ENST00000543046 ASPNQ9BXN1 380 aa6.48□□□□□ -1.37
MDM2-229ENST00000543046 SRRTQ9BXP5 876 aaKnown RBP6.48□□□□□ -1.37
MDM2-229ENST00000543046 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.48□□□□□ -1.37
MDM2-229ENST00000543046 ST14Q9Y5Y6 855 aa6.48□□□□□ -1.37
MDM2-229ENST00000543046 H3BS24 57 aa6.47□□□□□ -1.37
MDM2-229ENST00000543046 LRRN2O75325 713 aa6.47□□□□□ -1.37
MDM2-229ENST00000543046 ACRP10323 421 aa6.47□□□□□ -1.37
MDM2-229ENST00000543046 ATF4P18848 351 aaPredicted RBP6.47□□□□□ -1.37
MDM2-229ENST00000543046 CD96P40200 585 aa6.47□□□□□ -1.37
MDM2-229ENST00000543046 GP2P55259 537 aaKnown RBP6.47□□□□□ -1.37
MDM2-229ENST00000543046 EIF6P56537 245 aaKnown RBP6.47□□□□□ -1.37
MDM2-229ENST00000543046 INTS3Q68E01 1043 aaKnown RBP6.47□□□□□ -1.37
MDM2-229ENST00000543046 SPRED2Q7Z698 418 aa6.47□□□□□ -1.37
MDM2-229ENST00000543046 LSRQ86X29 649 aaPredicted RBP6.47□□□□□ -1.37
MDM2-229ENST00000543046 TAB3Q8N5C8 712 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms