RNA–Protein interactions for RNA: ENST00000542777.1

DDX11-222, Transcript of DEAD/H-box helicase 11, human

TSL 2

Gene DDX11, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-222	ENST00000542777	USP17L20	D6RJB6	530 aa		19.48	■□□□□ 0.71
DDX11-222	ENST00000542777	POLR3D	P05423	398 aa	Predicted RBP	19.48	■□□□□ 0.71
DDX11-222	ENST00000542777	XRCC5	P13010	732 aa	Known RBP	19.48	■□□□□ 0.71
DDX11-222	ENST00000542777	USP14	P54578	494 aa		19.48	■□□□□ 0.71
DDX11-222	ENST00000542777	USP17L24	Q0WX57	530 aa		19.48	■□□□□ 0.71
DDX11-222	ENST00000542777	SLC9C2	Q5TAH2	1124 aa		19.48	■□□□□ 0.71
DDX11-222	ENST00000542777	POTEE	Q6S8J3	1075 aa		19.48	■□□□□ 0.71
DDX11-222	ENST00000542777	PRO3102	Q9H379	93 aa		19.48	■□□□□ 0.71
DDX11-222	ENST00000542777	HMMR	O75330	724 aa		19.47	■□□□□ 0.71
DDX11-222	ENST00000542777	IFIT2	P09913	472 aa	Known RBP	19.47	■□□□□ 0.71
DDX11-222	ENST00000542777	PDE6A	P16499	860 aa		19.47	■□□□□ 0.71
DDX11-222	ENST00000542777	SHMT1	P34896	483 aa		19.47	■□□□□ 0.71
DDX11-222	ENST00000542777	CATSPERG	Q6ZRH7	1159 aa		19.47	■□□□□ 0.71
DDX11-222	ENST00000542777	GPR142	Q7Z601	462 aa		19.47	■□□□□ 0.71
DDX11-222	ENST00000542777	PLEKHH3	Q7Z736	793 aa		19.47	■□□□□ 0.71
DDX11-222	ENST00000542777	TRMT44	Q8IYL2	757 aa	Known RBP	19.47	■□□□□ 0.71
DDX11-222	ENST00000542777	ACER1	Q8TDN7	264 aa		19.47	■□□□□ 0.71
DDX11-222	ENST00000542777	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	19.47	■□□□□ 0.71
DDX11-222	ENST00000542777	DNAJC2	Q99543	621 aa	Known RBP	19.47	■□□□□ 0.71
DDX11-222	ENST00000542777	CRNKL1	Q9BZJ0	848 aa	Known RBP	19.47	■□□□□ 0.71
DDX11-222	ENST00000542777	KIAA1683	Q9H0B3	1180 aa		19.47	■□□□□ 0.71
DDX11-222	ENST00000542777	BCL11A	Q9H165	835 aa		19.47	■□□□□ 0.71
DDX11-222	ENST00000542777	CWC22	Q9HCG8	908 aa	Known RBP	19.47	■□□□□ 0.71
DDX11-222	ENST00000542777	GOLIM4	O00461	696 aa		19.46	■□□□□ 0.71
DDX11-222	ENST00000542777	PRKAR2A	P13861	404 aa	Known RBP	19.46	■□□□□ 0.71
DDX11-222	ENST00000542777	MORN1	Q5T089	497 aa		19.46	■□□□□ 0.71
DDX11-222	ENST00000542777	MAP3K21	Q5TCX8	1036 aa		19.46	■□□□□ 0.71
DDX11-222	ENST00000542777	USP6NL	Q92738	828 aa		19.46	■□□□□ 0.71
DDX11-222	ENST00000542777	MCM9	Q9NXL9	1143 aa		19.46	■□□□□ 0.71
DDX11-222	ENST00000542777	DDX19B	Q9UMR2	479 aa		19.46	■□□□□ 0.71
DDX11-222	ENST00000542777	COG6	Q9Y2V7	657 aa		19.46	■□□□□ 0.71
DDX11-222	ENST00000542777	RABGAP1	Q9Y3P9	1069 aa		19.46	■□□□□ 0.71
DDX11-222	ENST00000542777	ALPK3	Q96L96	1907 aa		19.46	■□□□□ 0.71
DDX11-222	ENST00000542777	ZNF532	Q9HCE3	1301 aa		19.46	■□□□□ 0.71
DDX11-222	ENST00000542777	NAV1	Q8NEY1	1877 aa		19.45	■□□□□ 0.7
DDX11-222	ENST00000542777	CNMD	O75829	334 aa		19.45	■□□□□ 0.7
DDX11-222	ENST00000542777	ZKSCAN1	P17029	563 aa	Predicted RBP	19.45	■□□□□ 0.7
DDX11-222	ENST00000542777	RGS2	P41220	211 aa		19.45	■□□□□ 0.7
DDX11-222	ENST00000542777	GABPA	Q06546	454 aa		19.45	■□□□□ 0.7
DDX11-222	ENST00000542777	SIRT2	Q8IXJ6	389 aa		19.45	■□□□□ 0.7
DDX11-222	ENST00000542777	NBPF3	Q9H094	633 aa		19.45	■□□□□ 0.7
DDX11-222	ENST00000542777	ZBTB40	Q9NUA8	1239 aa		19.45	■□□□□ 0.7
DDX11-222	ENST00000542777	OGDHL	Q9ULD0	1010 aa		19.45	■□□□□ 0.7
DDX11-222	ENST00000542777	RAB11FIP3	O75154	756 aa		19.44	■□□□□ 0.7
DDX11-222	ENST00000542777	VCAM1	P19320	739 aa		19.44	■□□□□ 0.7
DDX11-222	ENST00000542777	GUCY1A2	P33402	732 aa		19.44	■□□□□ 0.7
DDX11-222	ENST00000542777	MNX1	P50219	401 aa	Predicted RBP	19.44	■□□□□ 0.7
DDX11-222	ENST00000542777	CCNA1	P78396	465 aa		19.44	■□□□□ 0.7
DDX11-222	ENST00000542777	CACNB2	Q08289	660 aa	Predicted RBP	19.44	■□□□□ 0.7
DDX11-222	ENST00000542777	CCL14	Q16627	93 aa		19.44	■□□□□ 0.7
DDX11-222	ENST00000542777	DDX60L	Q5H9U9	1706 aa	Known RBP	19.44	■□□□□ 0.7
DDX11-222	ENST00000542777	TCRBV5S4A2T	A0A5A2	114 aa		19.43	■□□□□ 0.7
DDX11-222	ENST00000542777	EVX2	Q03828	476 aa		19.43	■□□□□ 0.7
DDX11-222	ENST00000542777	SEPT2	Q15019	361 aa		19.43	■□□□□ 0.7
DDX11-222	ENST00000542777	LCORL	Q8N3X6	602 aa		19.43	■□□□□ 0.7
DDX11-222	ENST00000542777	SDR42E1	Q8WUS8	393 aa		19.43	■□□□□ 0.7
DDX11-222	ENST00000542777	EDC3	Q96F86	508 aa	Known RBP	19.43	■□□□□ 0.7
DDX11-222	ENST00000542777	C11orf49	Q9H6J7	331 aa		19.43	■□□□□ 0.7
DDX11-222	ENST00000542777	STAP2	Q9UGK3	403 aa		19.43	■□□□□ 0.7
DDX11-222	ENST00000542777	MPHOSPH10	O00566	681 aa	Known RBP	19.42	■□□□□ 0.7
DDX11-222	ENST00000542777	GLRX3	O76003	335 aa	Known RBP	19.42	■□□□□ 0.7
DDX11-222	ENST00000542777	MAP2K5	Q13163	448 aa		19.42	■□□□□ 0.7
DDX11-222	ENST00000542777	WDR78	Q5VTH9	848 aa		19.42	■□□□□ 0.7
DDX11-222	ENST00000542777	LBX2	Q6XYB7	198 aa		19.42	■□□□□ 0.7
DDX11-222	ENST00000542777	C7orf61	Q8IZ16	206 aa		19.42	■□□□□ 0.7
DDX11-222	ENST00000542777	APBA2	Q99767	749 aa		19.42	■□□□□ 0.7
DDX11-222	ENST00000542777	BOLA2	Q9H3K6	86 aa		19.42	■□□□□ 0.7
DDX11-222	ENST00000542777	RPAP3	Q9H6T3	665 aa	Predicted RBP	19.42	■□□□□ 0.7
DDX11-222	ENST00000542777	DCP1A	Q9NPI6	582 aa	Predicted RBP	19.42	■□□□□ 0.7
DDX11-222	ENST00000542777	CCND3	P30281	292 aa	Predicted RBP	19.41	■□□□□ 0.7
DDX11-222	ENST00000542777	CHMP4B	Q9H444	224 aa	Known RBP	19.41	■□□□□ 0.7
DDX11-222	ENST00000542777	ARMT1	Q9H993	441 aa		19.41	■□□□□ 0.7
DDX11-222	ENST00000542777	PAG1	Q9NWQ8	432 aa		19.41	■□□□□ 0.7
DDX11-222	ENST00000542777	BTBD7	Q9P203	1132 aa		19.41	■□□□□ 0.7
DDX11-222	ENST00000542777		A0A1W2PPC1	479 aa		19.4	■□□□□ 0.7
DDX11-222	ENST00000542777	SLC15A5	A6NIM6	579 aa		19.4	■□□□□ 0.7
DDX11-222	ENST00000542777	SPDYE16	A6NNV3	312 aa	Predicted RBP	19.4	■□□□□ 0.7
DDX11-222	ENST00000542777	CYP2D6	P10635	497 aa		19.4	■□□□□ 0.7
DDX11-222	ENST00000542777	PTPRE	P23469	700 aa		19.4	■□□□□ 0.7
DDX11-222	ENST00000542777		A0A1W2PRG0	241 aa		19.39	■□□□□ 0.69
DDX11-222	ENST00000542777	ATP5J	P18859	108 aa		19.39	■□□□□ 0.69
DDX11-222	ENST00000542777	ADD2	P35612	726 aa		19.39	■□□□□ 0.69
DDX11-222	ENST00000542777	SLFNL1	Q499Z3	407 aa		19.39	■□□□□ 0.69
DDX11-222	ENST00000542777	LHX8	Q68G74	356 aa		19.39	■□□□□ 0.69
DDX11-222	ENST00000542777	SWAP70	Q9UH65	585 aa		19.39	■□□□□ 0.69
DDX11-222	ENST00000542777	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	19.39	■□□□□ 0.69
DDX11-222	ENST00000542777	IVNS1ABP	Q9Y6Y0	642 aa		19.39	■□□□□ 0.69
DDX11-222	ENST00000542777	PRKAB2	O43741	272 aa		19.38	■□□□□ 0.69
DDX11-222	ENST00000542777	MBD4	O95243	580 aa		19.38	■□□□□ 0.69
DDX11-222	ENST00000542777	COG2	Q14746	738 aa		19.38	■□□□□ 0.69
DDX11-222	ENST00000542777	MFSD14C	Q5VZR4	134 aa		19.38	■□□□□ 0.69
DDX11-222	ENST00000542777	TMEM179	Q6ZVK1	233 aa		19.38	■□□□□ 0.69
DDX11-222	ENST00000542777	SLC44A5	Q8NCS7	719 aa		19.38	■□□□□ 0.69
DDX11-222	ENST00000542777	DYNLL2	Q96FJ2	89 aa		19.38	■□□□□ 0.69
DDX11-222	ENST00000542777	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	19.38	■□□□□ 0.69	6e-9	■■■■■ 58.5
DDX11-222	ENST00000542777	ATP8A2	Q9NTI2	1148 aa		19.38	■□□□□ 0.69
DDX11-222	ENST00000542777	HOXC10	Q9NYD6	342 aa		19.38	■□□□□ 0.69
DDX11-222	ENST00000542777	FLRT1	Q9NZU1	646 aa		19.38	■□□□□ 0.69
DDX11-222	ENST00000542777	RCAN3	Q9UKA8	241 aa		19.38	■□□□□ 0.69
DDX11-222	ENST00000542777	MYH8	P13535	1937 aa		19.37	■□□□□ 0.69

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms