RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 TAF1CQ15572 869 aaPredicted RBP16.86■□□□□ 0.29
DDX11-221ENST00000542661 DSCC1Q9BVC3 393 aa16.86■□□□□ 0.29
DDX11-221ENST00000542661 AKR1B1P15121 316 aa16.85■□□□□ 0.29
DDX11-221ENST00000542661 RASA1P20936 1047 aa16.85■□□□□ 0.29
DDX11-221ENST00000542661 GUCY1A2P33402 732 aa16.85■□□□□ 0.29
DDX11-221ENST00000542661 CRHR2Q13324 411 aa16.85■□□□□ 0.29
DDX11-221ENST00000542661 GPAT2Q6NUI2 795 aa16.85■□□□□ 0.29
DDX11-221ENST00000542661 USP17L2Q6R6M4 530 aa16.85■□□□□ 0.29
DDX11-221ENST00000542661 SKAP1Q86WV1 359 aa16.85■□□□□ 0.29
DDX11-221ENST00000542661 FEZ1Q99689 392 aa16.85■□□□□ 0.29
DDX11-221ENST00000542661 KIAA1683Q9H0B3 1180 aa16.85■□□□□ 0.29
DDX11-221ENST00000542661 SH2D4AQ9H788 454 aa16.85■□□□□ 0.29
DDX11-221ENST00000542661 KANSL2Q9H9L4 492 aa16.85■□□□□ 0.29
DDX11-221ENST00000542661 CTNNA3Q9UI47 895 aa16.85■□□□□ 0.29
DDX11-221ENST00000542661 AGTPBP1Q9UPW5 1226 aa16.85■□□□□ 0.29
DDX11-221ENST00000542661 GPR25O00155 361 aa16.84■□□□□ 0.29
DDX11-221ENST00000542661 PCP11498 1178 aaKnown RBP16.84■□□□□ 0.29
DDX11-221ENST00000542661 STK11IPQ8N1F8 1099 aa16.84■□□□□ 0.29
DDX11-221ENST00000542661 PARK7Q99497 189 aaKnown RBP16.84■□□□□ 0.29
DDX11-221ENST00000542661 ARHGEF10LQ9HCE6 1279 aa16.84■□□□□ 0.29
DDX11-221ENST00000542661 PNMA3Q9UL41 463 aa16.84■□□□□ 0.29
DDX11-221ENST00000542661 LOC285556D6RIA3 1793 aa16.83■□□□□ 0.28
DDX11-221ENST00000542661 ZNF213O14771 459 aa16.83■□□□□ 0.28
DDX11-221ENST00000542661 SGSM2O43147 1006 aa16.83■□□□□ 0.28
DDX11-221ENST00000542661 ICA1Q05084 483 aa16.83■□□□□ 0.28
DDX11-221ENST00000542661 PPP4R3BQ5MIZ7 849 aa16.83■□□□□ 0.28
DDX11-221ENST00000542661 CASC1Q6TDU7 716 aa16.83■□□□□ 0.28
DDX11-221ENST00000542661 ORC4O43929 436 aa16.82■□□□□ 0.28
DDX11-221ENST00000542661 TLR2O60603 784 aa16.82■□□□□ 0.28
DDX11-221ENST00000542661 PRDM1O75626 825 aa16.82■□□□□ 0.28
DDX11-221ENST00000542661 FGRP09769 529 aa16.82■□□□□ 0.28
DDX11-221ENST00000542661 TSPY3P0CV98 308 aa16.82■□□□□ 0.28
DDX11-221ENST00000542661 TSPY8P0CW00 308 aa16.82■□□□□ 0.28
DDX11-221ENST00000542661 NT5C2P49902 561 aa16.82■□□□□ 0.28
DDX11-221ENST00000542661 CTDSPL2Q05D32 466 aa16.82■□□□□ 0.28
DDX11-221ENST00000542661 IMMTQ16891 758 aaKnown RBP16.82■□□□□ 0.28
DDX11-221ENST00000542661 ACER1Q8TDN7 264 aa16.82■□□□□ 0.28
DDX11-221ENST00000542661 C12orf42Q96LP6 360 aa16.82■□□□□ 0.28
DDX11-221ENST00000542661 R3HDMLQ9H3Y0 253 aa16.82■□□□□ 0.28
DDX11-221ENST00000542661 RNF41Q9H4P4 317 aaPredicted RBP16.82■□□□□ 0.28
DDX11-221ENST00000542661 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.82■□□□□ 0.28
DDX11-221ENST00000542661 FKTNO75072 461 aa16.81■□□□□ 0.28
DDX11-221ENST00000542661 OSBPP22059 807 aa16.81■□□□□ 0.28
DDX11-221ENST00000542661 TREML2Q5T2D2 321 aa16.81■□□□□ 0.28
DDX11-221ENST00000542661 KIAA1211Q6ZU35 1233 aa16.81■□□□□ 0.28
DDX11-221ENST00000542661 NEDD1Q8NHV4 660 aa16.81■□□□□ 0.28
DDX11-221ENST00000542661 IL25Q9H293 177 aa16.81■□□□□ 0.28
DDX11-221ENST00000542661 EMILIN3Q9NT22 766 aa16.81■□□□□ 0.28
DDX11-221ENST00000542661 TMX2Q9Y320 296 aa16.81■□□□□ 0.28
DDX11-221ENST00000542661 CASP8AP2Q9UKL3 1982 aa16.8■□□□□ 0.28
DDX11-221ENST00000542661 PLIN4Q96Q06 1357 aa16.8■□□□□ 0.28
DDX11-221ENST00000542661 CDC45O75419 566 aa16.8■□□□□ 0.28
DDX11-221ENST00000542661 CAPN15O75808 1086 aa16.8■□□□□ 0.28
DDX11-221ENST00000542661 HOXA7P31268 230 aaPredicted RBP16.8■□□□□ 0.28
DDX11-221ENST00000542661 HAND2P61296 217 aa16.8■□□□□ 0.28
DDX11-221ENST00000542661 TFAP4Q01664 338 aa16.8■□□□□ 0.28
DDX11-221ENST00000542661 AKNAD1Q5T1N1 836 aa16.8■□□□□ 0.28
DDX11-221ENST00000542661 MFSD6Q6ZSS7 791 aa16.8■□□□□ 0.28
DDX11-221ENST00000542661 SIAH1Q8IUQ4 282 aa16.8■□□□□ 0.28
DDX11-221ENST00000542661 ZNF296Q8WUU4 475 aaPredicted RBP16.8■□□□□ 0.28
DDX11-221ENST00000542661 LPAR1Q92633 364 aa16.8■□□□□ 0.28
DDX11-221ENST00000542661 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.8■□□□□ 0.28
DDX11-221ENST00000542661 NYAP2Q9P242 653 aa16.8■□□□□ 0.28
DDX11-221ENST00000542661 U3KPZ7 1027 aaPredicted RBP16.8■□□□□ 0.28
DDX11-221ENST00000542661 GREB1LQ9C091 1923 aaPredicted RBP16.8■□□□□ 0.28
DDX11-221ENST00000542661 IGKV6D-41A0A0C4DH26 115 aa16.79■□□□□ 0.28
DDX11-221ENST00000542661 A0A1W2PRG0 241 aa16.79■□□□□ 0.28
DDX11-221ENST00000542661 TSPY2A6NKD2 308 aa16.79■□□□□ 0.28
DDX11-221ENST00000542661 RANBP6O60518 1105 aaKnown RBP16.79■□□□□ 0.28
DDX11-221ENST00000542661 EEF2P13639 858 aaKnown RBP16.79■□□□□ 0.28
DDX11-221ENST00000542661 IRX3P78415 501 aaPredicted RBP16.79■□□□□ 0.28
DDX11-221ENST00000542661 ATP2B2Q01814 1243 aa16.79■□□□□ 0.28
DDX11-221ENST00000542661 SP3Q02447 781 aa16.79■□□□□ 0.28
DDX11-221ENST00000542661 ZYXQ15942 572 aaKnown RBP16.79■□□□□ 0.28
DDX11-221ENST00000542661 SMCR8Q8TEV9 937 aaPredicted RBP16.79■□□□□ 0.28
DDX11-221ENST00000542661 STAG1Q8WVM7 1258 aa16.79■□□□□ 0.28
DDX11-221ENST00000542661 ESYT1Q9BSJ8 1104 aa16.79■□□□□ 0.28
DDX11-221ENST00000542661 GOPCQ9HD26 462 aa16.79■□□□□ 0.28
DDX11-221ENST00000542661 TOMM22Q9NS69 142 aa16.79■□□□□ 0.28
DDX11-221ENST00000542661 SYNPO2Q9UMS6 1093 aa16.79■□□□□ 0.28
DDX11-221ENST00000542661 LAMA4Q16363 1823 aa16.79■□□□□ 0.28
DDX11-221ENST00000542661 USP17L15C9J2P7 530 aa16.78■□□□□ 0.28
DDX11-221ENST00000542661 USP17L13C9JLJ4 530 aa16.78■□□□□ 0.28
DDX11-221ENST00000542661 USP17L11C9JVI0 530 aa16.78■□□□□ 0.28
DDX11-221ENST00000542661 USP17L18D6R9N7 530 aa16.78■□□□□ 0.28
DDX11-221ENST00000542661 USP17L22D6RA61 530 aa16.78■□□□□ 0.28
DDX11-221ENST00000542661 USP17L17D6RBQ6 530 aa16.78■□□□□ 0.28
DDX11-221ENST00000542661 USP17L19D6RCP7 530 aa16.78■□□□□ 0.28
DDX11-221ENST00000542661 USP17L20D6RJB6 530 aa16.78■□□□□ 0.28
DDX11-221ENST00000542661 TTLL1O95922 423 aa16.78■□□□□ 0.28
DDX11-221ENST00000542661 CYP2C8P10632 490 aa16.78■□□□□ 0.28
DDX11-221ENST00000542661 GCLCP48506 637 aaPredicted RBP16.78■□□□□ 0.28
DDX11-221ENST00000542661 USP17L24Q0WX57 530 aa16.78■□□□□ 0.28
DDX11-221ENST00000542661 DGKZQ13574 1117 aa16.78■□□□□ 0.28
DDX11-221ENST00000542661 ARHGEF6Q15052 776 aa16.78■□□□□ 0.28
DDX11-221ENST00000542661 FAM47AQ5JRC9 791 aa16.78■□□□□ 0.28
DDX11-221ENST00000542661 C17orf99Q6UX52 265 aa16.78■□□□□ 0.28
DDX11-221ENST00000542661 ERO1AQ96HE7 468 aa16.78■□□□□ 0.28
DDX11-221ENST00000542661 ASCC2Q9H1I8 757 aaPredicted RBP16.78■□□□□ 0.28
DDX11-221ENST00000542661 MTMR4Q9NYA4 1195 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms