RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 TMEM67Q5HYA8 995 aa7.07□□□□□ -1.28
MDM2-228ENST00000542502 ZNF746Q6NUN9 644 aaPredicted RBP7.07□□□□□ -1.28
MDM2-228ENST00000542502 LETMD1Q6P1Q0 360 aa7.07□□□□□ -1.28
MDM2-228ENST00000542502 MPZL3Q6UWV2 235 aa7.07□□□□□ -1.28
MDM2-228ENST00000542502 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.07□□□□□ -1.28
MDM2-228ENST00000542502 HID1Q8IV36 788 aa7.07□□□□□ -1.28
MDM2-228ENST00000542502 FAM9AQ8IZU1 332 aaPredicted RBP7.07□□□□□ -1.28
MDM2-228ENST00000542502 WIPI1Q5MNZ9 446 aaPredicted RBP7.06□□□□□ -1.28
MDM2-228ENST00000542502 PRR23BQ6ZRT6 265 aa7.06□□□□□ -1.28
MDM2-228ENST00000542502 THAP5Q7Z6K1 395 aa7.06□□□□□ -1.28
MDM2-228ENST00000542502 RIN3Q8TB24 985 aa7.06□□□□□ -1.28
MDM2-228ENST00000542502 TOX2Q96NM4 488 aa7.06□□□□□ -1.28
MDM2-228ENST00000542502 PRXQ9BXM0 1461 aa7.05□□□□□ -1.28
MDM2-228ENST00000542502 NUP160Q12769 1436 aa7.05□□□□□ -1.28
MDM2-228ENST00000542502 TTBK2Q6IQ55 1244 aa7.05□□□□□ -1.28
MDM2-228ENST00000542502 CCDC120Q96HB5 630 aa7.05□□□□□ -1.28
MDM2-228ENST00000542502 COX4I2Q96KJ9 171 aa7.05□□□□□ -1.28
MDM2-228ENST00000542502 KIAA0586Q9BVV6 1533 aa7.05□□□□□ -1.28
MDM2-228ENST00000542502 CST3P01034 146 aaPredicted RBP7.04□□□□□ -1.28
MDM2-228ENST00000542502 CYP7A1P22680 504 aa7.04□□□□□ -1.28
MDM2-228ENST00000542502 CDK8P49336 464 aa7.04□□□□□ -1.28
MDM2-228ENST00000542502 PRAMEF13Q5VWM6 474 aa7.04□□□□□ -1.28
MDM2-228ENST00000542502 SYDE1Q6ZW31 735 aaPredicted RBP7.04□□□□□ -1.28
MDM2-228ENST00000542502 FRMD6Q96NE9 622 aa7.04□□□□□ -1.28
MDM2-228ENST00000542502 ALPK1Q96QP1 1244 aa7.04□□□□□ -1.28
MDM2-228ENST00000542502 TTF2Q9UNY4 1162 aaKnown RBP7.04□□□□□ -1.28
MDM2-228ENST00000542502 KIF21BO75037 1637 aa7.04□□□□□ -1.28
MDM2-228ENST00000542502 RUSC2Q8N2Y8 1516 aa7.03□□□□□ -1.28
MDM2-228ENST00000542502 CBX7O95931 251 aa7.03□□□□□ -1.28
MDM2-228ENST00000542502 CFPP27918 469 aa7.03□□□□□ -1.28
MDM2-228ENST00000542502 GRK4P32298 578 aa7.03□□□□□ -1.28
MDM2-228ENST00000542502 KIR3DL1P43629 444 aa7.03□□□□□ -1.28
MDM2-228ENST00000542502 RPS26P62854 115 aaKnown RBP7.03□□□□□ -1.28
MDM2-228ENST00000542502 UBE2FQ969M7 185 aa7.03□□□□□ -1.28
MDM2-228ENST00000542502 TACC3Q9Y6A5 838 aa7.03□□□□□ -1.28
MDM2-228ENST00000542502 CLASP1Q7Z460 1538 aa7.02□□□□□ -1.29
MDM2-228ENST00000542502 GFRA2O00451 464 aa7.02□□□□□ -1.29
MDM2-228ENST00000542502 P4HBP07237 508 aaKnown RBP7.02□□□□□ -1.29
MDM2-228ENST00000542502 ANKLE2Q86XL3 938 aa7.02□□□□□ -1.29
MDM2-228ENST00000542502 C1QL4Q86Z23 238 aa7.02□□□□□ -1.29
MDM2-228ENST00000542502 ZSCAN18Q8TBC5 510 aaPredicted RBP7.02□□□□□ -1.29
MDM2-228ENST00000542502 XAGE3Q8WTP9 111 aa7.02□□□□□ -1.29
MDM2-228ENST00000542502 ZSWIM5Q9P217 1185 aa7.02□□□□□ -1.29
MDM2-228ENST00000542502 CTTNBP2Q8WZ74 1663 aa7.01□□□□□ -1.29
MDM2-228ENST00000542502 CEP170Q5SW79 1584 aa7.01□□□□□ -1.29
MDM2-228ENST00000542502 KRT1P04264 644 aa7.01□□□□□ -1.29
MDM2-228ENST00000542502 LDHBP07195 334 aaKnown RBP7.01□□□□□ -1.29
MDM2-228ENST00000542502 TNK2Q07912 1038 aa7.01□□□□□ -1.29
MDM2-228ENST00000542502 LRRC56Q8IYG6 542 aaPredicted RBP7.01□□□□□ -1.29
MDM2-228ENST00000542502 FBXO15Q8NCQ5 510 aaPredicted RBP7.01□□□□□ -1.29
MDM2-228ENST00000542502 SLAMF8Q9P0V8 285 aa7.01□□□□□ -1.29
MDM2-228ENST00000542502 IVNS1ABPQ9Y6Y0 642 aa7.01□□□□□ -1.29
MDM2-228ENST00000542502 IQGAP2Q13576 1575 aa7□□□□□ -1.29
MDM2-228ENST00000542502 GOLGA3Q08378 1498 aa7□□□□□ -1.29
MDM2-228ENST00000542502 C1QTNF9P0C862 333 aa7□□□□□ -1.29
MDM2-228ENST00000542502 LMNB1P20700 586 aa7□□□□□ -1.29
MDM2-228ENST00000542502 EIF4BP23588 611 aaKnown RBP7□□□□□ -1.29
MDM2-228ENST00000542502 GNA15P30679 374 aa7□□□□□ -1.29
MDM2-228ENST00000542502 CCDC85BQ15834 202 aaPredicted RBP7□□□□□ -1.29
MDM2-228ENST00000542502 TMPRSS7Q7RTY8 843 aa7□□□□□ -1.29
MDM2-228ENST00000542502 CDH24Q86UP0 819 aa7□□□□□ -1.29
MDM2-228ENST00000542502 SIAH1Q8IUQ4 282 aa7□□□□□ -1.29
MDM2-228ENST00000542502 MRPL41Q8IXM3 137 aaKnown RBP7□□□□□ -1.29
MDM2-228ENST00000542502 PIWIL2Q8TC59 973 aaKnown RBP7□□□□□ -1.29
MDM2-228ENST00000542502 DIRC2Q96SL1 478 aa7□□□□□ -1.29
MDM2-228ENST00000542502 NSUN3Q9H649 340 aaKnown RBP7□□□□□ -1.29
MDM2-228ENST00000542502 SHROOM2Q13796 1616 aa7□□□□□ -1.29
MDM2-228ENST00000542502 NFIBO00712 420 aa6.99□□□□□ -1.29
MDM2-228ENST00000542502 RAC2P15153 192 aa6.99□□□□□ -1.29
MDM2-228ENST00000542502 SEPT6Q14141 434 aa6.99□□□□□ -1.29
MDM2-228ENST00000542502 LCNL1Q6ZST4 164 aa6.99□□□□□ -1.29
MDM2-228ENST00000542502 TTC6Q86TZ1 520 aa6.99□□□□□ -1.29
MDM2-228ENST00000542502 ABHD4Q8TB40 342 aa6.99□□□□□ -1.29
MDM2-228ENST00000542502 TJP2Q9UDY2 1190 aa6.99□□□□□ -1.29
MDM2-228ENST00000542502 PCDHB5Q9Y5E4 795 aa6.99□□□□□ -1.29
MDM2-228ENST00000542502 DNAJC25-GNG10A0A024R161 153 aa6.98□□□□□ -1.29
MDM2-228ENST00000542502 ESR1P03372 595 aa6.98□□□□□ -1.29
MDM2-228ENST00000542502 ETV3P41162 512 aa6.98□□□□□ -1.29
MDM2-228ENST00000542502 RALGPS1Q5JS13 557 aa6.98□□□□□ -1.29
MDM2-228ENST00000542502 SLC6A19Q695T7 634 aa6.98□□□□□ -1.29
MDM2-228ENST00000542502 AGMOQ6ZNB7 445 aa6.98□□□□□ -1.29
MDM2-228ENST00000542502 TMEM87BQ96K49 555 aa6.98□□□□□ -1.29
MDM2-228ENST00000542502 DPH2Q9BQC3 489 aaPredicted RBP6.98□□□□□ -1.29
MDM2-228ENST00000542502 TMEM59LQ9UK28 342 aa6.98□□□□□ -1.29
MDM2-228ENST00000542502 UGGT2Q9NYU1 1516 aa6.97□□□□□ -1.29
MDM2-228ENST00000542502 RBAK-RBAKDNI3L0D1 243 aa6.97□□□□□ -1.29
MDM2-228ENST00000542502 PGRP06401 933 aa6.97□□□□□ -1.29
MDM2-228ENST00000542502 KCNA1Q09470 495 aa6.97□□□□□ -1.29
MDM2-228ENST00000542502 EPB41L4BQ9H329 900 aa6.97□□□□□ -1.29
MDM2-228ENST00000542502 DCP1AQ9NPI6 582 aaPredicted RBP6.97□□□□□ -1.29
MDM2-228ENST00000542502 ARHGEF11O15085 1522 aa6.96□□□□□ -1.29
MDM2-228ENST00000542502 PRG4Q92954 1404 aaPredicted RBP6.96□□□□□ -1.3
MDM2-228ENST00000542502 KRTAP9-7A8MTY7 169 aa6.96□□□□□ -1.3
MDM2-228ENST00000542502 PRPF40AO75400 957 aaKnown RBP6.96□□□□□ -1.3
MDM2-228ENST00000542502 TMEM253P0C7T8 217 aa6.96□□□□□ -1.3
MDM2-228ENST00000542502 ZSCAN22P10073 491 aaPredicted RBP6.96□□□□□ -1.3
MDM2-228ENST00000542502 LIG3P49916 1009 aa6.96□□□□□ -1.3
MDM2-228ENST00000542502 PDE4BQ07343 736 aa6.96□□□□□ -1.3
MDM2-228ENST00000542502 MCATQ8IVS2 390 aaKnown RBP6.96□□□□□ -1.3
MDM2-228ENST00000542502 MYLIPQ8WY64 445 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms