RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 STK11IPQ8N1F8 1099 aa13.81□□□□□ -0.2
C2CD3-217ENST00000542452 C12orf42Q96LP6 360 aa13.81□□□□□ -0.2
C2CD3-217ENST00000542452 MYH4Q9Y623 1939 aa13.81□□□□□ -0.2
C2CD3-217ENST00000542452 RBBP6Q7Z6E9 1792 aaKnown RBP13.81□□□□□ -0.2
C2CD3-217ENST00000542452 MPHOSPH10O00566 681 aaKnown RBP13.8□□□□□ -0.2
C2CD3-217ENST00000542452 PEX10O60683 326 aa13.8□□□□□ -0.2
C2CD3-217ENST00000542452 GNAT2P19087 354 aa13.8□□□□□ -0.2
C2CD3-217ENST00000542452 LRRFIP1Q32MZ4 808 aaKnown RBP13.8□□□□□ -0.2
C2CD3-217ENST00000542452 KIAA1755Q5JYT7 1200 aa13.8□□□□□ -0.2
C2CD3-217ENST00000542452 POTEEQ6S8J3 1075 aa13.8□□□□□ -0.2
C2CD3-217ENST00000542452 SIAH1Q8IUQ4 282 aa13.8□□□□□ -0.2
C2CD3-217ENST00000542452 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.8□□□□□ -0.2
C2CD3-217ENST00000542452 ASCC2Q9H1I8 757 aaPredicted RBP13.8□□□□□ -0.2
C2CD3-217ENST00000542452 EFCC1Q9HA90 598 aa13.8□□□□□ -0.2
C2CD3-217ENST00000542452 CABP5Q9NP86 173 aa13.8□□□□□ -0.2
C2CD3-217ENST00000542452 PTPN22Q9Y2R2 807 aa13.8□□□□□ -0.2
C2CD3-217ENST00000542452 TACC3Q9Y6A5 838 aa13.8□□□□□ -0.2
C2CD3-217ENST00000542452 CCDC85CA6NKD9 419 aa13.79□□□□□ -0.2
C2CD3-217ENST00000542452 MINDY4BA8MYZ0 360 aa13.79□□□□□ -0.2
C2CD3-217ENST00000542452 TRIM6-TRIM34B2RNG4 842 aa13.79□□□□□ -0.2
C2CD3-217ENST00000542452 C19orf81C9J6K1 198 aa13.79□□□□□ -0.2
C2CD3-217ENST00000542452 PATL2C9JE40 543 aaKnown RBP13.79□□□□□ -0.2
C2CD3-217ENST00000542452 RASA1P20936 1047 aa13.79□□□□□ -0.2
C2CD3-217ENST00000542452 TDO2P48775 406 aa13.79□□□□□ -0.2
C2CD3-217ENST00000542452 PKN2Q16513 984 aaKnown RBP13.79□□□□□ -0.2
C2CD3-217ENST00000542452 USP17L2Q6R6M4 530 aa13.79□□□□□ -0.2
C2CD3-217ENST00000542452 TMEM179Q6ZVK1 233 aa13.79□□□□□ -0.2
C2CD3-217ENST00000542452 RILPL2Q969X0 211 aa13.79□□□□□ -0.2
C2CD3-217ENST00000542452 DDRGK1Q96HY6 314 aa13.79□□□□□ -0.2
C2CD3-217ENST00000542452 TRIM47Q96LD4 638 aa13.79□□□□□ -0.2
C2CD3-217ENST00000542452 FEZ1Q99689 392 aa13.79□□□□□ -0.2
C2CD3-217ENST00000542452 KIAA1683Q9H0B3 1180 aa13.79□□□□□ -0.2
C2CD3-217ENST00000542452 TMOD4Q9NZQ9 345 aa13.79□□□□□ -0.2
C2CD3-217ENST00000542452 PTCH2Q9Y6C5 1203 aa13.79□□□□□ -0.2
C2CD3-217ENST00000542452 VCAM1P19320 739 aa13.78□□□□□ -0.2
C2CD3-217ENST00000542452 HOXA7P31268 230 aaPredicted RBP13.78□□□□□ -0.2
C2CD3-217ENST00000542452 AMOTL1Q8IY63 956 aa13.78□□□□□ -0.2
C2CD3-217ENST00000542452 ANKRD13CQ8N6S4 541 aa13.78□□□□□ -0.2
C2CD3-217ENST00000542452 SMCR8Q8TEV9 937 aaPredicted RBP13.78□□□□□ -0.2
C2CD3-217ENST00000542452 IL25Q9H293 177 aa13.78□□□□□ -0.2
C2CD3-217ENST00000542452 HELLSQ9NRZ9 838 aa13.78□□□□□ -0.2
C2CD3-217ENST00000542452 PNMA3Q9UL41 463 aa13.78□□□□□ -0.2
C2CD3-217ENST00000542452 TAOK2Q9UL54 1235 aa13.78□□□□□ -0.2
C2CD3-217ENST00000542452 COL11A1P12107 1806 aaPredicted RBP13.78□□□□□ -0.2
C2CD3-217ENST00000542452 PRDM1O75626 825 aa13.77□□□□□ -0.21
C2CD3-217ENST00000542452 APPP05067 770 aa13.77□□□□□ -0.21
C2CD3-217ENST00000542452 SDSP20132 328 aa13.77□□□□□ -0.21
C2CD3-217ENST00000542452 OSBPP22059 807 aa13.77□□□□□ -0.21
C2CD3-217ENST00000542452 PSMC4P43686 418 aa13.77□□□□□ -0.21
C2CD3-217ENST00000542452 ICA1Q05084 483 aa13.77□□□□□ -0.21
C2CD3-217ENST00000542452 PPARAQ07869 468 aa13.77□□□□□ -0.21
C2CD3-217ENST00000542452 FAM110CQ1W6H9 321 aa13.77□□□□□ -0.21
C2CD3-217ENST00000542452 TTC22Q5TAA0 569 aa13.77□□□□□ -0.21
C2CD3-217ENST00000542452 SKAP1Q86WV1 359 aa13.77□□□□□ -0.21
C2CD3-217ENST00000542452 P2RX7Q99572 595 aaKnown RBP13.77□□□□□ -0.21
C2CD3-217ENST00000542452 NAPBQ9H115 298 aa13.77□□□□□ -0.21
C2CD3-217ENST00000542452 TXNRD2Q9NNW7 524 aa13.77□□□□□ -0.21
C2CD3-217ENST00000542452 PLIN4Q96Q06 1357 aa13.76□□□□□ -0.21
C2CD3-217ENST00000542452 CCDC171Q6TFL3 1326 aa13.76□□□□□ -0.21
C2CD3-217ENST00000542452 IGKV6D-41A0A0C4DH26 115 aa13.76□□□□□ -0.21
C2CD3-217ENST00000542452 CNMDO75829 334 aa13.76□□□□□ -0.21
C2CD3-217ENST00000542452 SOX10P56693 466 aa13.76□□□□□ -0.21
C2CD3-217ENST00000542452 HERVK_113P62684 666 aa13.76□□□□□ -0.21
C2CD3-217ENST00000542452 IRX3P78415 501 aaPredicted RBP13.76□□□□□ -0.21
C2CD3-217ENST00000542452 PABPC4Q13310 644 aaKnown RBP eCLIP13.76□□□□□ -0.21
C2CD3-217ENST00000542452 MCMDC2Q4G0Z9 681 aa13.76□□□□□ -0.21
C2CD3-217ENST00000542452 CCDC17Q96LX7 622 aa13.76□□□□□ -0.21
C2CD3-217ENST00000542452 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.76□□□□□ -0.21
C2CD3-217ENST00000542452 USP14P54578 494 aa13.75□□□□□ -0.21
C2CD3-217ENST00000542452 PRKCZQ05513 592 aa13.75□□□□□ -0.21
C2CD3-217ENST00000542452 CTDSPL2Q05D32 466 aa13.75□□□□□ -0.21
C2CD3-217ENST00000542452 KIF22Q14807 665 aa13.75□□□□□ -0.21
C2CD3-217ENST00000542452 CATSPERGQ6ZRH7 1159 aa13.75□□□□□ -0.21
C2CD3-217ENST00000542452 RPAP3Q9H6T3 665 aaPredicted RBP13.75□□□□□ -0.21
C2CD3-217ENST00000542452 INCENPQ9NQS7 918 aa13.75□□□□□ -0.21
C2CD3-217ENST00000542452 MORF4L1Q9UBU8 362 aa13.75□□□□□ -0.21
C2CD3-217ENST00000542452 GABRQQ9UN88 632 aa13.75□□□□□ -0.21
C2CD3-217ENST00000542452 TMX2Q9Y320 296 aa13.75□□□□□ -0.21
C2CD3-217ENST00000542452 ZMYM6O95789 1325 aa13.74□□□□□ -0.21
C2CD3-217ENST00000542452 MYPNQ86TC9 1320 aa13.74□□□□□ -0.21
C2CD3-217ENST00000542452 SPDYE16A6NNV3 312 aaPredicted RBP13.74□□□□□ -0.21
C2CD3-217ENST00000542452 FMNL1O95466 1100 aaPredicted RBP13.74□□□□□ -0.21
C2CD3-217ENST00000542452 HSPD1P10809 573 aaKnown RBP13.74□□□□□ -0.21
C2CD3-217ENST00000542452 EEF2P13639 858 aaKnown RBP13.74□□□□□ -0.21
C2CD3-217ENST00000542452 FCGRTP55899 365 aa13.74□□□□□ -0.21
C2CD3-217ENST00000542452 TICAM2Q86XR7 235 aa13.74□□□□□ -0.21
C2CD3-217ENST00000542452 NKX2-3Q8TAU0 364 aa13.74□□□□□ -0.21
C2CD3-217ENST00000542452 ARMC5Q96C12 935 aa13.74□□□□□ -0.21
C2CD3-217ENST00000542452 NACAP1Q9BZK3 213 aa13.74□□□□□ -0.21
C2CD3-217ENST00000542452 NBPF3Q9H094 633 aa13.74□□□□□ -0.21
C2CD3-217ENST00000542452 RBPJLQ9UBG7 517 aa13.74□□□□□ -0.21
C2CD3-217ENST00000542452 SRRDQ9UH36 339 aa13.74□□□□□ -0.21
C2CD3-217ENST00000542452 USP17L15C9J2P7 530 aa13.73□□□□□ -0.21
C2CD3-217ENST00000542452 USP17L13C9JLJ4 530 aa13.73□□□□□ -0.21
C2CD3-217ENST00000542452 USP17L11C9JVI0 530 aa13.73□□□□□ -0.21
C2CD3-217ENST00000542452 USP17L18D6R9N7 530 aa13.73□□□□□ -0.21
C2CD3-217ENST00000542452 USP17L22D6RA61 530 aa13.73□□□□□ -0.21
C2CD3-217ENST00000542452 USP17L17D6RBQ6 530 aa13.73□□□□□ -0.21
C2CD3-217ENST00000542452 USP17L19D6RCP7 530 aa13.73□□□□□ -0.21
C2CD3-217ENST00000542452 USP17L20D6RJB6 530 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms