RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 SLC44A5Q8NCS7 719 aa16.4■□□□□ 0.22
TNFSF13B-206ENST00000542136 ZNF296Q8WUU4 475 aaPredicted RBP16.4■□□□□ 0.22
TNFSF13B-206ENST00000542136 PARK7Q99497 189 aaKnown RBP16.4■□□□□ 0.22
TNFSF13B-206ENST00000542136 DSCC1Q9BVC3 393 aa16.4■□□□□ 0.22
TNFSF13B-206ENST00000542136 R3HDMLQ9H3Y0 253 aa16.4■□□□□ 0.22
TNFSF13B-206ENST00000542136 MKNK2Q9HBH9 465 aa16.4■□□□□ 0.22
TNFSF13B-206ENST00000542136 TMOD4Q9NZQ9 345 aa16.4■□□□□ 0.22
TNFSF13B-206ENST00000542136 RASA1P20936 1047 aa16.39■□□□□ 0.21
TNFSF13B-206ENST00000542136 CHMLP26374 656 aa16.39■□□□□ 0.21
TNFSF13B-206ENST00000542136 HMGCS2P54868 508 aa16.39■□□□□ 0.21
TNFSF13B-206ENST00000542136 MTMR2Q13614 643 aa16.39■□□□□ 0.21
TNFSF13B-206ENST00000542136 SEPT2Q15019 361 aa16.39■□□□□ 0.21
TNFSF13B-206ENST00000542136 ARHGEF6Q15052 776 aa16.39■□□□□ 0.21
TNFSF13B-206ENST00000542136 SHROOM1Q2M3G4 852 aaPredicted RBP16.39■□□□□ 0.21
TNFSF13B-206ENST00000542136 VPS53Q5VIR6 699 aa16.39■□□□□ 0.21
TNFSF13B-206ENST00000542136 GADL1Q6ZQY3 521 aa16.39■□□□□ 0.21
TNFSF13B-206ENST00000542136 SH2D4AQ9H788 454 aa16.39■□□□□ 0.21
TNFSF13B-206ENST00000542136 PNMA3Q9UL41 463 aa16.39■□□□□ 0.21
TNFSF13B-206ENST00000542136 SYNPO2Q9UMS6 1093 aa16.39■□□□□ 0.21
TNFSF13B-206ENST00000542136 LOC285556D6RIA3 1793 aa16.38■□□□□ 0.21
TNFSF13B-206ENST00000542136 SMIM22K7EJ46 135 aa16.38■□□□□ 0.21
TNFSF13B-206ENST00000542136 MPHOSPH10O00566 681 aaKnown RBP16.38■□□□□ 0.21
TNFSF13B-206ENST00000542136 SP3Q02447 781 aa16.38■□□□□ 0.21
TNFSF13B-206ENST00000542136 PKN2Q16513 984 aaKnown RBP16.38■□□□□ 0.21
TNFSF13B-206ENST00000542136 PPP4R3BQ5MIZ7 849 aa16.38■□□□□ 0.21
TNFSF13B-206ENST00000542136 C17orf99Q6UX52 265 aa16.38■□□□□ 0.21
TNFSF13B-206ENST00000542136 ZNF444Q8N0Y2 327 aaPredicted RBP16.38■□□□□ 0.21
TNFSF13B-206ENST00000542136 EMILIN3Q9NT22 766 aa16.38■□□□□ 0.21
TNFSF13B-206ENST00000542136 ADGRA2Q96PE1 1338 aa16.38■□□□□ 0.21
TNFSF13B-206ENST00000542136 MYH8P13535 1937 aa16.37■□□□□ 0.21
TNFSF13B-206ENST00000542136 ORC4O43929 436 aa16.37■□□□□ 0.21
TNFSF13B-206ENST00000542136 AKR1B1P15121 316 aa16.37■□□□□ 0.21
TNFSF13B-206ENST00000542136 GCLCP48506 637 aaPredicted RBP16.37■□□□□ 0.21
TNFSF13B-206ENST00000542136 SIAH1Q8IUQ4 282 aa16.37■□□□□ 0.21
TNFSF13B-206ENST00000542136 LPAR1Q92633 364 aa16.37■□□□□ 0.21
TNFSF13B-206ENST00000542136 ERO1AQ96HE7 468 aa16.37■□□□□ 0.21
TNFSF13B-206ENST00000542136 ARHGEF10LQ9HCE6 1279 aa16.37■□□□□ 0.21
TNFSF13B-206ENST00000542136 NYAP2Q9P242 653 aa16.37■□□□□ 0.21
TNFSF13B-206ENST00000542136 CTNNA3Q9UI47 895 aa16.37■□□□□ 0.21
TNFSF13B-206ENST00000542136 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.37■□□□□ 0.21
TNFSF13B-206ENST00000542136 TMX2Q9Y320 296 aa16.37■□□□□ 0.21
TNFSF13B-206ENST00000542136 GNRH1P01148 92 aa16.36■□□□□ 0.21
TNFSF13B-206ENST00000542136 OSBPP22059 807 aa16.36■□□□□ 0.21
TNFSF13B-206ENST00000542136 TREML2Q5T2D2 321 aa16.36■□□□□ 0.21
TNFSF13B-206ENST00000542136 CTU1Q7Z7A3 348 aaKnown RBP16.36■□□□□ 0.21
TNFSF13B-206ENST00000542136 NEDD1Q8NHV4 660 aa16.36■□□□□ 0.21
TNFSF13B-206ENST00000542136 MKL1Q969V6 931 aa16.36■□□□□ 0.21
TNFSF13B-206ENST00000542136 FEZ1Q99689 392 aa16.36■□□□□ 0.21
TNFSF13B-206ENST00000542136 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.36■□□□□ 0.21
TNFSF13B-206ENST00000542136 CASP8AP2Q9UKL3 1982 aa16.36■□□□□ 0.21
TNFSF13B-206ENST00000542136 PLIN4Q96Q06 1357 aa16.36■□□□□ 0.21
TNFSF13B-206ENST00000542136 IGKV6D-41A0A0C4DH26 115 aa16.35■□□□□ 0.21
TNFSF13B-206ENST00000542136 BCRP11274 1271 aa16.35■□□□□ 0.21
TNFSF13B-206ENST00000542136 ICA1Q05084 483 aa16.35■□□□□ 0.21
TNFSF13B-206ENST00000542136 ACER1Q8TDN7 264 aa16.35■□□□□ 0.21
TNFSF13B-206ENST00000542136 GTF3C2Q8WUA4 911 aaPredicted RBP16.35■□□□□ 0.21
TNFSF13B-206ENST00000542136 ASCC2Q9H1I8 757 aaPredicted RBP16.35■□□□□ 0.21
TNFSF13B-206ENST00000542136 GREB1LQ9C091 1923 aaPredicted RBP16.35■□□□□ 0.21
TNFSF13B-206ENST00000542136 A0A1W2PRG0 241 aa16.34■□□□□ 0.21
TNFSF13B-206ENST00000542136 USP17L15C9J2P7 530 aa16.34■□□□□ 0.21
TNFSF13B-206ENST00000542136 USP17L13C9JLJ4 530 aa16.34■□□□□ 0.21
TNFSF13B-206ENST00000542136 USP17L11C9JVI0 530 aa16.34■□□□□ 0.21
TNFSF13B-206ENST00000542136 USP17L18D6R9N7 530 aa16.34■□□□□ 0.21
TNFSF13B-206ENST00000542136 USP17L22D6RA61 530 aa16.34■□□□□ 0.21
TNFSF13B-206ENST00000542136 USP17L17D6RBQ6 530 aa16.34■□□□□ 0.21
TNFSF13B-206ENST00000542136 USP17L19D6RCP7 530 aa16.34■□□□□ 0.21
TNFSF13B-206ENST00000542136 USP17L20D6RJB6 530 aa16.34■□□□□ 0.21
TNFSF13B-206ENST00000542136 SGSM2O43147 1006 aa16.34■□□□□ 0.21
TNFSF13B-206ENST00000542136 EEF2P13639 858 aaKnown RBP16.34■□□□□ 0.21
TNFSF13B-206ENST00000542136 USP17L24Q0WX57 530 aa16.34■□□□□ 0.21
TNFSF13B-206ENST00000542136 RNF41Q9H4P4 317 aaPredicted RBP16.34■□□□□ 0.21
TNFSF13B-206ENST00000542136 ZNF213O14771 459 aa16.33■□□□□ 0.2
TNFSF13B-206ENST00000542136 CYP2C8P10632 490 aa16.33■□□□□ 0.2
TNFSF13B-206ENST00000542136 IRX3P78415 501 aaPredicted RBP16.33■□□□□ 0.2
TNFSF13B-206ENST00000542136 KIF22Q14807 665 aa16.33■□□□□ 0.2
TNFSF13B-206ENST00000542136 AKNAD1Q5T1N1 836 aa16.33■□□□□ 0.2
TNFSF13B-206ENST00000542136 LBX2Q6XYB7 198 aa16.33■□□□□ 0.2
TNFSF13B-206ENST00000542136 CATSPERGQ6ZRH7 1159 aa16.33■□□□□ 0.2
TNFSF13B-206ENST00000542136 TNS4Q8IZW8 715 aa16.33■□□□□ 0.2
TNFSF13B-206ENST00000542136 SMCR8Q8TEV9 937 aaPredicted RBP16.33■□□□□ 0.2
TNFSF13B-206ENST00000542136 STAG1Q8WVM7 1258 aa16.33■□□□□ 0.2
TNFSF13B-206ENST00000542136 VCPKMTQ9H867 229 aa16.33■□□□□ 0.2
TNFSF13B-206ENST00000542136 MTMR4Q9NYA4 1195 aa16.33■□□□□ 0.2
TNFSF13B-206ENST00000542136 TSPY3P0CV98 308 aa16.32■□□□□ 0.2
TNFSF13B-206ENST00000542136 TSPY8P0CW00 308 aa16.32■□□□□ 0.2
TNFSF13B-206ENST00000542136 VCAM1P19320 739 aa16.32■□□□□ 0.2
TNFSF13B-206ENST00000542136 NOVP48745 357 aa16.32■□□□□ 0.2
TNFSF13B-206ENST00000542136 LACTBP83111 547 aaPredicted RBP16.32■□□□□ 0.2
TNFSF13B-206ENST00000542136 TFAP4Q01664 338 aa16.32■□□□□ 0.2
TNFSF13B-206ENST00000542136 CTDSPL2Q05D32 466 aa16.32■□□□□ 0.2
TNFSF13B-206ENST00000542136 IMMTQ16891 758 aaKnown RBP16.32■□□□□ 0.2
TNFSF13B-206ENST00000542136 FAM110CQ1W6H9 321 aa16.32■□□□□ 0.2
TNFSF13B-206ENST00000542136 MFSD6Q6ZSS7 791 aa16.32■□□□□ 0.2
TNFSF13B-206ENST00000542136 GOPCQ9HD26 462 aa16.32■□□□□ 0.2
TNFSF13B-206ENST00000542136 TCP11L1Q9NUJ3 509 aa16.32■□□□□ 0.2
TNFSF13B-206ENST00000542136 MORF4L1Q9UBU8 362 aa16.32■□□□□ 0.2
TNFSF13B-206ENST00000542136 MYPNQ86TC9 1320 aa16.31■□□□□ 0.2
TNFSF13B-206ENST00000542136 PRDM1O75626 825 aa16.31■□□□□ 0.2
TNFSF13B-206ENST00000542136 TTLL1O95922 423 aa16.31■□□□□ 0.2
TNFSF13B-206ENST00000542136 PRMT2P55345 433 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms