RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 CYP7A1P22680 504 aa14.96□□□□□ -0.01
SNHG1-216ENST00000541416 CCND3P30281 292 aaPredicted RBP14.96□□□□□ -0.01
SNHG1-216ENST00000541416 ATP2B2Q01814 1243 aa14.96□□□□□ -0.01
SNHG1-216ENST00000541416 CCL14Q16627 93 aa14.96□□□□□ -0.01
SNHG1-216ENST00000541416 LRRC26Q2I0M4 334 aa14.96□□□□□ -0.01
SNHG1-216ENST00000541416 TTC6Q86TZ1 520 aa14.96□□□□□ -0.01
SNHG1-216ENST00000541416 CDK5RAP2Q96SN8 1893 aa14.96□□□□□ -0.01
SNHG1-216ENST00000541416 SERPINB13Q9UIV8 391 aa14.96□□□□□ -0.01
SNHG1-216ENST00000541416 PEX10O60683 326 aa14.95□□□□□ -0.02
SNHG1-216ENST00000541416 SURF6O75683 361 aaKnown RBP14.95□□□□□ -0.02
SNHG1-216ENST00000541416 CNGA1P29973 690 aa14.95□□□□□ -0.02
SNHG1-216ENST00000541416 JAG1P78504 1218 aa14.95□□□□□ -0.02
SNHG1-216ENST00000541416 MDM2Q00987 491 aaPredicted RBP14.95□□□□□ -0.02
SNHG1-216ENST00000541416 RAB3GAP1Q15042 981 aa14.95□□□□□ -0.02
SNHG1-216ENST00000541416 ZYXQ15942 572 aaKnown RBP14.95□□□□□ -0.02
SNHG1-216ENST00000541416 CERKLQ49MI3 558 aaPredicted RBP14.95□□□□□ -0.02
SNHG1-216ENST00000541416 ADGRA1Q86SQ6 560 aa14.95□□□□□ -0.02
SNHG1-216ENST00000541416 LPAR1Q92633 364 aa14.95□□□□□ -0.02
SNHG1-216ENST00000541416 DBNDD2Q9BQY9 259 aa14.95□□□□□ -0.02
SNHG1-216ENST00000541416 SENP6Q9GZR1 1112 aaPredicted RBP14.95□□□□□ -0.02
SNHG1-216ENST00000541416 EHD4Q9H223 541 aa14.95□□□□□ -0.02
SNHG1-216ENST00000541416 IDH1O75874 414 aaKnown RBP14.94□□□□□ -0.02
SNHG1-216ENST00000541416 PTPREP23469 700 aa14.94□□□□□ -0.02
SNHG1-216ENST00000541416 ZAP70P43403 619 aa14.94□□□□□ -0.02
SNHG1-216ENST00000541416 ABCB5Q2M3G0 1257 aa14.94□□□□□ -0.02
SNHG1-216ENST00000541416 FAM109BQ6ICB4 259 aaPredicted RBP14.94□□□□□ -0.02
SNHG1-216ENST00000541416 TATDN1Q6P1N9 297 aa14.94□□□□□ -0.02
SNHG1-216ENST00000541416 CATSPERGQ6ZRH7 1159 aa14.94□□□□□ -0.02
SNHG1-216ENST00000541416 KIAA1683Q9H0B3 1180 aa14.94□□□□□ -0.02
SNHG1-216ENST00000541416 DDX20Q9UHI6 824 aaKnown RBP14.94□□□□□ -0.02
SNHG1-216ENST00000541416 MYH1P12882 1939 aa14.94□□□□□ -0.02
SNHG1-216ENST00000541416 DNM1LO00429 736 aa14.93□□□□□ -0.02
SNHG1-216ENST00000541416 HOXC6P09630 235 aa14.93□□□□□ -0.02
SNHG1-216ENST00000541416 MAP3K12Q12852 859 aa14.93□□□□□ -0.02
SNHG1-216ENST00000541416 POLA2Q14181 598 aa14.93□□□□□ -0.02
SNHG1-216ENST00000541416 LBX2Q6XYB7 198 aa14.93□□□□□ -0.02
SNHG1-216ENST00000541416 ARRDC4Q8NCT1 418 aa14.93□□□□□ -0.02
SNHG1-216ENST00000541416 SSH3Q8TE77 659 aa14.93□□□□□ -0.02
SNHG1-216ENST00000541416 CLUAP1Q96AJ1 413 aa14.93□□□□□ -0.02
SNHG1-216ENST00000541416 SLC5A4Q9NY91 659 aa14.93□□□□□ -0.02
SNHG1-216ENST00000541416 STRNO43815 780 aa14.92□□□□□ -0.02
SNHG1-216ENST00000541416 VCAM1P19320 739 aa14.92□□□□□ -0.02
SNHG1-216ENST00000541416 DYNLL1P63167 89 aaKnown RBP14.92□□□□□ -0.02
SNHG1-216ENST00000541416 GRB14Q14449 540 aa14.92□□□□□ -0.02
SNHG1-216ENST00000541416 SHROOM1Q2M3G4 852 aaPredicted RBP14.92□□□□□ -0.02
SNHG1-216ENST00000541416 ZKSCAN2Q63HK3 967 aa14.92□□□□□ -0.02
SNHG1-216ENST00000541416 DPP9Q86TI2 863 aa14.92□□□□□ -0.02
SNHG1-216ENST00000541416 MAGEB6Q8N7X4 407 aa14.92□□□□□ -0.02
SNHG1-216ENST00000541416 MIGA1Q8NAN2 632 aa14.92□□□□□ -0.02
SNHG1-216ENST00000541416 PIH1D3Q9NQM4 214 aaKnown RBP14.92□□□□□ -0.02
SNHG1-216ENST00000541416 FRMPD3Q5JV73 1810 aa14.92□□□□□ -0.02
SNHG1-216ENST00000541416 KBTBD13C9JR72 458 aa14.91□□□□□ -0.02
SNHG1-216ENST00000541416 ATP8B2P98198 1209 aa14.91□□□□□ -0.02
SNHG1-216ENST00000541416 ZNF697Q5TEC3 545 aa14.91□□□□□ -0.02
SNHG1-216ENST00000541416 HOXC10Q9NYD6 342 aa14.91□□□□□ -0.02
SNHG1-216ENST00000541416 NDUFB9Q9Y6M9 179 aa14.91□□□□□ -0.02
SNHG1-216ENST00000541416 POTEB2H3BUK9 544 aa14.9□□□□□ -0.02
SNHG1-216ENST00000541416 CNMDO75829 334 aa14.9□□□□□ -0.02
SNHG1-216ENST00000541416 POLR3DP05423 398 aaPredicted RBP14.9□□□□□ -0.02
SNHG1-216ENST00000541416 ATN1P54259 1190 aaPredicted RBP14.9□□□□□ -0.02
SNHG1-216ENST00000541416 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.9□□□□□ -0.02
SNHG1-216ENST00000541416 FTSJ3Q8IY81 847 aaKnown RBP14.9□□□□□ -0.02
SNHG1-216ENST00000541416 TMEM57Q8N5G2 664 aa14.9□□□□□ -0.02
SNHG1-216ENST00000541416 RPAP3Q9H6T3 665 aaPredicted RBP14.9□□□□□ -0.02
SNHG1-216ENST00000541416 DBNLQ9UJU6 430 aaKnown RBP14.9□□□□□ -0.02
SNHG1-216ENST00000541416 MYO5AQ9Y4I1 1855 aaKnown RBP14.9□□□□□ -0.02
SNHG1-216ENST00000541416 CUL9Q8IWT3 2517 aa14.89□□□□□ -0.03
SNHG1-216ENST00000541416 SPDYE16A6NNV3 312 aaPredicted RBP14.89□□□□□ -0.03
SNHG1-216ENST00000541416 BCAR3O75815 825 aa14.89□□□□□ -0.03
SNHG1-216ENST00000541416 CYP2C19P33261 490 aa14.89□□□□□ -0.03
SNHG1-216ENST00000541416 RTP1P59025 263 aa14.89□□□□□ -0.03
SNHG1-216ENST00000541416 COG2Q14746 738 aa14.89□□□□□ -0.03
SNHG1-216ENST00000541416 TTF1Q15361 905 aaPredicted RBP14.89□□□□□ -0.03
SNHG1-216ENST00000541416 OLFML2BQ68BL8 750 aa14.89□□□□□ -0.03
SNHG1-216ENST00000541416 POTEEQ6S8J3 1075 aa14.89□□□□□ -0.03
SNHG1-216ENST00000541416 ERC1Q8IUD2 1116 aa14.89□□□□□ -0.03
SNHG1-216ENST00000541416 CCDC8Q9H0W5 538 aaPredicted RBP14.89□□□□□ -0.03
SNHG1-216ENST00000541416 FLRT1Q9NZU1 646 aa14.89□□□□□ -0.03
SNHG1-216ENST00000541416 NOP58Q9Y2X3 529 aaKnown RBP14.89□□□□□ -0.03
SNHG1-216ENST00000541416 MPHOSPH10O00566 681 aaKnown RBP14.88□□□□□ -0.03
SNHG1-216ENST00000541416 MB21D1Q8N884 522 aa14.88□□□□□ -0.03
SNHG1-216ENST00000541416 SHCBP1Q8NEM2 672 aa14.88□□□□□ -0.03
SNHG1-216ENST00000541416 ACER1Q8TDN7 264 aa14.88□□□□□ -0.03
SNHG1-216ENST00000541416 CRNKL1Q9BZJ0 848 aaKnown RBP14.88□□□□□ -0.03
SNHG1-216ENST00000541416 TANGO6Q9C0B7 1094 aa14.88□□□□□ -0.03
SNHG1-216ENST00000541416 BTBD7Q9P203 1132 aa14.88□□□□□ -0.03
SNHG1-216ENST00000541416 ATP11BQ9Y2G3 1177 aa14.88□□□□□ -0.03
SNHG1-216ENST00000541416 EYSQ5T1H1 3165 aa14.87□□□□□ -0.03
SNHG1-216ENST00000541416 MAGEB6P1A0A0J9YX57 407 aa14.87□□□□□ -0.03
SNHG1-216ENST00000541416 SEPT4O43236 478 aa14.87□□□□□ -0.03
SNHG1-216ENST00000541416 CYBAP13498 195 aa14.87□□□□□ -0.03
SNHG1-216ENST00000541416 ADORA2AP29274 412 aa14.87□□□□□ -0.03
SNHG1-216ENST00000541416 SHMT1P34896 483 aa14.87□□□□□ -0.03
SNHG1-216ENST00000541416 NPLOC4Q8TAT6 608 aa14.87□□□□□ -0.03
SNHG1-216ENST00000541416 SPATC1LQ9H0A9 340 aa14.87□□□□□ -0.03
SNHG1-216ENST00000541416 MROH8Q9H579 483 aa14.87□□□□□ -0.03
SNHG1-216ENST00000541416 SH2D4AQ9H788 454 aa14.87□□□□□ -0.03
SNHG1-216ENST00000541416 CCER2I3L3R5 266 aa14.86□□□□□ -0.03
SNHG1-216ENST00000541416 SEPT2Q15019 361 aa14.86□□□□□ -0.03
SNHG1-216ENST00000541416 HSP90AB4PQ58FF6 505 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms