RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 SLFN14P0C7P3 912 aa7.35□□□□□ -1.23
RAP1B-224ENST00000541216 GBP2P32456 591 aaPredicted RBP7.35□□□□□ -1.23
RAP1B-224ENST00000541216 CDK8P49336 464 aa7.35□□□□□ -1.23
RAP1B-224ENST00000541216 CAMK2GQ13555 558 aaPredicted RBP7.35□□□□□ -1.23
RAP1B-224ENST00000541216 PWP1Q13610 501 aa7.35□□□□□ -1.23
RAP1B-224ENST00000541216 CCDC84Q86UT8 332 aaPredicted RBP7.35□□□□□ -1.23
RAP1B-224ENST00000541216 RELL1Q8IUW5 271 aa7.35□□□□□ -1.23
RAP1B-224ENST00000541216 RNF34Q969K3 372 aa7.35□□□□□ -1.23
RAP1B-224ENST00000541216 BORCS6Q96GS4 357 aa7.35□□□□□ -1.23
RAP1B-224ENST00000541216 EPB41L4BQ9H329 900 aa7.35□□□□□ -1.23
RAP1B-224ENST00000541216 ZCCHC4Q9H5U6 513 aa7.35□□□□□ -1.23
RAP1B-224ENST00000541216 DCP1AQ9NPI6 582 aaPredicted RBP7.35□□□□□ -1.23
RAP1B-224ENST00000541216 FAM221AA4D161 298 aa7.34□□□□□ -1.23
RAP1B-224ENST00000541216 NTF4P34130 210 aa7.34□□□□□ -1.23
RAP1B-224ENST00000541216 ERVK-24P63145 666 aa7.34□□□□□ -1.23
RAP1B-224ENST00000541216 INPP5AQ14642 412 aa7.34□□□□□ -1.23
RAP1B-224ENST00000541216 ACSBG1Q96GR2 724 aa7.34□□□□□ -1.23
RAP1B-224ENST00000541216 FANCD2OSQ96PS1 177 aa7.34□□□□□ -1.23
RAP1B-224ENST00000541216 ADAMTS1Q9UHI8 967 aa7.34□□□□□ -1.23
RAP1B-224ENST00000541216 PCOLCE2Q9UKZ9 415 aa7.34□□□□□ -1.23
RAP1B-224ENST00000541216 PCDHA4Q9UN74 947 aa7.34□□□□□ -1.23
RAP1B-224ENST00000541216 MINDY4BA8MYZ0 360 aa7.33□□□□□ -1.24
RAP1B-224ENST00000541216 GFRA2O00451 464 aa7.33□□□□□ -1.24
RAP1B-224ENST00000541216 LINC00310P59036 64 aa7.33□□□□□ -1.24
RAP1B-224ENST00000541216 HNRNPUQ00839 825 aaKnown RBP eCLIP7.33□□□□□ -1.24
RAP1B-224ENST00000541216 ZNF394Q53GI3 561 aa7.33□□□□□ -1.24
RAP1B-224ENST00000541216 FBXL19Q6PCT2 694 aa7.33□□□□□ -1.24
RAP1B-224ENST00000541216 LRFN4Q6PJG9 635 aa7.33□□□□□ -1.24
RAP1B-224ENST00000541216 BNC2Q6ZN30 1099 aaPredicted RBP7.33□□□□□ -1.24
RAP1B-224ENST00000541216 PLPPR2Q96GM1 343 aa7.33□□□□□ -1.24
RAP1B-224ENST00000541216 MIR1-1HGQ9H1L0 117 aa7.33□□□□□ -1.24
RAP1B-224ENST00000541216 DDX41Q9UJV9 622 aaKnown RBP7.33□□□□□ -1.24
RAP1B-224ENST00000541216 DCDC2CA8MYV0 355 aa7.32□□□□□ -1.24
RAP1B-224ENST00000541216 ETV2O00321 342 aaPredicted RBP7.32□□□□□ -1.24
RAP1B-224ENST00000541216 GREM1O60565 184 aa7.32□□□□□ -1.24
RAP1B-224ENST00000541216 RNGTTO60942 597 aaKnown RBP7.32□□□□□ -1.24
RAP1B-224ENST00000541216 CILPO75339 1184 aa7.32□□□□□ -1.24
RAP1B-224ENST00000541216 F13A1P00488 732 aa7.32□□□□□ -1.24
RAP1B-224ENST00000541216 NEFMP07197 916 aa7.32□□□□□ -1.24
RAP1B-224ENST00000541216 GDNFP39905 211 aa7.32□□□□□ -1.24
RAP1B-224ENST00000541216 RACK1P63244 317 aaKnown RBP7.32□□□□□ -1.24
RAP1B-224ENST00000541216 FAM160A1Q05DH4 1040 aa7.32□□□□□ -1.24
RAP1B-224ENST00000541216 C9orf131Q5VYM1 1079 aa7.32□□□□□ -1.24
RAP1B-224ENST00000541216 GTF2IRD1Q9UHL9 959 aa7.32□□□□□ -1.24
RAP1B-224ENST00000541216 PCDHGB7Q9Y5F8 929 aa7.32□□□□□ -1.24
RAP1B-224ENST00000541216 E9PSI1 815 aa7.31□□□□□ -1.24
RAP1B-224ENST00000541216 TCF3P15923 654 aa7.31□□□□□ -1.24
RAP1B-224ENST00000541216 EIF4A3P38919 411 aaKnown RBP7.31□□□□□ -1.24
RAP1B-224ENST00000541216 RAD51AP2Q09MP3 1159 aa7.31□□□□□ -1.24
RAP1B-224ENST00000541216 C12orf40Q86WS4 652 aa7.31□□□□□ -1.24
RAP1B-224ENST00000541216 NT5DC4Q86YG4 428 aa7.31□□□□□ -1.24
RAP1B-224ENST00000541216 GATAD2BQ8WXI9 593 aa7.31□□□□□ -1.24
RAP1B-224ENST00000541216 JARID2Q92833 1246 aaPredicted RBP7.31□□□□□ -1.24
RAP1B-224ENST00000541216 KCNN1Q92952 543 aa7.31□□□□□ -1.24
RAP1B-224ENST00000541216 CCDC120Q96HB5 630 aa7.31□□□□□ -1.24
RAP1B-224ENST00000541216 SLC26A8Q96RN1 970 aa7.31□□□□□ -1.24
RAP1B-224ENST00000541216 IRF2BPLQ9H1B7 796 aa7.31□□□□□ -1.24
RAP1B-224ENST00000541216 CSADQ9Y600 493 aa7.31□□□□□ -1.24
RAP1B-224ENST00000541216 IGF2BP3O00425 579 aaKnown RBP eCLIP7.3□□□□□ -1.24
RAP1B-224ENST00000541216 PSPNO60542 156 aa7.3□□□□□ -1.24
RAP1B-224ENST00000541216 LMNB1P20700 586 aa7.3□□□□□ -1.24
RAP1B-224ENST00000541216 TTLL4Q14679 1199 aa7.3□□□□□ -1.24
RAP1B-224ENST00000541216 NFIXQ14938 502 aa7.3□□□□□ -1.24
RAP1B-224ENST00000541216 PPM1JQ5JR12 505 aa7.3□□□□□ -1.24
RAP1B-224ENST00000541216 WIPI1Q5MNZ9 446 aaPredicted RBP7.3□□□□□ -1.24
RAP1B-224ENST00000541216 FAM196AQ6ZSG2 479 aa7.3□□□□□ -1.24
RAP1B-224ENST00000541216 USP48Q86UV5 1035 aa7.3□□□□□ -1.24
RAP1B-224ENST00000541216 TOP6BLQ8N6T0 577 aa7.3□□□□□ -1.24
RAP1B-224ENST00000541216 GOLM1Q8NBJ4 401 aa7.3□□□□□ -1.24
RAP1B-224ENST00000541216 RNF214Q8ND24 703 aa7.3□□□□□ -1.24
RAP1B-224ENST00000541216 ZNF296Q8WUU4 475 aaPredicted RBP7.3□□□□□ -1.24
RAP1B-224ENST00000541216 SNCAIPQ9Y6H5 919 aa7.3□□□□□ -1.24
RAP1B-224ENST00000541216 A0A0G2JLL6 359 aaPredicted RBP7.29□□□□□ -1.24
RAP1B-224ENST00000541216 BMP7P18075 431 aa7.29□□□□□ -1.24
RAP1B-224ENST00000541216 CRKP46108 304 aa7.29□□□□□ -1.24
RAP1B-224ENST00000541216 CLCN7P51798 805 aa7.29□□□□□ -1.24
RAP1B-224ENST00000541216 RPL6Q02878 288 aaKnown RBP7.29□□□□□ -1.24
RAP1B-224ENST00000541216 ZBTB37Q5TC79 503 aa7.29□□□□□ -1.24
RAP1B-224ENST00000541216 UBE3DQ7Z6J8 389 aa7.29□□□□□ -1.24
RAP1B-224ENST00000541216 SPACA3Q8IXA5 215 aa7.29□□□□□ -1.24
RAP1B-224ENST00000541216 FBXO27Q8NI29 283 aa7.29□□□□□ -1.24
RAP1B-224ENST00000541216 ISL2Q96A47 359 aa7.29□□□□□ -1.24
RAP1B-224ENST00000541216 LRRC3Q9BY71 257 aa7.29□□□□□ -1.24
RAP1B-224ENST00000541216 FANCGO15287 622 aa7.28□□□□□ -1.24
RAP1B-224ENST00000541216 HCLS1P14317 486 aaPredicted RBP7.28□□□□□ -1.24
RAP1B-224ENST00000541216 SNAP47Q5SQN1 464 aa7.28□□□□□ -1.24
RAP1B-224ENST00000541216 HDXQ7Z353 690 aa7.28□□□□□ -1.24
RAP1B-224ENST00000541216 GGNQ86UU5 652 aa7.28□□□□□ -1.24
RAP1B-224ENST00000541216 HEXIM2Q96MH2 286 aaKnown RBP7.28□□□□□ -1.24
RAP1B-224ENST00000541216 TMPRSS5Q9H3S3 457 aa7.28□□□□□ -1.24
RAP1B-224ENST00000541216 SUPT16HQ9Y5B9 1047 aaKnown RBP7.28□□□□□ -1.24
RAP1B-224ENST00000541216 TACC3Q9Y6A5 838 aa7.28□□□□□ -1.24
RAP1B-224ENST00000541216 PITPNM2Q9BZ72 1349 aa7.27□□□□□ -1.24
RAP1B-224ENST00000541216 SRFP11831 508 aa7.27□□□□□ -1.25
RAP1B-224ENST00000541216 PRRT2Q7Z6L0 340 aaPredicted RBP7.27□□□□□ -1.25
RAP1B-224ENST00000541216 ELMO3Q96BJ8 720 aa7.27□□□□□ -1.25
RAP1B-224ENST00000541216 EAF1Q96JC9 268 aaPredicted RBP7.27□□□□□ -1.25
RAP1B-224ENST00000541216 SSU72Q9NP77 194 aaKnown RBP7.27□□□□□ -1.25
RAP1B-224ENST00000541216 REC114Q7Z4M0 266 aa7.26□□□□□ -1.25
RAP1B-224ENST00000541216 KIAA0825Q8IV33 1275 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms