RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 CCDC136Q96JN2 1154 aa11.02□□□□□ -0.65
SNHG1-215ENST00000540904 PARK7Q99497 189 aaKnown RBP11.02□□□□□ -0.65
SNHG1-215ENST00000540904 MKNK2Q9HBH9 465 aa11.02□□□□□ -0.65
SNHG1-215ENST00000540904 TMOD4Q9NZQ9 345 aa11.02□□□□□ -0.65
SNHG1-215ENST00000540904 C19orf81C9J6K1 198 aa11.01□□□□□ -0.65
SNHG1-215ENST00000540904 HIP1O00291 1037 aa11.01□□□□□ -0.65
SNHG1-215ENST00000540904 FOXP2O15409 715 aa11.01□□□□□ -0.65
SNHG1-215ENST00000540904 SP3Q02447 781 aa11.01□□□□□ -0.65
SNHG1-215ENST00000540904 SH3D19Q5HYK7 790 aa11.01□□□□□ -0.65
SNHG1-215ENST00000540904 TMEM179Q6ZVK1 233 aa11.01□□□□□ -0.65
SNHG1-215ENST00000540904 CD99L2Q8TCZ2 262 aa11.01□□□□□ -0.65
SNHG1-215ENST00000540904 ACER1Q8TDN7 264 aa11.01□□□□□ -0.65
SNHG1-215ENST00000540904 SMCR8Q8TEV9 937 aaPredicted RBP11.01□□□□□ -0.65
SNHG1-215ENST00000540904 CCDC17Q96LX7 622 aa11.01□□□□□ -0.65
SNHG1-215ENST00000540904 MCOLN1Q9GZU1 580 aa11.01□□□□□ -0.65
SNHG1-215ENST00000540904 CPA4Q9UI42 421 aa11.01□□□□□ -0.65
SNHG1-215ENST00000540904 SLC45A1Q9Y2W3 748 aa11.01□□□□□ -0.65
SNHG1-215ENST00000540904 LAMB1P07942 1786 aa11□□□□□ -0.65
SNHG1-215ENST00000540904 PRDM1O75626 825 aa11□□□□□ -0.65
SNHG1-215ENST00000540904 ECM2O94769 699 aaPredicted RBP11□□□□□ -0.65
SNHG1-215ENST00000540904 SLC3A2P08195 630 aaKnown RBP11□□□□□ -0.65
SNHG1-215ENST00000540904 HSPD1P10809 573 aaKnown RBP11□□□□□ -0.65
SNHG1-215ENST00000540904 MFAP1P55081 439 aaKnown RBP11□□□□□ -0.65
SNHG1-215ENST00000540904 PPARAQ07869 468 aa11□□□□□ -0.65
SNHG1-215ENST00000540904 PABPC4Q13310 644 aaKnown RBP eCLIP11□□□□□ -0.65
SNHG1-215ENST00000540904 USP17L2Q6R6M4 530 aa11□□□□□ -0.65
SNHG1-215ENST00000540904 CTU1Q7Z7A3 348 aaKnown RBP11□□□□□ -0.65
SNHG1-215ENST00000540904 SKAP1Q86WV1 359 aa11□□□□□ -0.65
SNHG1-215ENST00000540904 CLEC10AQ8IUN9 316 aa11□□□□□ -0.65
SNHG1-215ENST00000540904 ERO1AQ96HE7 468 aa11□□□□□ -0.65
SNHG1-215ENST00000540904 KIAA1683Q9H0B3 1180 aa11□□□□□ -0.65
SNHG1-215ENST00000540904 EMILIN3Q9NT22 766 aa11□□□□□ -0.65
SNHG1-215ENST00000540904 PNMA3Q9UL41 463 aa11□□□□□ -0.65
SNHG1-215ENST00000540904 CCDC171Q6TFL3 1326 aa11□□□□□ -0.65
SNHG1-215ENST00000540904 ROBO3Q96MS0 1386 aa11□□□□□ -0.65
SNHG1-215ENST00000540904 RASA1P20936 1047 aa10.99□□□□□ -0.65
SNHG1-215ENST00000540904 OSBPP22059 807 aa10.99□□□□□ -0.65
SNHG1-215ENST00000540904 IRX3P78415 501 aaPredicted RBP10.99□□□□□ -0.65
SNHG1-215ENST00000540904 ATP2B2Q01814 1243 aa10.99□□□□□ -0.65
SNHG1-215ENST00000540904 ICA1Q05084 483 aa10.99□□□□□ -0.65
SNHG1-215ENST00000540904 C17orf99Q6UX52 265 aa10.99□□□□□ -0.65
SNHG1-215ENST00000540904 ZNF444Q8N0Y2 327 aaPredicted RBP10.99□□□□□ -0.65
SNHG1-215ENST00000540904 ASCC2Q9H1I8 757 aaPredicted RBP10.99□□□□□ -0.65
SNHG1-215ENST00000540904 ZNF287Q9HBT7 754 aa10.99□□□□□ -0.65
SNHG1-215ENST00000540904 TRIM17Q9Y577 477 aa10.99□□□□□ -0.65
SNHG1-215ENST00000540904 ADGRA2Q96PE1 1338 aa10.99□□□□□ -0.65
SNHG1-215ENST00000540904 BAZ2AQ9UIF9 1905 aaKnown RBP10.99□□□□□ -0.65
SNHG1-215ENST00000540904 CASP8AP2Q9UKL3 1982 aa10.99□□□□□ -0.65
SNHG1-215ENST00000540904 PHIPQ8WWQ0 1821 aa10.98□□□□□ -0.65
SNHG1-215ENST00000540904 A0A1W2PRG0 241 aa10.98□□□□□ -0.65
SNHG1-215ENST00000540904 FGAP02671 866 aa10.98□□□□□ -0.65
SNHG1-215ENST00000540904 USP14P54578 494 aa10.98□□□□□ -0.65
SNHG1-215ENST00000540904 LACTBP83111 547 aaPredicted RBP10.98□□□□□ -0.65
SNHG1-215ENST00000540904 CAP1Q01518 475 aa10.98□□□□□ -0.65
SNHG1-215ENST00000540904 CTDSPL2Q05D32 466 aa10.98□□□□□ -0.65
SNHG1-215ENST00000540904 PDE4BQ07343 736 aa10.98□□□□□ -0.65
SNHG1-215ENST00000540904 KIF22Q14807 665 aa10.98□□□□□ -0.65
SNHG1-215ENST00000540904 ALX1Q15699 326 aa10.98□□□□□ -0.65
SNHG1-215ENST00000540904 OTOP1Q7RTM1 612 aa10.98□□□□□ -0.65
SNHG1-215ENST00000540904 C12orf42Q96LP6 360 aa10.98□□□□□ -0.65
SNHG1-215ENST00000540904 KANSL2Q9H9L4 492 aa10.98□□□□□ -0.65
SNHG1-215ENST00000540904 ARHGEF10LQ9HCE6 1279 aa10.98□□□□□ -0.65
SNHG1-215ENST00000540904 ATAD5Q96QE3 1844 aa10.98□□□□□ -0.65
SNHG1-215ENST00000540904 PITPNM1O00562 1244 aa10.97□□□□□ -0.65
SNHG1-215ENST00000540904 EEF2P13639 858 aaKnown RBP10.97□□□□□ -0.65
SNHG1-215ENST00000540904 VCAM1P19320 739 aa10.97□□□□□ -0.65
SNHG1-215ENST00000540904 HOXA7P31268 230 aaPredicted RBP10.97□□□□□ -0.65
SNHG1-215ENST00000540904 PKN2Q16513 984 aaKnown RBP10.97□□□□□ -0.65
SNHG1-215ENST00000540904 FAM47AQ5JRC9 791 aa10.97□□□□□ -0.65
SNHG1-215ENST00000540904 SIAH1Q8IUQ4 282 aa10.97□□□□□ -0.65
SNHG1-215ENST00000540904 ANKRD13CQ8N6S4 541 aa10.97□□□□□ -0.65
SNHG1-215ENST00000540904 ABHD8Q96I13 439 aa10.97□□□□□ -0.65
SNHG1-215ENST00000540904 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.97□□□□□ -0.65
SNHG1-215ENST00000540904 ARHGAP39Q9C0H5 1083 aa10.97□□□□□ -0.65
SNHG1-215ENST00000540904 EFCC1Q9HA90 598 aa10.97□□□□□ -0.65
SNHG1-215ENST00000540904 INCENPQ9NQS7 918 aa10.97□□□□□ -0.65
SNHG1-215ENST00000540904 RAD21O60216 631 aa10.96□□□□□ -0.65
SNHG1-215ENST00000540904 FMNL1O95466 1100 aaPredicted RBP10.96□□□□□ -0.65
SNHG1-215ENST00000540904 TSPY3P0CV98 308 aa10.96□□□□□ -0.65
SNHG1-215ENST00000540904 TSPY8P0CW00 308 aa10.96□□□□□ -0.65
SNHG1-215ENST00000540904 BCRP11274 1271 aa10.96□□□□□ -0.65
SNHG1-215ENST00000540904 CHMLP26374 656 aa10.96□□□□□ -0.65
SNHG1-215ENST00000540904 GCLCP48506 637 aaPredicted RBP10.96□□□□□ -0.65
SNHG1-215ENST00000540904 HAND2P61296 217 aa10.96□□□□□ -0.65
SNHG1-215ENST00000540904 TFAP4Q01664 338 aa10.96□□□□□ -0.65
SNHG1-215ENST00000540904 ARHGEF6Q15052 776 aa10.96□□□□□ -0.65
SNHG1-215ENST00000540904 KIAA1755Q5JYT7 1200 aa10.96□□□□□ -0.65
SNHG1-215ENST00000540904 SPICE1Q8N0Z3 855 aa10.96□□□□□ -0.65
SNHG1-215ENST00000540904 RUFY2Q8WXA3 655 aa10.96□□□□□ -0.65
SNHG1-215ENST00000540904 P2RX7Q99572 595 aaKnown RBP10.96□□□□□ -0.65
SNHG1-215ENST00000540904 IL25Q9H293 177 aa10.96□□□□□ -0.65
SNHG1-215ENST00000540904 RPAP3Q9H6T3 665 aaPredicted RBP10.96□□□□□ -0.65
SNHG1-215ENST00000540904 SH2D4AQ9H788 454 aa10.96□□□□□ -0.65
SNHG1-215ENST00000540904 TOMM22Q9NS69 142 aa10.96□□□□□ -0.65
SNHG1-215ENST00000540904 ANAPC4Q9UJX5 808 aa10.96□□□□□ -0.65
SNHG1-215ENST00000540904 TMX2Q9Y320 296 aa10.96□□□□□ -0.65
SNHG1-215ENST00000540904 ZMYM6O95789 1325 aa10.95□□□□□ -0.66
SNHG1-215ENST00000540904 USP17L15C9J2P7 530 aa10.95□□□□□ -0.66
SNHG1-215ENST00000540904 USP17L13C9JLJ4 530 aa10.95□□□□□ -0.66
SNHG1-215ENST00000540904 USP17L11C9JVI0 530 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms