RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 ATRIPQ8WXE1 791 aa10.96□□□□□ -0.65
CLDN2-202ENST00000540876 SIL1Q9H173 461 aa10.96□□□□□ -0.65
CLDN2-202ENST00000540876 POLD4Q9HCU8 107 aa10.96□□□□□ -0.65
CLDN2-202ENST00000540876 BATF3Q9NR55 127 aa10.96□□□□□ -0.65
CLDN2-202ENST00000540876 HOMER3Q9NSC5 361 aa10.96□□□□□ -0.65
CLDN2-202ENST00000540876 AGPSO00116 658 aa10.96□□□□□ -0.66
CLDN2-202ENST00000540876 LAMB3Q13751 1172 aa10.96□□□□□ -0.66
CLDN2-202ENST00000540876 HHATQ5VTY9 493 aa10.96□□□□□ -0.66
CLDN2-202ENST00000540876 TTLL7Q6ZT98 887 aa10.96□□□□□ -0.66
CLDN2-202ENST00000540876 SMARCC2Q8TAQ2 1214 aa10.96□□□□□ -0.66
CLDN2-202ENST00000540876 BPIFA3Q9BQP9 254 aa10.96□□□□□ -0.66
CLDN2-202ENST00000540876 HAUS2Q9NVX0 235 aa10.96□□□□□ -0.66
CLDN2-202ENST00000540876 STAP2Q9UGK3 403 aa10.96□□□□□ -0.66
CLDN2-202ENST00000540876 ZC3H4Q9UPT8 1303 aaKnown RBP10.96□□□□□ -0.66
CLDN2-202ENST00000540876 ZKSCAN1P17029 563 aaPredicted RBP10.95□□□□□ -0.66
CLDN2-202ENST00000540876 CCT4P50991 539 aaKnown RBP10.95□□□□□ -0.66
CLDN2-202ENST00000540876 ATP1A2P50993 1020 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 NCAPH2Q6IBW4 605 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 WDR93Q6P2C0 686 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 FUKQ8N0W3 1084 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 NSMCE1Q8WV22 266 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 GOPCQ9HD26 462 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 RTEL1Q9NZ71 1219 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 PES1O00541 588 aaKnown RBP10.95□□□□□ -0.66
CLDN2-202ENST00000540876 RTN3O95197 1032 aaPredicted RBP10.95□□□□□ -0.66
CLDN2-202ENST00000540876 PYGBP11216 843 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 MYO1EQ12965 1108 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 COL9A3Q14050 684 aaPredicted RBP10.95□□□□□ -0.66
CLDN2-202ENST00000540876 FILIP1LQ4L180 1135 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 HDGFL1Q5TGJ6 251 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 EZH1Q92800 747 aaPredicted RBP10.95□□□□□ -0.66
CLDN2-202ENST00000540876 TMOD3Q9NYL9 352 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 RCOR1Q9UKL0 485 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 NWD2Q9ULI1 1742 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 MYO1BO43795 1136 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 BUB1BO60566 1050 aaPredicted RBP10.95□□□□□ -0.66
CLDN2-202ENST00000540876 ANXA1P04083 346 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 SLC3A2P08195 630 aaKnown RBP10.95□□□□□ -0.66
CLDN2-202ENST00000540876 ABCD1P33897 745 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 PLCB4Q15147 1175 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 NKX1-1Q15270 411 aaPredicted RBP10.95□□□□□ -0.66
CLDN2-202ENST00000540876 SLC30A9Q6PML9 568 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 SLC35F6Q8N357 371 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 B4GALNT2Q8NHY0 566 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 ZNF496Q96IT1 587 aaPredicted RBP10.95□□□□□ -0.66
CLDN2-202ENST00000540876 USP28Q96RU2 1077 aa10.95□□□□□ -0.66
CLDN2-202ENST00000540876 CDCA7Q9BWT1 371 aaPredicted RBP10.95□□□□□ -0.66
CLDN2-202ENST00000540876 PNMA6EA0A0J9YXQ4 647 aa10.94□□□□□ -0.66
CLDN2-202ENST00000540876 SETSIPP0DME0 302 aa10.94□□□□□ -0.66
CLDN2-202ENST00000540876 NLRP12P59046 1061 aa10.94□□□□□ -0.66
CLDN2-202ENST00000540876 NAA35Q5VZE5 725 aa10.94□□□□□ -0.66
CLDN2-202ENST00000540876 ZNF790Q6PG37 636 aa10.94□□□□□ -0.66
CLDN2-202ENST00000540876 BZW1Q7L1Q6 419 aaKnown RBP10.94□□□□□ -0.66
CLDN2-202ENST00000540876 HINFPQ9BQA5 517 aa10.94□□□□□ -0.66
CLDN2-202ENST00000540876 ZNF232Q9UNY5 417 aa10.94□□□□□ -0.66
CLDN2-202ENST00000540876 SOWAHDA6NJG2 315 aa10.94□□□□□ -0.66
CLDN2-202ENST00000540876 ONECUT3O60422 494 aaPredicted RBP10.94□□□□□ -0.66
CLDN2-202ENST00000540876 ATP2C2O75185 946 aa10.94□□□□□ -0.66
CLDN2-202ENST00000540876 WHAMMP3Q1A5X7 153 aa10.94□□□□□ -0.66
CLDN2-202ENST00000540876 CCDC121Q6ZUS5 278 aa10.94□□□□□ -0.66
CLDN2-202ENST00000540876 HOOK2Q96ED9 719 aa10.94□□□□□ -0.66
CLDN2-202ENST00000540876 SPAG5Q96R06 1193 aa10.94□□□□□ -0.66
CLDN2-202ENST00000540876 CDC5LQ99459 802 aaKnown RBP10.94□□□□□ -0.66
CLDN2-202ENST00000540876 SELENOOQ9BVL4 669 aa10.94□□□□□ -0.66
CLDN2-202ENST00000540876 TM6SF1Q9BZW5 370 aa10.94□□□□□ -0.66
CLDN2-202ENST00000540876 TRPC6Q9Y210 931 aa10.94□□□□□ -0.66
CLDN2-202ENST00000540876 TNS2Q63HR2 1409 aa10.94□□□□□ -0.66
CLDN2-202ENST00000540876 OPLAHO14841 1288 aa10.93□□□□□ -0.66
CLDN2-202ENST00000540876 A1BGP04217 495 aa10.93□□□□□ -0.66
CLDN2-202ENST00000540876 TUBB2AQ13885 445 aa10.93□□□□□ -0.66
CLDN2-202ENST00000540876 MIS18BP1Q6P0N0 1132 aa10.93□□□□□ -0.66
CLDN2-202ENST00000540876 DNAJC14Q6Y2X3 702 aaPredicted RBP10.93□□□□□ -0.66
CLDN2-202ENST00000540876 YTHDF3Q7Z739 585 aaKnown RBP10.93□□□□□ -0.66
CLDN2-202ENST00000540876 TC2NQ8N9U0 490 aa10.93□□□□□ -0.66
CLDN2-202ENST00000540876 RASSF8Q8NHQ8 419 aa10.93□□□□□ -0.66
CLDN2-202ENST00000540876 MAGEC3Q8TD91 643 aa10.93□□□□□ -0.66
CLDN2-202ENST00000540876 MRPS27Q92552 414 aaKnown RBP10.93□□□□□ -0.66
CLDN2-202ENST00000540876 TUBB2BQ9BVA1 445 aa10.93□□□□□ -0.66
CLDN2-202ENST00000540876 TSGA10Q9BZW7 698 aa10.93□□□□□ -0.66
CLDN2-202ENST00000540876 ZCWPW1Q9H0M4 648 aa10.93□□□□□ -0.66
CLDN2-202ENST00000540876 PHAXQ9H814 394 aaKnown RBP10.93□□□□□ -0.66
CLDN2-202ENST00000540876 NDUFA8P51970 172 aa10.93□□□□□ -0.66
CLDN2-202ENST00000540876 EIF4A1P60842 406 aaKnown RBP10.93□□□□□ -0.66
CLDN2-202ENST00000540876 ARMCX6Q7L4S7 300 aa10.93□□□□□ -0.66
CLDN2-202ENST00000540876 KRT27Q7Z3Y8 459 aa10.93□□□□□ -0.66
CLDN2-202ENST00000540876 FMR1NBQ8N0W7 255 aaPredicted RBP10.93□□□□□ -0.66
CLDN2-202ENST00000540876 CNTROBQ8N137 903 aa10.93□□□□□ -0.66
CLDN2-202ENST00000540876 TCP11Q8WWU5 503 aa10.93□□□□□ -0.66
CLDN2-202ENST00000540876 STAMBPL1Q96FJ0 436 aa10.93□□□□□ -0.66
CLDN2-202ENST00000540876 SH3GL2Q99962 352 aa10.93□□□□□ -0.66
CLDN2-202ENST00000540876 KDM4CQ9H3R0 1056 aa10.93□□□□□ -0.66
CLDN2-202ENST00000540876 TMEM165Q9HC07 324 aa10.93□□□□□ -0.66
CLDN2-202ENST00000540876 BAIAP2L1Q9UHR4 511 aa10.93□□□□□ -0.66
CLDN2-202ENST00000540876 CDKL5O76039 1030 aa10.92□□□□□ -0.66
CLDN2-202ENST00000540876 UBTFL1P0CB47 393 aaPredicted RBP10.92□□□□□ -0.66
CLDN2-202ENST00000540876 NEFHP12036 1026 aa10.92□□□□□ -0.66
CLDN2-202ENST00000540876 MCM3P25205 808 aa10.92□□□□□ -0.66
CLDN2-202ENST00000540876 GNPTABQ3T906 1256 aa10.92□□□□□ -0.66
CLDN2-202ENST00000540876 ZNF473Q8WTR7 871 aaKnown RBP10.92□□□□□ -0.66
CLDN2-202ENST00000540876 NAPGQ99747 312 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms