RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 ATP2B2Q01814 1243 aa18.33■□□□□ 0.52
DDB1-218ENST00000540784 RNF20Q5VTR2 975 aa18.33■□□□□ 0.52
DDB1-218ENST00000540784 ACER1Q8TDN7 264 aa18.33■□□□□ 0.52
DDB1-218ENST00000540784 BRI3BPQ8WY22 251 aa18.33■□□□□ 0.52
DDB1-218ENST00000540784 ESR2Q92731 530 aa18.33■□□□□ 0.52
DDB1-218ENST00000540784 BEGAINQ9BUH8 593 aa18.33■□□□□ 0.52
DDB1-218ENST00000540784 KRT23Q9C075 422 aa18.33■□□□□ 0.52
DDB1-218ENST00000540784 CNNM2Q9H8M5 875 aa18.33■□□□□ 0.52
DDB1-218ENST00000540784 ARHGEF10LQ9HCE6 1279 aa18.33■□□□□ 0.52
DDB1-218ENST00000540784 OTOFQ9HC10 1997 aa18.33■□□□□ 0.52
DDB1-218ENST00000540784 A0A0G2JLL6 359 aaPredicted RBP18.32■□□□□ 0.52
DDB1-218ENST00000540784 EEF2P13639 858 aaKnown RBP18.32■□□□□ 0.52
DDB1-218ENST00000540784 ICA1Q05084 483 aa18.32■□□□□ 0.52
DDB1-218ENST00000540784 TRDNQ13061 729 aa18.32■□□□□ 0.52
DDB1-218ENST00000540784 MTMR2Q13614 643 aa18.32■□□□□ 0.52
DDB1-218ENST00000540784 CREB3L3Q68CJ9 461 aa18.32■□□□□ 0.52
DDB1-218ENST00000540784 USP17L2Q6R6M4 530 aa18.32■□□□□ 0.52
DDB1-218ENST00000540784 GADL1Q6ZQY3 521 aa18.32■□□□□ 0.52
DDB1-218ENST00000540784 PRRT2Q7Z6L0 340 aaPredicted RBP18.32■□□□□ 0.52
DDB1-218ENST00000540784 IFNL1Q8IU54 200 aa18.32■□□□□ 0.52
DDB1-218ENST00000540784 SIAH1Q8IUQ4 282 aa18.32■□□□□ 0.52
DDB1-218ENST00000540784 FEZ1Q99689 392 aa18.32■□□□□ 0.52
DDB1-218ENST00000540784 PTPN18Q99952 460 aa18.32■□□□□ 0.52
DDB1-218ENST00000540784 TMOD4Q9NZQ9 345 aa18.32■□□□□ 0.52
DDB1-218ENST00000540784 E7EWF7 191 aa18.31■□□□□ 0.52
DDB1-218ENST00000540784 SLC27A2O14975 620 aa18.31■□□□□ 0.52
DDB1-218ENST00000540784 USP14P54578 494 aa18.31■□□□□ 0.52
DDB1-218ENST00000540784 HMGCS2P54868 508 aa18.31■□□□□ 0.52
DDB1-218ENST00000540784 SH3D19Q5HYK7 790 aa18.31■□□□□ 0.52
DDB1-218ENST00000540784 PPP4R3BQ5MIZ7 849 aa18.31■□□□□ 0.52
DDB1-218ENST00000540784 KIAA1683Q9H0B3 1180 aa18.31■□□□□ 0.52
DDB1-218ENST00000540784 SH2D4AQ9H788 454 aa18.31■□□□□ 0.52
DDB1-218ENST00000540784 MTMR4Q9NYA4 1195 aa18.31■□□□□ 0.52
DDB1-218ENST00000540784 NYAP2Q9P242 653 aa18.31■□□□□ 0.52
DDB1-218ENST00000540784 CLIP2Q9UDT6 1046 aa18.31■□□□□ 0.52
DDB1-218ENST00000540784 IGKV6D-41A0A0C4DH26 115 aa18.3■□□□□ 0.52
DDB1-218ENST00000540784 A0A1W2PRG0 241 aa18.3■□□□□ 0.52
DDB1-218ENST00000540784 B4E1Z4 1266 aa18.3■□□□□ 0.52
DDB1-218ENST00000540784 ALDH1A1P00352 501 aa18.3■□□□□ 0.52
DDB1-218ENST00000540784 CLEC10AQ8IUN9 316 aa18.3■□□□□ 0.52
DDB1-218ENST00000540784 CEP95Q96GE4 821 aa18.3■□□□□ 0.52
DDB1-218ENST00000540784 WBP1LQ9NX94 342 aa18.3■□□□□ 0.52
DDB1-218ENST00000540784 ZSWIM5Q9P217 1185 aa18.3■□□□□ 0.52
DDB1-218ENST00000540784 TMX2Q9Y320 296 aa18.3■□□□□ 0.52
DDB1-218ENST00000540784 DOCK1Q14185 1865 aa18.3■□□□□ 0.52
DDB1-218ENST00000540784 NEDD4P46934 1319 aa18.29■□□□□ 0.52
DDB1-218ENST00000540784 BTBD19C9JJ37 291 aa18.29■□□□□ 0.52
DDB1-218ENST00000540784 IGF2BP3O00425 579 aaKnown RBP eCLIP18.29■□□□□ 0.52
DDB1-218ENST00000540784 EPB41L2O43491 1005 aaKnown RBP18.29■□□□□ 0.52
DDB1-218ENST00000540784 KDM4AO75164 1064 aa18.29■□□□□ 0.52
DDB1-218ENST00000540784 TTLL1O95922 423 aa18.29■□□□□ 0.52
DDB1-218ENST00000540784 MOGSQ13724 837 aa18.29■□□□□ 0.52
DDB1-218ENST00000540784 ZYXQ15942 572 aaKnown RBP18.29■□□□□ 0.52
DDB1-218ENST00000540784 ANKRD23Q86SG2 305 aa18.29■□□□□ 0.52
DDB1-218ENST00000540784 PROCA1Q8NCQ7 364 aaPredicted RBP18.29■□□□□ 0.52
DDB1-218ENST00000540784 NCOA7Q8NI08 942 aa18.29■□□□□ 0.52
DDB1-218ENST00000540784 MKL1Q969V6 931 aa18.29■□□□□ 0.52
DDB1-218ENST00000540784 USP26Q9BXU7 913 aa18.29■□□□□ 0.52
DDB1-218ENST00000540784 IL17RBQ9NRM6 502 aa18.29■□□□□ 0.52
DDB1-218ENST00000540784 EMILIN3Q9NT22 766 aa18.29■□□□□ 0.52
DDB1-218ENST00000540784 TCP11L1Q9NUJ3 509 aa18.29■□□□□ 0.52
DDB1-218ENST00000540784 RNF186Q9NXI6 227 aa18.29■□□□□ 0.52
DDB1-218ENST00000540784 LAMB1P07942 1786 aa18.28■□□□□ 0.52
DDB1-218ENST00000540784 NMT2O60551 498 aa18.28■□□□□ 0.52
DDB1-218ENST00000540784 TRPA1O75762 1119 aa18.28■□□□□ 0.52
DDB1-218ENST00000540784 ZKSCAN1P17029 563 aaPredicted RBP18.28■□□□□ 0.52
DDB1-218ENST00000540784 CCDC178Q5BJE1 867 aa18.28■□□□□ 0.52
DDB1-218ENST00000540784 GPAT2Q6NUI2 795 aa18.28■□□□□ 0.52
DDB1-218ENST00000540784 RALYLQ86SE5 291 aaKnown RBP18.28■□□□□ 0.52
DDB1-218ENST00000540784 IQCA1Q86XH1 822 aa18.28■□□□□ 0.52
DDB1-218ENST00000540784 FAM43AQ8N2R8 423 aa18.28■□□□□ 0.52
DDB1-218ENST00000540784 TAF6LQ9Y6J9 622 aa18.28■□□□□ 0.52
DDB1-218ENST00000540784 PDHXO00330 501 aa18.27■□□□□ 0.52
DDB1-218ENST00000540784 PABPC4Q13310 644 aaKnown RBP eCLIP18.27■□□□□ 0.52
DDB1-218ENST00000540784 DGKZQ13574 1117 aa18.27■□□□□ 0.52
DDB1-218ENST00000540784 NKX2-3Q8TAU0 364 aa18.27■□□□□ 0.52
DDB1-218ENST00000540784 TTC14Q96N46 770 aa18.27■□□□□ 0.52
DDB1-218ENST00000540784 ZCCHC17Q9NP64 241 aaKnown RBP18.27■□□□□ 0.52
DDB1-218ENST00000540784 STX8Q9UNK0 236 aa18.27■□□□□ 0.52
DDB1-218ENST00000540784 AGTPBP1Q9UPW5 1226 aa18.27■□□□□ 0.52
DDB1-218ENST00000540784 PLIN4Q96Q06 1357 aa18.27■□□□□ 0.51
DDB1-218ENST00000540784 CEP350Q5VT06 3117 aa18.27■□□□□ 0.51
DDB1-218ENST00000540784 CA12O43570 354 aa18.26■□□□□ 0.51
DDB1-218ENST00000540784 RAD21O60216 631 aa18.26■□□□□ 0.51
DDB1-218ENST00000540784 HSPA4P34932 840 aa18.26■□□□□ 0.51
DDB1-218ENST00000540784 TSGA10IPQ3SY00 556 aa18.26■□□□□ 0.51
DDB1-218ENST00000540784 STOX1Q6ZVD7 989 aa18.26■□□□□ 0.51
DDB1-218ENST00000540784 C12orf42Q96LP6 360 aa18.26■□□□□ 0.51
DDB1-218ENST00000540784 ZKSCAN3Q9BRR0 538 aa18.26■□□□□ 0.51
DDB1-218ENST00000540784 VCPKMTQ9H867 229 aa18.26■□□□□ 0.51
DDB1-218ENST00000540784 GOPCQ9HD26 462 aa18.26■□□□□ 0.51
DDB1-218ENST00000540784 SLC45A1Q9Y2W3 748 aa18.26■□□□□ 0.51
DDB1-218ENST00000540784 ATAD5Q96QE3 1844 aa18.26■□□□□ 0.51
DDB1-218ENST00000540784 F5H6K3 240 aa18.25■□□□□ 0.51
DDB1-218ENST00000540784 OSBPP22059 807 aa18.25■□□□□ 0.51
DDB1-218ENST00000540784 MCCP23508 829 aa18.25■□□□□ 0.51
DDB1-218ENST00000540784 KLRC3Q07444 240 aa18.25■□□□□ 0.51
DDB1-218ENST00000540784 KRT32Q14532 448 aa18.25■□□□□ 0.51
DDB1-218ENST00000540784 TREML2Q5T2D2 321 aa18.25■□□□□ 0.51
DDB1-218ENST00000540784 DGKHQ86XP1 1220 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms