RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 PRDM12Q9H4Q4 367 aa10.98□□□□□ -0.65
TRAPPC1-202ENST00000540486 USP40Q9NVE5 1235 aa10.98□□□□□ -0.65
TRAPPC1-202ENST00000540486 KIF16BQ96L93 1317 aa10.98□□□□□ -0.65
TRAPPC1-202ENST00000540486 SPP2Q13103 211 aa10.97□□□□□ -0.65
TRAPPC1-202ENST00000540486 TRIM60Q495X7 471 aa10.97□□□□□ -0.65
TRAPPC1-202ENST00000540486 SH3D19Q5HYK7 790 aa10.97□□□□□ -0.65
TRAPPC1-202ENST00000540486 SH3RF1Q7Z6J0 888 aa10.97□□□□□ -0.65
TRAPPC1-202ENST00000540486 ZFPM1Q8IX07 1006 aa10.97□□□□□ -0.65
TRAPPC1-202ENST00000540486 ANKRD44Q8N8A2 993 aa10.97□□□□□ -0.65
TRAPPC1-202ENST00000540486 WDR66Q8TBY9 1149 aa10.97□□□□□ -0.65
TRAPPC1-202ENST00000540486 EDC3Q96F86 508 aaKnown RBP10.97□□□□□ -0.65
TRAPPC1-202ENST00000540486 IDI2Q9BXS1 227 aa10.97□□□□□ -0.65
TRAPPC1-202ENST00000540486 DAGLAQ9Y4D2 1042 aa10.97□□□□□ -0.65
TRAPPC1-202ENST00000540486 MROH5Q6ZUA9 1318 aa10.97□□□□□ -0.65
TRAPPC1-202ENST00000540486 C2orf72A6NCS6 295 aa10.96□□□□□ -0.65
TRAPPC1-202ENST00000540486 KBTBD13C9JR72 458 aa10.96□□□□□ -0.65
TRAPPC1-202ENST00000540486 RLBP1P12271 317 aa10.96□□□□□ -0.65
TRAPPC1-202ENST00000540486 IGFBP4P22692 258 aa10.96□□□□□ -0.65
TRAPPC1-202ENST00000540486 PDE4AP27815 886 aa10.96□□□□□ -0.65
TRAPPC1-202ENST00000540486 CNGA1P29973 690 aa10.96□□□□□ -0.65
TRAPPC1-202ENST00000540486 HOXA7P31268 230 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC1-202ENST00000540486 EPHB4P54760 987 aa10.96□□□□□ -0.65
TRAPPC1-202ENST00000540486 HMGCS2P54868 508 aa10.96□□□□□ -0.65
TRAPPC1-202ENST00000540486 IRX3P78415 501 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC1-202ENST00000540486 ADGRE1Q14246 886 aa10.96□□□□□ -0.65
TRAPPC1-202ENST00000540486 RABL6Q3YEC7 729 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC1-202ENST00000540486 GPR142Q7Z601 462 aa10.96□□□□□ -0.65
TRAPPC1-202ENST00000540486 PLEKHH3Q7Z736 793 aa10.96□□□□□ -0.65
TRAPPC1-202ENST00000540486 ZSCAN29Q8IWY8 852 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC1-202ENST00000540486 TMEM57Q8N5G2 664 aa10.96□□□□□ -0.65
TRAPPC1-202ENST00000540486 TMC2Q8TDI7 906 aa10.96□□□□□ -0.65
TRAPPC1-202ENST00000540486 BICC1Q9H694 974 aaKnown RBP10.96□□□□□ -0.65
TRAPPC1-202ENST00000540486 RCAN3Q9UKA8 241 aa10.96□□□□□ -0.65
TRAPPC1-202ENST00000540486 CACNA1AO00555 2505 aa10.96□□□□□ -0.66
TRAPPC1-202ENST00000540486 AK9Q5TCS8 1911 aa10.96□□□□□ -0.66
TRAPPC1-202ENST00000540486 PLXNB2O15031 1838 aa10.95□□□□□ -0.66
TRAPPC1-202ENST00000540486 SMIM22K7EJ46 135 aa10.95□□□□□ -0.66
TRAPPC1-202ENST00000540486 TBC1D12O60347 775 aa10.95□□□□□ -0.66
TRAPPC1-202ENST00000540486 GLRX3O76003 335 aaKnown RBP10.95□□□□□ -0.66
TRAPPC1-202ENST00000540486 RAG1P15918 1043 aa10.95□□□□□ -0.66
TRAPPC1-202ENST00000540486 FPGSQ05932 587 aa10.95□□□□□ -0.66
TRAPPC1-202ENST00000540486 MAP2K5Q13163 448 aa10.95□□□□□ -0.66
TRAPPC1-202ENST00000540486 GJC2Q5T442 439 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC1-202ENST00000540486 GTF3C2Q8WUA4 911 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC1-202ENST00000540486 MEIS3Q99687 375 aa10.95□□□□□ -0.66
TRAPPC1-202ENST00000540486 OSBPL5Q9H0X9 879 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC1-202ENST00000540486 C11orf16Q9NQ32 467 aa10.95□□□□□ -0.66
TRAPPC1-202ENST00000540486 A0A1B0GUL6 1792 aa10.95□□□□□ -0.66
TRAPPC1-202ENST00000540486 PTPRFP10586 1907 aa10.94□□□□□ -0.66
TRAPPC1-202ENST00000540486 KIAA0355O15063 1070 aa10.94□□□□□ -0.66
TRAPPC1-202ENST00000540486 CLTBP09497 229 aa10.94□□□□□ -0.66
TRAPPC1-202ENST00000540486 ITGB8P26012 769 aa10.94□□□□□ -0.66
TRAPPC1-202ENST00000540486 RGS3P49796 1198 aa10.94□□□□□ -0.66
TRAPPC1-202ENST00000540486 HERVK_113P62684 666 aa10.94□□□□□ -0.66
TRAPPC1-202ENST00000540486 ERVK-9P63128 1117 aa10.94□□□□□ -0.66
TRAPPC1-202ENST00000540486 ERVK-24P63145 666 aa10.94□□□□□ -0.66
TRAPPC1-202ENST00000540486 TLE2Q04725 743 aa10.94□□□□□ -0.66
TRAPPC1-202ENST00000540486 CCDC129Q6ZRS4 1044 aa10.94□□□□□ -0.66
TRAPPC1-202ENST00000540486 SH3BP5LQ7L8J4 393 aa10.94□□□□□ -0.66
TRAPPC1-202ENST00000540486 CCDC84Q86UT8 332 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC1-202ENST00000540486 PBX4Q9BYU1 374 aa10.94□□□□□ -0.66
TRAPPC1-202ENST00000540486 TXNRD2Q9NNW7 524 aa10.94□□□□□ -0.66
TRAPPC1-202ENST00000540486 RBPJLQ9UBG7 517 aa10.94□□□□□ -0.66
TRAPPC1-202ENST00000540486 MYO9BQ13459 2157 aa10.94□□□□□ -0.66
TRAPPC1-202ENST00000540486 XIRP2A4UGR9 3374 aa10.93□□□□□ -0.66
TRAPPC1-202ENST00000540486 PI4K2BG5E9Z4 385 aa10.93□□□□□ -0.66
TRAPPC1-202ENST00000540486 ERC2O15083 957 aa10.93□□□□□ -0.66
TRAPPC1-202ENST00000540486 HOXC6P09630 235 aa10.93□□□□□ -0.66
TRAPPC1-202ENST00000540486 UBTFL1P0CB47 393 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC1-202ENST00000540486 RFX5P48382 616 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC1-202ENST00000540486 FOXK1P85037 733 aa10.93□□□□□ -0.66
TRAPPC1-202ENST00000540486 ATP2B2Q01814 1243 aa10.93□□□□□ -0.66
TRAPPC1-202ENST00000540486 TFF2Q03403 129 aa10.93□□□□□ -0.66
TRAPPC1-202ENST00000540486 MFSD10Q14728 455 aa10.93□□□□□ -0.66
TRAPPC1-202ENST00000540486 DIXDC1Q155Q3 683 aa10.93□□□□□ -0.66
TRAPPC1-202ENST00000540486 Q3C1V9 767 aa10.93□□□□□ -0.66
TRAPPC1-202ENST00000540486 CCDC174Q6PII3 467 aa10.93□□□□□ -0.66
TRAPPC1-202ENST00000540486 HERVK_113Q902F9 699 aa10.93□□□□□ -0.66
TRAPPC1-202ENST00000540486 PUS3Q9BZE2 481 aaKnown RBP10.93□□□□□ -0.66
TRAPPC1-202ENST00000540486 PORCNQ9H237 461 aa10.93□□□□□ -0.66
TRAPPC1-202ENST00000540486 KCNH6Q9H252 994 aa10.93□□□□□ -0.66
TRAPPC1-202ENST00000540486 AS3MTQ9HBK9 375 aa10.93□□□□□ -0.66
TRAPPC1-202ENST00000540486 CWC22Q9HCG8 908 aaKnown RBP10.93□□□□□ -0.66
TRAPPC1-202ENST00000540486 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC1-202ENST00000540486 DDTLA6NHG4 134 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC1-202ENST00000540486 USP17L5A8MUK1 530 aa10.92□□□□□ -0.66
TRAPPC1-202ENST00000540486 PRR33A8MZF0 331 aa10.92□□□□□ -0.66
TRAPPC1-202ENST00000540486 ADCYAP1R1P41586 468 aa10.92□□□□□ -0.66
TRAPPC1-202ENST00000540486 KCNQ1P51787 676 aa10.92□□□□□ -0.66
TRAPPC1-202ENST00000540486 RAB30Q15771 203 aa10.92□□□□□ -0.66
TRAPPC1-202ENST00000540486 KLHDC4Q8TBB5 520 aa10.92□□□□□ -0.66
TRAPPC1-202ENST00000540486 PANK1Q8TE04 598 aa10.92□□□□□ -0.66
TRAPPC1-202ENST00000540486 TMOD4Q9NZQ9 345 aa10.92□□□□□ -0.66
TRAPPC1-202ENST00000540486 FLRT1Q9NZU1 646 aa10.92□□□□□ -0.66
TRAPPC1-202ENST00000540486 MSRAQ9UJ68 235 aa10.92□□□□□ -0.66
TRAPPC1-202ENST00000540486 TCF20Q9UGU0 1960 aaKnown RBP10.92□□□□□ -0.66
TRAPPC1-202ENST00000540486 PHIPQ8WWQ0 1821 aa10.91□□□□□ -0.66
TRAPPC1-202ENST00000540486 SLC15A5A6NIM6 579 aa10.91□□□□□ -0.66
TRAPPC1-202ENST00000540486 PDE8BO95263 885 aa10.91□□□□□ -0.66
TRAPPC1-202ENST00000540486 LDHBP07195 334 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms