RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 ECE2O60344 883 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 WDHD1O75717 1129 aaPredicted RBP9.59□□□□□ -0.87
C2CD3-215ENST00000540452 CCDC192P0DO97 292 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 TOP1P11387 765 aaKnown RBP9.59□□□□□ -0.87
C2CD3-215ENST00000540452 XRCC6P12956 609 aaKnown RBP eCLIP9.59□□□□□ -0.87
C2CD3-215ENST00000540452 CALML3P27482 149 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 TFAP4Q01664 338 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 FAM160A1Q05DH4 1040 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 CCDC173Q0VFZ6 552 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 GNL2Q13823 731 aaKnown RBP9.59□□□□□ -0.87
C2CD3-215ENST00000540452 GRM4Q14833 912 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 GRIK5Q16478 980 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 MAP3K11Q16584 847 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 FKBP1CQ5VVH2 108 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 ANO1Q5XXA6 986 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 MSL1Q68DK7 614 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 CCDC73Q6ZRK6 1079 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 GAS2L3Q86XJ1 694 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 CERS5Q8N5B7 392 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 MTMR14Q8NCE2 650 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 PNMA1Q8ND90 353 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 NKX2-3Q8TAU0 364 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 TIGD1Q96MW7 591 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 GPR101Q96P66 508 aaPredicted RBP9.59□□□□□ -0.87
C2CD3-215ENST00000540452 USP28Q96RU2 1077 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 PHF20Q9BVI0 1012 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 MTFR1LQ9H019 292 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 OSBPL5Q9H0X9 879 aaPredicted RBP9.59□□□□□ -0.87
C2CD3-215ENST00000540452 CLSTN2Q9H4D0 955 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 SENP2Q9HC62 589 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 INCENPQ9NQS7 918 aa9.59□□□□□ -0.87
C2CD3-215ENST00000540452 LTBP3Q9NS15 1303 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 CYP2D7A0A087X1C5 515 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 SYCE3A1L190 88 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 RIMBP2O15034 1052 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 SPTLC2O15270 562 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 ENTPD3O75355 529 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 CMA1P23946 247 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 CRKP46108 304 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 STK38Q15208 465 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 PFKFB3Q16875 520 aaPredicted RBP9.58□□□□□ -0.88
C2CD3-215ENST00000540452 ASPRV1Q53RT3 343 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 HS1BP3Q53T59 392 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 APOBEC3HQ6NTF7 200 aaKnown RBP9.58□□□□□ -0.88
C2CD3-215ENST00000540452 MAPKAPK5Q8IW41 473 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 ZNF579Q8NAF0 562 aaKnown RBP9.58□□□□□ -0.88
C2CD3-215ENST00000540452 DAGLBQ8NCG7 672 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 CCDC148Q8NFR7 591 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 BICD2Q8TD16 824 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 CCDC12Q8WUD4 166 aaPredicted RBP9.58□□□□□ -0.88
C2CD3-215ENST00000540452 MRPS27Q92552 414 aaKnown RBP9.58□□□□□ -0.88
C2CD3-215ENST00000540452 PHKBQ93100 1093 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 PGBD1Q96JS3 809 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 ZKSCAN3Q9BRR0 538 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 FUCA2Q9BTY2 467 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.58□□□□□ -0.88
C2CD3-215ENST00000540452 TFIP11Q9UBB9 837 aaKnown RBP9.58□□□□□ -0.88
C2CD3-215ENST00000540452 SERPINB13Q9UIV8 391 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 ARFGEF1Q9Y6D6 1849 aa9.58□□□□□ -0.88
C2CD3-215ENST00000540452 SIPA1L1O43166 1804 aa9.57□□□□□ -0.88
C2CD3-215ENST00000540452 IGKV6D-41A0A0C4DH26 115 aa9.57□□□□□ -0.88
C2CD3-215ENST00000540452 PALM3A6NDB9 673 aaPredicted RBP9.57□□□□□ -0.88
C2CD3-215ENST00000540452 KINO60870 393 aaKnown RBP9.57□□□□□ -0.88
C2CD3-215ENST00000540452 CUTAO60888 179 aa9.57□□□□□ -0.88
C2CD3-215ENST00000540452 PRDM1O75626 825 aa9.57□□□□□ -0.88
C2CD3-215ENST00000540452 VIL1P09327 827 aaKnown RBP9.57□□□□□ -0.88
C2CD3-215ENST00000540452 CYP2D6P10635 497 aa9.57□□□□□ -0.88
C2CD3-215ENST00000540452 SCG2P13521 617 aa9.57□□□□□ -0.88
C2CD3-215ENST00000540452 POLD1P28340 1107 aa9.57□□□□□ -0.88
C2CD3-215ENST00000540452 PLCD1P51178 756 aa9.57□□□□□ -0.88
C2CD3-215ENST00000540452 ORC2Q13416 577 aaPredicted RBP9.57□□□□□ -0.88
C2CD3-215ENST00000540452 PKN1Q16512 942 aa9.57□□□□□ -0.88
C2CD3-215ENST00000540452 FOXP4Q8IVH2 680 aaPredicted RBP9.57□□□□□ -0.88
C2CD3-215ENST00000540452 DIS3L2Q8IYB7 885 aaKnown RBP9.57□□□□□ -0.88
C2CD3-215ENST00000540452 AGBL3Q8NEM8 1001 aa9.57□□□□□ -0.88
C2CD3-215ENST00000540452 ENGASEQ8NFI3 743 aa9.57□□□□□ -0.88
C2CD3-215ENST00000540452 NUP133Q8WUM0 1156 aa9.57□□□□□ -0.88
C2CD3-215ENST00000540452 PPP1R9BQ96SB3 815 aa9.57□□□□□ -0.88
C2CD3-215ENST00000540452 PYM1Q9BRP8 204 aaKnown RBP9.57□□□□□ -0.88
C2CD3-215ENST00000540452 MYL10Q9BUA6 226 aa9.57□□□□□ -0.88
C2CD3-215ENST00000540452 TNMDQ9H2S6 317 aa9.57□□□□□ -0.88
C2CD3-215ENST00000540452 IL17RBQ9NRM6 502 aa9.57□□□□□ -0.88
C2CD3-215ENST00000540452 DACT1Q9NYF0 836 aa9.57□□□□□ -0.88
C2CD3-215ENST00000540452 NOL7Q9UMY1 257 aaKnown RBP9.57□□□□□ -0.88
C2CD3-215ENST00000540452 MYH4Q9Y623 1939 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 ESYT2A0FGR8 921 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 MYCNP04198 464 aaPredicted RBP9.56□□□□□ -0.88
C2CD3-215ENST00000540452 SNHG28P0DPA3 235 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 RXRAP19793 462 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 KRT2P35908 639 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 ME1P48163 572 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 PTPAQ15257 358 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 SF3A1Q15459 793 aaKnown RBP9.56□□□□□ -0.88
C2CD3-215ENST00000540452 DOK7Q18PE1 504 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 FOXD4L6Q3SYB3 417 aaPredicted RBP9.56□□□□□ -0.88
C2CD3-215ENST00000540452 FAM47AQ5JRC9 791 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 GPATCH4Q5T3I0 446 aaKnown RBP9.56□□□□□ -0.88
C2CD3-215ENST00000540452 CDC42EP5Q6NZY7 148 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 FAM173BQ6P4H8 233 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 FOXD4L3Q6VB84 417 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms