RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 PRKAB2O43741 272 aa10.85□□□□□ -0.67
LMO3-222ENST00000540445 SHMT1P34896 483 aa10.85□□□□□ -0.67
LMO3-222ENST00000540445 USP14P54578 494 aa10.85□□□□□ -0.67
LMO3-222ENST00000540445 RRP1P56182 461 aaKnown RBP10.85□□□□□ -0.67
LMO3-222ENST00000540445 UBE3CQ15386 1083 aa10.85□□□□□ -0.67
LMO3-222ENST00000540445 GPRC5AQ8NFJ5 357 aa10.85□□□□□ -0.67
LMO3-222ENST00000540445 ATP8A2Q9NTI2 1148 aa10.85□□□□□ -0.67
LMO3-222ENST00000540445 SLC4A4Q9Y6R1 1079 aa10.85□□□□□ -0.67
LMO3-222ENST00000540445 ZNFX1Q9P2E3 1918 aaKnown RBP10.85□□□□□ -0.67
LMO3-222ENST00000540445 USP17L12C9JPN9 530 aa10.84□□□□□ -0.67
LMO3-222ENST00000540445 USP17L21D6R901 530 aa10.84□□□□□ -0.67
LMO3-222ENST00000540445 CHGBP05060 677 aa10.84□□□□□ -0.67
LMO3-222ENST00000540445 CYP2D6P10635 497 aa10.84□□□□□ -0.67
LMO3-222ENST00000540445 ELNP15502 786 aa10.84□□□□□ -0.67
LMO3-222ENST00000540445 HERVK_113P62684 666 aa10.84□□□□□ -0.67
LMO3-222ENST00000540445 SEPT2Q15019 361 aa10.84□□□□□ -0.67
LMO3-222ENST00000540445 TSHZ3Q63HK5 1081 aa10.84□□□□□ -0.67
LMO3-222ENST00000540445 NKX2-3Q8TAU0 364 aa10.84□□□□□ -0.67
LMO3-222ENST00000540445 ACER1Q8TDN7 264 aa10.84□□□□□ -0.67
LMO3-222ENST00000540445 GCC1Q96CN9 775 aa10.84□□□□□ -0.67
LMO3-222ENST00000540445 C12orf42Q96LP6 360 aa10.84□□□□□ -0.67
LMO3-222ENST00000540445 CRBNQ96SW2 442 aa10.84□□□□□ -0.67
LMO3-222ENST00000540445 PAGR1Q9BTK6 254 aa10.84□□□□□ -0.67
LMO3-222ENST00000540445 PUS7LQ9H0K6 701 aaKnown RBP10.84□□□□□ -0.67
LMO3-222ENST00000540445 UNC93B1Q9H1C4 597 aa10.84□□□□□ -0.67
LMO3-222ENST00000540445 SWAP70Q9UH65 585 aa10.84□□□□□ -0.67
LMO3-222ENST00000540445 GJD2Q9UKL4 321 aa10.84□□□□□ -0.67
LMO3-222ENST00000540445 A0A0G2JMZ2 1700 aa10.84□□□□□ -0.67
LMO3-222ENST00000540445 USP17L15C9J2P7 530 aa10.83□□□□□ -0.68
LMO3-222ENST00000540445 USP17L13C9JLJ4 530 aa10.83□□□□□ -0.68
LMO3-222ENST00000540445 USP17L11C9JVI0 530 aa10.83□□□□□ -0.68
LMO3-222ENST00000540445 USP17L18D6R9N7 530 aa10.83□□□□□ -0.68
LMO3-222ENST00000540445 USP17L22D6RA61 530 aa10.83□□□□□ -0.68
LMO3-222ENST00000540445 USP17L17D6RBQ6 530 aa10.83□□□□□ -0.68
LMO3-222ENST00000540445 USP17L19D6RCP7 530 aa10.83□□□□□ -0.68
LMO3-222ENST00000540445 USP17L20D6RJB6 530 aa10.83□□□□□ -0.68
LMO3-222ENST00000540445 ERC2O15083 957 aa10.83□□□□□ -0.68
LMO3-222ENST00000540445 PEX10O60683 326 aa10.83□□□□□ -0.68
LMO3-222ENST00000540445 INHAP05111 366 aa10.83□□□□□ -0.68
LMO3-222ENST00000540445 EVX2Q03828 476 aa10.83□□□□□ -0.68
LMO3-222ENST00000540445 GABPAQ06546 454 aa10.83□□□□□ -0.68
LMO3-222ENST00000540445 USP17L24Q0WX57 530 aa10.83□□□□□ -0.68
LMO3-222ENST00000540445 Q3C1V9 767 aa10.83□□□□□ -0.68
LMO3-222ENST00000540445 POTEEQ6S8J3 1075 aa10.83□□□□□ -0.68
LMO3-222ENST00000540445 SLC44A5Q8NCS7 719 aa10.83□□□□□ -0.68
LMO3-222ENST00000540445 DYNLL2Q96FJ2 89 aa10.83□□□□□ -0.68
LMO3-222ENST00000540445 CWC22Q9HCG8 908 aaKnown RBP10.83□□□□□ -0.68
LMO3-222ENST00000540445 GREB1LQ9C091 1923 aaPredicted RBP10.83□□□□□ -0.68
LMO3-222ENST00000540445 COL11A1P12107 1806 aaPredicted RBP10.83□□□□□ -0.68
LMO3-222ENST00000540445 MYH4Q9Y623 1939 aa10.82□□□□□ -0.68
LMO3-222ENST00000540445 CYP2D7A0A087X1C5 515 aa10.82□□□□□ -0.68
LMO3-222ENST00000540445 RNF113AO15541 343 aaKnown RBP10.82□□□□□ -0.68
LMO3-222ENST00000540445 SGPL1O95470 568 aa10.82□□□□□ -0.68
LMO3-222ENST00000540445 TFRCP02786 760 aaKnown RBP10.82□□□□□ -0.68
LMO3-222ENST00000540445 APPP05067 770 aa10.82□□□□□ -0.68
LMO3-222ENST00000540445 GUCY1A2P33402 732 aa10.82□□□□□ -0.68
LMO3-222ENST00000540445 CDK8P49336 464 aa10.82□□□□□ -0.68
LMO3-222ENST00000540445 LRRFIP1Q32MZ4 808 aaKnown RBP10.82□□□□□ -0.68
LMO3-222ENST00000540445 ANKRD45Q5TZF3 282 aa10.82□□□□□ -0.68
LMO3-222ENST00000540445 C12orf60Q5U649 245 aa10.82□□□□□ -0.68
LMO3-222ENST00000540445 TMEM179Q6ZVK1 233 aa10.82□□□□□ -0.68
LMO3-222ENST00000540445 STK11IPQ8N1F8 1099 aa10.82□□□□□ -0.68
LMO3-222ENST00000540445 KBTBD3Q8NAB2 608 aa10.82□□□□□ -0.68
LMO3-222ENST00000540445 U2AF1L4Q8WU68 220 aaKnown RBP10.82□□□□□ -0.68
LMO3-222ENST00000540445 GTF3C2Q8WUA4 911 aaPredicted RBP10.82□□□□□ -0.68
LMO3-222ENST00000540445 KIAA1683Q9H0B3 1180 aa10.82□□□□□ -0.68
LMO3-222ENST00000540445 TXNRD2Q9NNW7 524 aa10.82□□□□□ -0.68
LMO3-222ENST00000540445 PAK6Q9NQU5 681 aaPredicted RBP10.82□□□□□ -0.68
LMO3-222ENST00000540445 RBPJLQ9UBG7 517 aa10.82□□□□□ -0.68
LMO3-222ENST00000540445 TTC41PQ6P2S7 1318 aa10.82□□□□□ -0.68
LMO3-222ENST00000540445 MINDY4BA8MYZ0 360 aa10.81□□□□□ -0.68
LMO3-222ENST00000540445 ZFYP08048 801 aaPredicted RBP10.81□□□□□ -0.68
LMO3-222ENST00000540445 CAPN2P17655 700 aa10.81□□□□□ -0.68
LMO3-222ENST00000540445 VCAM1P19320 739 aa10.81□□□□□ -0.68
LMO3-222ENST00000540445 CYP2B6P20813 491 aa10.81□□□□□ -0.68
LMO3-222ENST00000540445 MAPK4P31152 587 aa10.81□□□□□ -0.68
LMO3-222ENST00000540445 ERVK-9P63128 1117 aa10.81□□□□□ -0.68
LMO3-222ENST00000540445 ERVK-24P63145 666 aa10.81□□□□□ -0.68
LMO3-222ENST00000540445 ATP2B2Q01814 1243 aa10.81□□□□□ -0.68
LMO3-222ENST00000540445 HABP4Q5JVS0 413 aaKnown RBP10.81□□□□□ -0.68
LMO3-222ENST00000540445 WDR78Q5VTH9 848 aa10.81□□□□□ -0.68
LMO3-222ENST00000540445 CTR9Q6PD62 1173 aa10.81□□□□□ -0.68
LMO3-222ENST00000540445 CATSPERGQ6ZRH7 1159 aa10.81□□□□□ -0.68
LMO3-222ENST00000540445 CCDC17Q96LX7 622 aa10.81□□□□□ -0.68
LMO3-222ENST00000540445 STRBPQ96SI9 672 aaKnown RBP10.81□□□□□ -0.68
LMO3-222ENST00000540445 NUDT12Q9BQG2 462 aa10.81□□□□□ -0.68
LMO3-222ENST00000540445 CRISPLD2Q9H0B8 497 aa10.81□□□□□ -0.68
LMO3-222ENST00000540445 RPAP3Q9H6T3 665 aaPredicted RBP10.81□□□□□ -0.68
LMO3-222ENST00000540445 ARHGEF10LQ9HCE6 1279 aa10.81□□□□□ -0.68
LMO3-222ENST00000540445 ZNF236Q9UL36 1845 aa10.81□□□□□ -0.68
LMO3-222ENST00000540445 DNAH12Q6ZR08 3092 aa10.8□□□□□ -0.68
LMO3-222ENST00000540445 SMIM22K7EJ46 135 aa10.8□□□□□ -0.68
LMO3-222ENST00000540445 CNMDO75829 334 aa10.8□□□□□ -0.68
LMO3-222ENST00000540445 GLRX3O76003 335 aaKnown RBP10.8□□□□□ -0.68
LMO3-222ENST00000540445 AKR1B1P15121 316 aa10.8□□□□□ -0.68
LMO3-222ENST00000540445 CCNA1P78396 465 aa10.8□□□□□ -0.68
LMO3-222ENST00000540445 COG2Q14746 738 aa10.8□□□□□ -0.68
LMO3-222ENST00000540445 SAMD1Q6SPF0 538 aaPredicted RBP10.8□□□□□ -0.68
LMO3-222ENST00000540445 APPBP2Q92624 585 aa10.8□□□□□ -0.68
LMO3-222ENST00000540445 USP6NLQ92738 828 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms