RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 MIGA1Q8NAN2 632 aa15.21■□□□□ 0.03
COPS7A-211ENST00000540408 C12orf42Q96LP6 360 aa15.21■□□□□ 0.03
COPS7A-211ENST00000540408 CCDC8Q9H0W5 538 aaPredicted RBP15.21■□□□□ 0.03
COPS7A-211ENST00000540408 IVNS1ABPQ9Y6Y0 642 aa15.21■□□□□ 0.03
COPS7A-211ENST00000540408 RANBP2P49792 3224 aaKnown RBP15.21■□□□□ 0.03
COPS7A-211ENST00000540408 CCND3P30281 292 aaPredicted RBP15.2■□□□□ 0.02
COPS7A-211ENST00000540408 MAP2K5Q13163 448 aa15.2■□□□□ 0.02
COPS7A-211ENST00000540408 CCL14Q16627 93 aa15.2■□□□□ 0.02
COPS7A-211ENST00000540408 ABCB5Q2M3G0 1257 aa15.2■□□□□ 0.02
COPS7A-211ENST00000540408 SHROOM1Q2M3G4 852 aaPredicted RBP15.2■□□□□ 0.02
COPS7A-211ENST00000540408 DEFB123Q8N688 67 aa15.2■□□□□ 0.02
COPS7A-211ENST00000540408 MAGEB6Q8N7X4 407 aa15.2■□□□□ 0.02
COPS7A-211ENST00000540408 EHD4Q9H223 541 aa15.2■□□□□ 0.02
COPS7A-211ENST00000540408 DBNLQ9UJU6 430 aaKnown RBP15.2■□□□□ 0.02
COPS7A-211ENST00000540408 NOP58Q9Y2X3 529 aaKnown RBP15.2■□□□□ 0.02
COPS7A-211ENST00000540408 MAST2Q6P0Q8 1798 aa15.19■□□□□ 0.02
COPS7A-211ENST00000540408 SLC15A5A6NIM6 579 aa15.19■□□□□ 0.02
COPS7A-211ENST00000540408 MSCO60682 206 aa15.19■□□□□ 0.02
COPS7A-211ENST00000540408 ATP2B2Q01814 1243 aa15.19■□□□□ 0.02
COPS7A-211ENST00000540408 LHX8Q68G74 356 aa15.19■□□□□ 0.02
COPS7A-211ENST00000540408 CATSPERGQ6ZRH7 1159 aa15.19■□□□□ 0.02
COPS7A-211ENST00000540408 ITPRIPQ8IWB1 547 aa15.19■□□□□ 0.02
COPS7A-211ENST00000540408 KIAA1683Q9H0B3 1180 aa15.19■□□□□ 0.02
COPS7A-211ENST00000540408 C1orf115Q9H7X2 142 aa15.19■□□□□ 0.02
COPS7A-211ENST00000540408 PFASO15067 1338 aa15.18■□□□□ 0.02
COPS7A-211ENST00000540408 DDX60LQ5H9U9 1706 aaKnown RBP15.18■□□□□ 0.02
COPS7A-211ENST00000540408 PLXNB2O15031 1838 aa15.18■□□□□ 0.02
COPS7A-211ENST00000540408 SIPA1L1O43166 1804 aa15.18■□□□□ 0.02
COPS7A-211ENST00000540408 ALPK3Q96L96 1907 aa15.18■□□□□ 0.02
COPS7A-211ENST00000540408 POLR3DP05423 398 aaPredicted RBP15.18■□□□□ 0.02
COPS7A-211ENST00000540408 COL6A1P12109 1028 aa15.18■□□□□ 0.02
COPS7A-211ENST00000540408 CNGA1P29973 690 aa15.18■□□□□ 0.02
COPS7A-211ENST00000540408 ERC1Q8IUD2 1116 aa15.18■□□□□ 0.02
COPS7A-211ENST00000540408 EAF2Q96CJ1 260 aaPredicted RBP15.18■□□□□ 0.02
COPS7A-211ENST00000540408 VCAM1P19320 739 aa15.17■□□□□ 0.02
COPS7A-211ENST00000540408 PTPREP23469 700 aa15.17■□□□□ 0.02
COPS7A-211ENST00000540408 LBX2Q6XYB7 198 aa15.17■□□□□ 0.02
COPS7A-211ENST00000540408 LBHD1Q9BQE6 289 aaPredicted RBP15.17■□□□□ 0.02
COPS7A-211ENST00000540408 SENP6Q9GZR1 1112 aaPredicted RBP15.17■□□□□ 0.02
COPS7A-211ENST00000540408 TLR7Q9NYK1 1049 aaKnown RBP15.17■□□□□ 0.02
COPS7A-211ENST00000540408 PRKAG2Q9UGJ0 569 aa15.17■□□□□ 0.02
COPS7A-211ENST00000540408 NDUFB9Q9Y6M9 179 aa15.17■□□□□ 0.02
COPS7A-211ENST00000540408 FOCADQ5VW36 1801 aa15.16■□□□□ 0.02
COPS7A-211ENST00000540408 CNMDO75829 334 aa15.16■□□□□ 0.02
COPS7A-211ENST00000540408 TTF1Q15361 905 aaPredicted RBP15.16■□□□□ 0.02
COPS7A-211ENST00000540408 LRRC26Q2I0M4 334 aa15.16■□□□□ 0.02
COPS7A-211ENST00000540408 RPAP3Q9H6T3 665 aaPredicted RBP15.16■□□□□ 0.02
COPS7A-211ENST00000540408 HOXC10Q9NYD6 342 aa15.16■□□□□ 0.02
COPS7A-211ENST00000540408 MAGEB6P1A0A0J9YX57 407 aa15.15■□□□□ 0.02
COPS7A-211ENST00000540408 MPHOSPH10O00566 681 aaKnown RBP15.15■□□□□ 0.02
COPS7A-211ENST00000540408 MDM2Q00987 491 aaPredicted RBP15.15■□□□□ 0.02
COPS7A-211ENST00000540408 COG2Q14746 738 aa15.15■□□□□ 0.02
COPS7A-211ENST00000540408 HSP90AB4PQ58FF6 505 aa15.15■□□□□ 0.02
COPS7A-211ENST00000540408 POTEEQ6S8J3 1075 aa15.15■□□□□ 0.02
COPS7A-211ENST00000540408 DPP9Q86TI2 863 aa15.15■□□□□ 0.02
COPS7A-211ENST00000540408 AACSQ86V21 672 aa15.15■□□□□ 0.02
COPS7A-211ENST00000540408 ACER1Q8TDN7 264 aa15.15■□□□□ 0.02
COPS7A-211ENST00000540408 LPAR1Q92633 364 aa15.15■□□□□ 0.02
COPS7A-211ENST00000540408 CRNKL1Q9BZJ0 848 aaKnown RBP15.15■□□□□ 0.02
COPS7A-211ENST00000540408 SLC5A4Q9NY91 659 aa15.15■□□□□ 0.02
COPS7A-211ENST00000540408 DDX20Q9UHI6 824 aaKnown RBP15.15■□□□□ 0.02
COPS7A-211ENST00000540408 STXBP5LQ9Y2K9 1186 aa15.15■□□□□ 0.02
COPS7A-211ENST00000540408 CDK5RAP2Q96SN8 1893 aa15.14■□□□□ 0.01
COPS7A-211ENST00000540408 MYH1P12882 1939 aa15.14■□□□□ 0.01
COPS7A-211ENST00000540408 STRNO43815 780 aa15.14■□□□□ 0.01
COPS7A-211ENST00000540408 HOXC6P09630 235 aa15.14■□□□□ 0.01
COPS7A-211ENST00000540408 PLCD1P51178 756 aa15.14■□□□□ 0.01
COPS7A-211ENST00000540408 GRB14Q14449 540 aa15.14■□□□□ 0.01
COPS7A-211ENST00000540408 Q7L0L9 218 aa15.14■□□□□ 0.01
COPS7A-211ENST00000540408 ARRDC4Q8NCT1 418 aa15.14■□□□□ 0.01
COPS7A-211ENST00000540408 ANTXR1Q9H6X2 564 aa15.14■□□□□ 0.01
COPS7A-211ENST00000540408 MCM9Q9NXL9 1143 aa15.14■□□□□ 0.01
COPS7A-211ENST00000540408 FLRT1Q9NZU1 646 aa15.14■□□□□ 0.01
COPS7A-211ENST00000540408 BTBD7Q9P203 1132 aa15.14■□□□□ 0.01
COPS7A-211ENST00000540408 SPDYE16A6NNV3 312 aaPredicted RBP15.13■□□□□ 0.01
COPS7A-211ENST00000540408 DNM1LO00429 736 aa15.13■□□□□ 0.01
COPS7A-211ENST00000540408 SHMT1P34896 483 aa15.13■□□□□ 0.01
COPS7A-211ENST00000540408 SLC9C2Q5TAH2 1124 aa15.13■□□□□ 0.01
COPS7A-211ENST00000540408 MTMR10Q9NXD2 777 aa15.13■□□□□ 0.01
COPS7A-211ENST00000540408 EXOC6BQ9Y2D4 811 aa15.13■□□□□ 0.01
COPS7A-211ENST00000540408 MYO5AQ9Y4I1 1855 aaKnown RBP15.12■□□□□ 0.01
COPS7A-211ENST00000540408 CYP2C19P33261 490 aa15.12■□□□□ 0.01
COPS7A-211ENST00000540408 SEPT2Q15019 361 aa15.12■□□□□ 0.01
COPS7A-211ENST00000540408 CEP85Q6P2H3 762 aa15.12■□□□□ 0.01
COPS7A-211ENST00000540408 NPLOC4Q8TAT6 608 aa15.12■□□□□ 0.01
COPS7A-211ENST00000540408 RIOK1Q9BRS2 568 aaKnown RBP15.12■□□□□ 0.01
COPS7A-211ENST00000540408 TANGO6Q9C0B7 1094 aa15.12■□□□□ 0.01
COPS7A-211ENST00000540408 KBTBD13C9JR72 458 aa15.11■□□□□ 0.01
COPS7A-211ENST00000540408 ATN1P54259 1190 aaPredicted RBP15.11■□□□□ 0.01
COPS7A-211ENST00000540408 CLASRPQ8N2M8 674 aaKnown RBP15.11■□□□□ 0.01
COPS7A-211ENST00000540408 MB21D1Q8N884 522 aa15.11■□□□□ 0.01
COPS7A-211ENST00000540408 SWAP70Q9UH65 585 aa15.11■□□□□ 0.01
COPS7A-211ENST00000540408 ADORA2AP29274 412 aa15.1■□□□□ 0.01
COPS7A-211ENST00000540408 GUCY1A2P33402 732 aa15.1■□□□□ 0.01
COPS7A-211ENST00000540408 GABPAQ06546 454 aa15.1■□□□□ 0.01
COPS7A-211ENST00000540408 PLS1Q14651 629 aa15.1■□□□□ 0.01
COPS7A-211ENST00000540408 OLFML2BQ68BL8 750 aa15.1■□□□□ 0.01
COPS7A-211ENST00000540408 TMEM179Q6ZVK1 233 aa15.1■□□□□ 0.01
COPS7A-211ENST00000540408 AMOTL1Q8IY63 956 aa15.1■□□□□ 0.01
COPS7A-211ENST00000540408 SHCBP1Q8NEM2 672 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms