RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 MAIP1Q8WWC4 291 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 FOXD4L4Q8WXT5 416 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-211ENST00000539921 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.88□□□□□ -1.316e-13■■□□□ 14.1
SNHG1-211ENST00000539921 NCSTNQ92542 709 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 DHX58Q96C10 678 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 SCLT1Q96NL6 688 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 BCL2L13Q9BXK5 485 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 VCX3BQ9H321 246 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 NOD2Q9HC29 1040 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 VCX3AQ9NNX9 186 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 STAP2Q9UGK3 403 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 FAM184BQ9ULE4 1060 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 TPCN1Q9ULQ1 816 aa6.88□□□□□ -1.31
SNHG1-211ENST00000539921 PAIP2BQ9ULR5 123 aaKnown RBP6.88□□□□□ -1.31
SNHG1-211ENST00000539921 TTF2Q9UNY4 1162 aaKnown RBP6.88□□□□□ -1.31
SNHG1-211ENST00000539921 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-211ENST00000539921 ABCC6O95255 1503 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 ADCY9O60503 1353 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 NUTM2FA1L443 756 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 CTAGE9A4FU28 777 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 GOLGA8AA7E2F4 631 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 WDR46O15213 610 aaKnown RBP6.87□□□□□ -1.31
SNHG1-211ENST00000539921 GALR2O43603 387 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-211ENST00000539921 PAEPP09466 180 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 CPA3P15088 417 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 ATP4AP20648 1035 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 GNAQP50148 359 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 FAM160A1Q05DH4 1040 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 SULT2A1Q06520 285 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 NEXNQ0ZGT2 675 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 TBX2Q13207 712 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-211ENST00000539921 ZNF268Q14587 947 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-211ENST00000539921 KRT72Q14CN4 511 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 ANKRD1Q15327 319 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 ANKRD20A8PQ5CZ79 823 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 NUTM2DQ5VT03 806 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-211ENST00000539921 CCDC70Q6NSX1 233 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 SYNE3Q6ZMZ3 975 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 C11orf57Q6ZUT1 292 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-211ENST00000539921 CACNA2D4Q7Z3S7 1137 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 LMNTD2Q8IXW0 634 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 CKAP2LQ8IYA6 745 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 CCDC12Q8WUD4 166 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-211ENST00000539921 SLC35B4Q969S0 331 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 CCDC51Q96ER9 411 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 L3MBTL3Q96JM7 780 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-211ENST00000539921 FAM81BQ96LP2 452 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 PANX2Q96RD6 677 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 MTA3Q9BTC8 594 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 XPO4Q9C0E2 1151 aaKnown RBP6.87□□□□□ -1.31
SNHG1-211ENST00000539921 BRD8Q9H0E9 1235 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 VCXQ9H320 206 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 RABEP2Q9H5N1 569 aa6.87□□□□□ -1.31
SNHG1-211ENST00000539921 BMP2KQ9NSY1 1161 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-211ENST00000539921 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.87□□□□□ -1.31
SNHG1-211ENST00000539921 ARHGEF40Q8TER5 1519 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 ERVK-7P63135 1459 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 ABCC12Q96J65 1359 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 A0A1W2PQ27 194 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 A0A1W2PQ64 194 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 A0A1W2PQD8 194 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 SMIM24O75264 130 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 FCHSD2O94868 740 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 TROVE2P10155 538 aaKnown RBP eCLIP6.86□□□□□ -1.31
SNHG1-211ENST00000539921 NAT1P18440 290 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 CYP11B2P19099 503 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 EIF4BP23588 611 aaKnown RBP6.86□□□□□ -1.31
SNHG1-211ENST00000539921 SMARCA1P28370 1054 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 GJB2P29033 226 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 LSP1P33241 339 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 KRT9P35527 623 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 TIE1P35590 1138 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 CTCFP49711 727 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-211ENST00000539921 ACADVLP49748 655 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 PDE1AP54750 535 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 RAB15P59190 212 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 MPP3Q13368 585 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 BYSLQ13895 437 aaKnown RBP6.86□□□□□ -1.31
SNHG1-211ENST00000539921 PTGISQ16647 500 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 SPECC1Q5M775 1068 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 NBPF14Q5TI25 921 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 ZNF662Q6ZS27 426 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 ZNF572Q7Z3I7 529 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-211ENST00000539921 NME8Q8N427 588 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 MREGQ8N565 214 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 EIF1ADQ8N9N8 165 aaKnown RBP6.86□□□□□ -1.31
SNHG1-211ENST00000539921 ATP11CQ8NB49 1132 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 SMC1BQ8NDV3 1235 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 WDR66Q8TBY9 1149 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 MYCBPAPQ8TBZ2 947 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 ZNF473Q8WTR7 871 aaKnown RBP6.86□□□□□ -1.31
SNHG1-211ENST00000539921 KCNN1Q92952 543 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 CAVIN3Q969G5 261 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 GFM2Q969S9 779 aaKnown RBP6.86□□□□□ -1.31
SNHG1-211ENST00000539921 ZNF653Q96CK0 615 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 DDX27Q96GQ7 796 aaKnown RBP6.86□□□□□ -1.31
SNHG1-211ENST00000539921 WDR24Q96S15 920 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 NUP58Q9BVL2 599 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 YIPF2Q9BWQ6 316 aa6.86□□□□□ -1.31
SNHG1-211ENST00000539921 MAK16Q9BXY0 300 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms