RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 NFIAQ12857 509 aa25.98■■□□□ 1.75
HOMER3-204ENST00000539827 STK38Q15208 465 aa25.98■■□□□ 1.75
HOMER3-204ENST00000539827 NEDD1Q8NHV4 660 aa25.98■■□□□ 1.75
HOMER3-204ENST00000539827 MRIQ9BWK5 157 aa25.98■■□□□ 1.75
HOMER3-204ENST00000539827 OSBPL5Q9H0X9 879 aaPredicted RBP25.98■■□□□ 1.75
HOMER3-204ENST00000539827 CNTNAP5Q8WYK1 1306 aa25.97■■□□□ 1.75
HOMER3-204ENST00000539827 U2AF2P26368 475 aaKnown RBP eCLIP25.97■■□□□ 1.754e-7■■■□□ 17.8
HOMER3-204ENST00000539827 TMEM47Q9BQJ4 181 aa25.97■■□□□ 1.75
HOMER3-204ENST00000539827 TSPY26PQ9H489 355 aa25.97■■□□□ 1.75
HOMER3-204ENST00000539827 STX8Q9UNK0 236 aa25.97■■□□□ 1.75
HOMER3-204ENST00000539827 MTMR7Q9Y216 660 aa25.97■■□□□ 1.75
HOMER3-204ENST00000539827 BTBD18B2RXH4 712 aa25.96■■□□□ 1.75
HOMER3-204ENST00000539827 LETM1O95202 739 aaPredicted RBP25.96■■□□□ 1.75
HOMER3-204ENST00000539827 ME1P48163 572 aa25.96■■□□□ 1.75
HOMER3-204ENST00000539827 CACNB3P54284 484 aa25.96■■□□□ 1.75
HOMER3-204ENST00000539827 SAFBQ15424 915 aaKnown RBP eCLIP25.96■■□□□ 1.75
HOMER3-204ENST00000539827 GRIPAP1Q4V328 841 aa25.96■■□□□ 1.75
HOMER3-204ENST00000539827 LINC00301Q8NCQ3 95 aa25.96■■□□□ 1.75
HOMER3-204ENST00000539827 ZNF277Q9NRM2 450 aaPredicted RBP25.96■■□□□ 1.75
HOMER3-204ENST00000539827 DACT1Q9NYF0 836 aa25.96■■□□□ 1.75
HOMER3-204ENST00000539827 HDLBPQ00341 1268 aaKnown RBP25.96■■□□□ 1.75
HOMER3-204ENST00000539827 ANO1Q5XXA6 986 aa25.96■■□□□ 1.75
HOMER3-204ENST00000539827 DIS3L2Q8IYB7 885 aaKnown RBP25.96■■□□□ 1.75
HOMER3-204ENST00000539827 SHISA4Q96DD7 197 aa25.96■■□□□ 1.75
HOMER3-204ENST00000539827 POLR3EQ9NVU0 708 aa25.96■■□□□ 1.75
HOMER3-204ENST00000539827 VPS54Q9P1Q0 977 aa25.96■■□□□ 1.75
HOMER3-204ENST00000539827 NASPP49321 788 aaPredicted RBP25.95■■□□□ 1.75
HOMER3-204ENST00000539827 GABPAQ06546 454 aa25.95■■□□□ 1.75
HOMER3-204ENST00000539827 ZFPM1Q8IX07 1006 aa25.95■■□□□ 1.75
HOMER3-204ENST00000539827 CCAR1Q8IX12 1150 aaKnown RBP25.95■■□□□ 1.75
HOMER3-204ENST00000539827 PIBF1Q8WXW3 757 aa25.95■■□□□ 1.75
HOMER3-204ENST00000539827 PSMD1Q99460 953 aa25.95■■□□□ 1.75
HOMER3-204ENST00000539827 PCDHA7Q9UN72 937 aa25.95■■□□□ 1.75
HOMER3-204ENST00000539827 KIF13BQ9NQT8 1826 aa25.95■■□□□ 1.74
HOMER3-204ENST00000539827 NR1I2O75469 434 aa25.95■■□□□ 1.74
HOMER3-204ENST00000539827 KIF5BP33176 963 aa25.95■■□□□ 1.74
HOMER3-204ENST00000539827 SF3A1Q15459 793 aaKnown RBP25.95■■□□□ 1.74
HOMER3-204ENST00000539827 YEATS4O95619 227 aa25.94■■□□□ 1.74
HOMER3-204ENST00000539827 GRM4Q14833 912 aa25.94■■□□□ 1.74
HOMER3-204ENST00000539827 STAG2Q8N3U4 1231 aa25.94■■□□□ 1.74
HOMER3-204ENST00000539827 LARGE2Q8N3Y3 721 aa25.94■■□□□ 1.74
HOMER3-204ENST00000539827 NUP62CLQ9H1M0 184 aa25.94■■□□□ 1.74
HOMER3-204ENST00000539827 POLD1P28340 1107 aa25.93■■□□□ 1.74
HOMER3-204ENST00000539827 CAMK4Q16566 473 aa25.93■■□□□ 1.74
HOMER3-204ENST00000539827 GOLPH3LQ9H4A5 285 aa25.93■■□□□ 1.74
HOMER3-204ENST00000539827 SERPINA10Q9UK55 444 aa25.93■■□□□ 1.74
HOMER3-204ENST00000539827 SPTLC2O15270 562 aa25.93■■□□□ 1.74
HOMER3-204ENST00000539827 TCP10Q12799 353 aa25.93■■□□□ 1.74
HOMER3-204ENST00000539827 NOSTRINQ8IVI9 506 aa25.93■■□□□ 1.74
HOMER3-204ENST00000539827 OXER1Q8TDS5 423 aa25.93■■□□□ 1.74
HOMER3-204ENST00000539827 UPF1Q92900 1129 aaKnown RBP eCLIP25.93■■□□□ 1.74
HOMER3-204ENST00000539827 CEP95Q96GE4 821 aa25.93■■□□□ 1.74
HOMER3-204ENST00000539827 AKR1B1P15121 316 aa25.92■■□□□ 1.74
HOMER3-204ENST00000539827 XBP1P17861 261 aa25.92■■□□□ 1.74
HOMER3-204ENST00000539827 NR5A1Q13285 461 aa25.92■■□□□ 1.74
HOMER3-204ENST00000539827 MAP3K14Q99558 947 aa25.92■■□□□ 1.74
HOMER3-204ENST00000539827 DDX19AQ9NUU7 478 aaKnown RBP25.92■■□□□ 1.74
HOMER3-204ENST00000539827 PIM2Q9P1W9 311 aa25.92■■□□□ 1.74
HOMER3-204ENST00000539827 MAD2L2Q9UI95 211 aa25.92■■□□□ 1.74
HOMER3-204ENST00000539827 SERPINB13Q9UIV8 391 aa25.92■■□□□ 1.74
HOMER3-204ENST00000539827 RAD17O75943 681 aa25.91■■□□□ 1.74
HOMER3-204ENST00000539827 HLA-DOAP06340 250 aa25.91■■□□□ 1.74
HOMER3-204ENST00000539827 SLURP2P0DP57 97 aa25.91■■□□□ 1.74
HOMER3-204ENST00000539827 TGFB2P61812 414 aa25.91■■□□□ 1.74
HOMER3-204ENST00000539827 KCNG4Q8TDN1 519 aa25.91■■□□□ 1.74
HOMER3-204ENST00000539827 MTFR1LQ9H019 292 aa25.91■■□□□ 1.74
HOMER3-204ENST00000539827 FOXP1Q9H334 677 aaPredicted RBP25.91■■□□□ 1.74
HOMER3-204ENST00000539827 R3HDM1Q15032 1099 aaKnown RBP25.91■■□□□ 1.74
HOMER3-204ENST00000539827 CFAP100Q494V2 611 aa25.91■■□□□ 1.74
HOMER3-204ENST00000539827 RNF214Q8ND24 703 aa25.91■■□□□ 1.74
HOMER3-204ENST00000539827 COL4A5P29400 1685 aa25.9■■□□□ 1.74
HOMER3-204ENST00000539827 FSIP1Q8NA03 581 aa25.9■■□□□ 1.74
HOMER3-204ENST00000539827 PHF20Q9BVI0 1012 aa25.9■■□□□ 1.74
HOMER3-204ENST00000539827 CLSTN2Q9H4D0 955 aa25.9■■□□□ 1.74
HOMER3-204ENST00000539827 PPP1R1BQ9UD71 204 aaPredicted RBP25.9■■□□□ 1.74
HOMER3-204ENST00000539827 FAM198AQ9UFP1 575 aa25.9■■□□□ 1.74
HOMER3-204ENST00000539827 SWAP70Q9UH65 585 aa25.9■■□□□ 1.74
HOMER3-204ENST00000539827 BAZ2BQ9UIF8 2168 aaKnown RBP25.9■■□□□ 1.74
HOMER3-204ENST00000539827 RASGRP2Q7LDG7 609 aa25.89■■□□□ 1.74
HOMER3-204ENST00000539827 TDRD3Q9H7E2 651 aaKnown RBP25.89■■□□□ 1.74
HOMER3-204ENST00000539827 PSMD14O00487 310 aa25.89■■□□□ 1.73
HOMER3-204ENST00000539827 VEGFAP15692 232 aaPredicted RBP25.89■■□□□ 1.73
HOMER3-204ENST00000539827 SHMT1P34896 483 aa25.89■■□□□ 1.73
HOMER3-204ENST00000539827 SLC39A14Q15043 492 aa25.89■■□□□ 1.73
HOMER3-204ENST00000539827 ADALQ6DHV7 355 aa25.89■■□□□ 1.73
HOMER3-204ENST00000539827 RSBN1LQ6PCB5 846 aaPredicted RBP25.89■■□□□ 1.73
HOMER3-204ENST00000539827 IDI2Q9BXS1 227 aa25.89■■□□□ 1.73
HOMER3-204ENST00000539827 TNMDQ9H2S6 317 aa25.89■■□□□ 1.73
HOMER3-204ENST00000539827 MYH8P13535 1937 aa25.88■■□□□ 1.73
HOMER3-204ENST00000539827 TOP1P11387 765 aaKnown RBP25.88■■□□□ 1.73
HOMER3-204ENST00000539827 SCG2P13521 617 aa25.88■■□□□ 1.73
HOMER3-204ENST00000539827 MARCKSP29966 332 aaPredicted RBP25.88■■□□□ 1.73
HOMER3-204ENST00000539827 CCDC73Q6ZRK6 1079 aa25.88■■□□□ 1.73
HOMER3-204ENST00000539827 DDTLA6NHG4 134 aaPredicted RBP25.87■■□□□ 1.73
HOMER3-204ENST00000539827 GOLGA8HP0CJ92 632 aa25.87■■□□□ 1.73
HOMER3-204ENST00000539827 GNAQP50148 359 aa25.87■■□□□ 1.73
HOMER3-204ENST00000539827 PTPAQ15257 358 aa25.87■■□□□ 1.73
HOMER3-204ENST00000539827 MAP3K11Q16584 847 aa25.87■■□□□ 1.73
HOMER3-204ENST00000539827 FUCA2Q9BTY2 467 aa25.87■■□□□ 1.73
HOMER3-204ENST00000539827 PSME4Q14997 1843 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms