RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 NUP133Q8WUM0 1156 aa18.89■□□□□ 0.61
TRAF3-204ENST00000539721 IGKV6D-41A0A0C4DH26 115 aa18.88■□□□□ 0.61
TRAF3-204ENST00000539721 DHX16O60231 1041 aaKnown RBP18.88■□□□□ 0.61
TRAF3-204ENST00000539721 GDF11O95390 407 aa18.88■□□□□ 0.61
TRAF3-204ENST00000539721 DDIT3P35638 169 aa18.88■□□□□ 0.61
TRAF3-204ENST00000539721 RCAN1P53805 252 aa18.88■□□□□ 0.61
TRAF3-204ENST00000539721 ABCB5Q2M3G0 1257 aa18.88■□□□□ 0.61
TRAF3-204ENST00000539721 DCPSQ96C86 337 aaKnown RBP18.88■□□□□ 0.61
TRAF3-204ENST00000539721 LLPHQ9BRT6 129 aaKnown RBP18.88■□□□□ 0.61
TRAF3-204ENST00000539721 PPP2R3BQ9Y5P8 575 aa18.88■□□□□ 0.61
TRAF3-204ENST00000539721 NID2Q14112 1375 aa18.88■□□□□ 0.61
TRAF3-204ENST00000539721 MYH4Q9Y623 1939 aa18.88■□□□□ 0.61
TRAF3-204ENST00000539721 CPLX1O14810 134 aa18.88■□□□□ 0.61
TRAF3-204ENST00000539721 DTNBO60941 627 aa18.88■□□□□ 0.61
TRAF3-204ENST00000539721 DDAH1O94760 285 aa18.88■□□□□ 0.61
TRAF3-204ENST00000539721 CALM1P0DP23 149 aa18.88■□□□□ 0.61
TRAF3-204ENST00000539721 CALM2P0DP24 149 aa18.88■□□□□ 0.61
TRAF3-204ENST00000539721 CALM3P0DP25 149 aa18.88■□□□□ 0.61
TRAF3-204ENST00000539721 GJB2P29033 226 aa18.88■□□□□ 0.61
TRAF3-204ENST00000539721 TMEM47Q9BQJ4 181 aa18.88■□□□□ 0.61
TRAF3-204ENST00000539721 MTMR4Q9NYA4 1195 aa18.88■□□□□ 0.61
TRAF3-204ENST00000539721 MAP3K10Q02779 954 aa18.87■□□□□ 0.61
TRAF3-204ENST00000539721 RTN1Q16799 776 aa18.87■□□□□ 0.61
TRAF3-204ENST00000539721 PPP4R3BQ5MIZ7 849 aa18.87■□□□□ 0.61
TRAF3-204ENST00000539721 NBPF12Q5TAG4 269 aaPredicted RBP18.87■□□□□ 0.61
TRAF3-204ENST00000539721 TMEM179Q6ZVK1 233 aa18.87■□□□□ 0.61
TRAF3-204ENST00000539721 PNMA1Q8ND90 353 aa18.87■□□□□ 0.61
TRAF3-204ENST00000539721 NSUN7Q8NE18 718 aaKnown RBP18.87■□□□□ 0.61
TRAF3-204ENST00000539721 CABP5Q9NP86 173 aa18.87■□□□□ 0.61
TRAF3-204ENST00000539721 CHMP5Q9NZZ3 219 aa18.87■□□□□ 0.61
TRAF3-204ENST00000539721 TOP1P11387 765 aaKnown RBP18.86■□□□□ 0.61
TRAF3-204ENST00000539721 CDC27P30260 824 aa18.86■□□□□ 0.61
TRAF3-204ENST00000539721 NOVP48745 357 aa18.86■□□□□ 0.61
TRAF3-204ENST00000539721 RRP1BQ14684 758 aaKnown RBP18.86■□□□□ 0.61
TRAF3-204ENST00000539721 SHROOM1Q2M3G4 852 aaPredicted RBP18.86■□□□□ 0.61
TRAF3-204ENST00000539721 CLEC10AQ8IUN9 316 aa18.86■□□□□ 0.61
TRAF3-204ENST00000539721 HOOK2Q96ED9 719 aa18.86■□□□□ 0.61
TRAF3-204ENST00000539721 TAF1DQ9H5J8 278 aaPredicted RBP18.86■□□□□ 0.61
TRAF3-204ENST00000539721 CIZ1Q9ULV3 898 aaPredicted RBP18.86■□□□□ 0.61
TRAF3-204ENST00000539721 ATAD5Q96QE3 1844 aa18.86■□□□□ 0.61
TRAF3-204ENST00000539721 JAK2O60674 1132 aa18.86■□□□□ 0.61
TRAF3-204ENST00000539721 CTDNEP1O95476 244 aa18.86■□□□□ 0.61
TRAF3-204ENST00000539721 TTLL1O95922 423 aa18.86■□□□□ 0.61
TRAF3-204ENST00000539721 ADD1P35611 737 aaKnown RBP18.86■□□□□ 0.61
TRAF3-204ENST00000539721 TROAPQ12815 778 aa18.86■□□□□ 0.61
TRAF3-204ENST00000539721 CPLX2Q6PUV4 134 aaKnown RBP18.86■□□□□ 0.61
TRAF3-204ENST00000539721 FANCBQ8NB91 859 aa18.86■□□□□ 0.61
TRAF3-204ENST00000539721 CCDC196A0A1B0GTZ2 297 aa18.85■□□□□ 0.61
TRAF3-204ENST00000539721 PTPDC1A2A3K4 754 aa18.85■□□□□ 0.61
TRAF3-204ENST00000539721 POTECB2RU33 542 aa18.85■□□□□ 0.61
TRAF3-204ENST00000539721 GH2P01242 217 aa18.85■□□□□ 0.61
TRAF3-204ENST00000539721 SEPT2Q15019 361 aa18.85■□□□□ 0.61
TRAF3-204ENST00000539721 EAPPQ56P03 285 aaPredicted RBP18.85■□□□□ 0.61
TRAF3-204ENST00000539721 PRAMEF18Q5VWM3 479 aa18.85■□□□□ 0.61
TRAF3-204ENST00000539721 DCAF15Q66K64 600 aa18.85■□□□□ 0.61
TRAF3-204ENST00000539721 SULF1Q8IWU6 871 aa18.85■□□□□ 0.61
TRAF3-204ENST00000539721 SMARCC2Q8TAQ2 1214 aa18.85■□□□□ 0.61
TRAF3-204ENST00000539721 KANSL2Q9H9L4 492 aa18.85■□□□□ 0.61
TRAF3-204ENST00000539721 FAM217BQ9NTX9 383 aaPredicted RBP18.85■□□□□ 0.61
TRAF3-204ENST00000539721 CLIP2Q9UDT6 1046 aa18.85■□□□□ 0.61
TRAF3-204ENST00000539721 CDKL5O76039 1030 aa18.84■□□□□ 0.61
TRAF3-204ENST00000539721 HMGN5P82970 282 aaKnown RBP18.84■□□□□ 0.61
TRAF3-204ENST00000539721 ATP2B2Q01814 1243 aa18.84■□□□□ 0.61
TRAF3-204ENST00000539721 RAB3GAP1Q15042 981 aa18.84■□□□□ 0.61
TRAF3-204ENST00000539721 PPP2R5BQ15173 497 aa18.84■□□□□ 0.61
TRAF3-204ENST00000539721 CTCFLQ8NI51 663 aaPredicted RBP18.84■□□□□ 0.61
TRAF3-204ENST00000539721 ZC3H15Q8WU90 426 aaKnown RBP18.84■□□□□ 0.61
TRAF3-204ENST00000539721 DDX11Q96FC9 970 aa18.84■□□□□ 0.61
TRAF3-204ENST00000539721 GUCY1A2P33402 732 aa18.83■□□□□ 0.61
TRAF3-204ENST00000539721 JAG1P78504 1218 aa18.83■□□□□ 0.61
TRAF3-204ENST00000539721 ICA1Q05084 483 aa18.83■□□□□ 0.61
TRAF3-204ENST00000539721 PNMA8AQ86V59 439 aaPredicted RBP18.83■□□□□ 0.61
TRAF3-204ENST00000539721 RBM28Q9NW13 759 aaKnown RBP18.83■□□□□ 0.61
TRAF3-204ENST00000539721 MTMR7Q9Y216 660 aa18.83■□□□□ 0.61
TRAF3-204ENST00000539721 ADM5C9JUS6 153 aa18.83■□□□□ 0.6
TRAF3-204ENST00000539721 PPFIA3O75145 1194 aa18.83■□□□□ 0.6
TRAF3-204ENST00000539721 CAP2P40123 477 aa18.83■□□□□ 0.6
TRAF3-204ENST00000539721 SUPT20HL1Q3ZLR7 823 aa18.83■□□□□ 0.6
TRAF3-204ENST00000539721 LRRC47Q8N1G4 583 aaKnown RBP18.83■□□□□ 0.6
TRAF3-204ENST00000539721 FAM184AQ8NB25 1140 aa18.83■□□□□ 0.6
TRAF3-204ENST00000539721 ZNF341Q9BYN7 854 aa18.83■□□□□ 0.6
TRAF3-204ENST00000539721 NYAP2Q9P242 653 aa18.83■□□□□ 0.6
TRAF3-204ENST00000539721 ZBTB21Q9ULJ3 1066 aa18.83■□□□□ 0.6
TRAF3-204ENST00000539721 EEF2P13639 858 aaKnown RBP18.82■□□□□ 0.6
TRAF3-204ENST00000539721 KIF5BP33176 963 aa18.82■□□□□ 0.6
TRAF3-204ENST00000539721 KRT26Q7Z3Y9 468 aa18.82■□□□□ 0.6
TRAF3-204ENST00000539721 MAP3K14Q99558 947 aa18.82■□□□□ 0.6
TRAF3-204ENST00000539721 PHF20L1A8MW92 1017 aa18.81■□□□□ 0.6
TRAF3-204ENST00000539721 NUCB2P80303 420 aa18.81■□□□□ 0.6
TRAF3-204ENST00000539721 GRM4Q14833 912 aa18.81■□□□□ 0.6
TRAF3-204ENST00000539721 NTRK3Q16288 839 aa18.81■□□□□ 0.6
TRAF3-204ENST00000539721 KIF3AQ9Y496 699 aa18.81■□□□□ 0.6
TRAF3-204ENST00000539721 SSC5DA1L4H1 1573 aa18.81■□□□□ 0.6
TRAF3-204ENST00000539721 MYH6P13533 1939 aa18.81■□□□□ 0.6
TRAF3-204ENST00000539721 IFNAR1P17181 557 aa18.81■□□□□ 0.6
TRAF3-204ENST00000539721 DOCK1Q14185 1865 aa18.81■□□□□ 0.6
TRAF3-204ENST00000539721 PDCP20941 246 aa18.8■□□□□ 0.6
TRAF3-204ENST00000539721 SSRP1Q08945 709 aaKnown RBP18.8■□□□□ 0.6
TRAF3-204ENST00000539721 LARP1BQ659C4 914 aaKnown RBP18.8■□□□□ 0.6
TRAF3-204ENST00000539721 CMTR1Q8N1G2 835 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms