RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 ESRRAP11474 423 aaPredicted RBP5.06□□□□□ -1.6
AC055720.1-201ENST00000539552 NPR3P17342 541 aa5.06□□□□□ -1.6
AC055720.1-201ENST00000539552 FMR1Q06787 632 aaKnown RBP eCLIP5.06□□□□□ -1.6
AC055720.1-201ENST00000539552 EHHADHQ08426 723 aa5.06□□□□□ -1.6
AC055720.1-201ENST00000539552 POU4F3Q15319 338 aa5.06□□□□□ -1.6
AC055720.1-201ENST00000539552 PLEKHG6Q3KR16 790 aa5.06□□□□□ -1.6
AC055720.1-201ENST00000539552 CAPN12Q6ZSI9 719 aa5.06□□□□□ -1.6
AC055720.1-201ENST00000539552 LCNL1Q6ZST4 164 aa5.06□□□□□ -1.6
AC055720.1-201ENST00000539552 TTLL10Q6ZVT0 673 aa5.06□□□□□ -1.6
AC055720.1-201ENST00000539552 CCAR1Q8IX12 1150 aaKnown RBP5.06□□□□□ -1.6
AC055720.1-201ENST00000539552 DUSP9Q99956 384 aaKnown RBP5.06□□□□□ -1.6
AC055720.1-201ENST00000539552 IRF2BPLQ9H1B7 796 aa5.06□□□□□ -1.6
AC055720.1-201ENST00000539552 PIDD1Q9HB75 910 aa5.06□□□□□ -1.6
AC055720.1-201ENST00000539552 FAM105AQ9NUU6 356 aa5.06□□□□□ -1.6
AC055720.1-201ENST00000539552 TERF2IPQ9NYB0 399 aa5.06□□□□□ -1.6
AC055720.1-201ENST00000539552 ADAMTS6Q9UKP5 1117 aa5.06□□□□□ -1.6
AC055720.1-201ENST00000539552 ADAMTS12P58397 1594 aa5.06□□□□□ -1.6
AC055720.1-201ENST00000539552 CDK12Q9NYV4 1490 aaPredicted RBP5.06□□□□□ -1.6
AC055720.1-201ENST00000539552 TNRC18O15417 2968 aaPredicted RBP5.05□□□□□ -1.6
AC055720.1-201ENST00000539552 TNFRSF10BO14763 440 aa5.05□□□□□ -1.6
AC055720.1-201ENST00000539552 FAM87AP0C7U9 286 aa5.05□□□□□ -1.6
AC055720.1-201ENST00000539552 MAOBP27338 520 aa5.05□□□□□ -1.6
AC055720.1-201ENST00000539552 AFMP43652 599 aa5.05□□□□□ -1.6
AC055720.1-201ENST00000539552 EIF1AXP47813 144 aaKnown RBP5.05□□□□□ -1.6
AC055720.1-201ENST00000539552 TMC4Q7Z404 712 aa5.05□□□□□ -1.6
AC055720.1-201ENST00000539552 FAM181AQ8N9Y4 354 aa5.05□□□□□ -1.6
AC055720.1-201ENST00000539552 FLAD1Q8NFF5 587 aa5.05□□□□□ -1.6
AC055720.1-201ENST00000539552 PMM1Q92871 262 aa5.05□□□□□ -1.6
AC055720.1-201ENST00000539552 FRMD6Q96NE9 622 aa5.05□□□□□ -1.6
AC055720.1-201ENST00000539552 PLCD4Q9BRC7 762 aa5.05□□□□□ -1.6
AC055720.1-201ENST00000539552 ZKSCAN3Q9BRR0 538 aa5.05□□□□□ -1.6
AC055720.1-201ENST00000539552 PCDH12Q9NPG4 1184 aa5.05□□□□□ -1.6
AC055720.1-201ENST00000539552 MAGI3Q5TCQ9 1506 aa5.05□□□□□ -1.6
AC055720.1-201ENST00000539552 RUSC2Q8N2Y8 1516 aa5.04□□□□□ -1.6
AC055720.1-201ENST00000539552 ARAP3Q8WWN8 1544 aa5.04□□□□□ -1.6
AC055720.1-201ENST00000539552 INHBBP09529 407 aa5.04□□□□□ -1.6
AC055720.1-201ENST00000539552 TMEM253P0C7T8 217 aa5.04□□□□□ -1.6
AC055720.1-201ENST00000539552 DNAJA1P31689 397 aaKnown RBP5.04□□□□□ -1.6
AC055720.1-201ENST00000539552 DNM1Q05193 864 aaKnown RBP5.04□□□□□ -1.6
AC055720.1-201ENST00000539552 PDE3AQ14432 1141 aa5.04□□□□□ -1.6
AC055720.1-201ENST00000539552 CIAPIN1Q6FI81 312 aa5.04□□□□□ -1.6
AC055720.1-201ENST00000539552 XKR5Q6UX68 686 aa5.04□□□□□ -1.6
AC055720.1-201ENST00000539552 CSRNP1Q96S65 589 aa5.04□□□□□ -1.6
AC055720.1-201ENST00000539552 ACBD3Q9H3P7 528 aa5.04□□□□□ -1.6
AC055720.1-201ENST00000539552 C1GALT1Q9NS00 363 aa5.04□□□□□ -1.6
AC055720.1-201ENST00000539552 UHRF1BP1Q6BDS2 1440 aa5.04□□□□□ -1.6
AC055720.1-201ENST00000539552 BCL9LQ86UU0 1499 aa5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 A0A0U1RQG5 324 aaPredicted RBP5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 ENPP3O14638 875 aa5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 PHACTR2O75167 634 aa5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 PPFIA4O75335 1185 aa5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 CEACAM5P06731 702 aa5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 PTMSP20962 102 aa5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 CD96P40200 585 aa5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 DAB2P98082 770 aa5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 ARID5AQ03989 594 aa5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 NFE2L2Q16236 605 aa5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 FAM26DQ5JW98 314 aa5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 WFDC3Q8IUB2 231 aa5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 CCDC146Q8IYE0 955 aa5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 LIN37Q96GY3 246 aaPredicted RBP5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 SGSM3Q96HU1 749 aa5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 NIF3L1Q9GZT8 377 aa5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 MKNK2Q9HBH9 465 aa5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 SPG7Q9UQ90 795 aa5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 INPP5FQ9Y2H2 1132 aa5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 LAS1LQ9Y4W2 734 aaKnown RBP5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 MRPL42Q9Y6G3 142 aaKnown RBP5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 ABCA5Q8WWZ7 1642 aa5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 SETD1BQ9UPS6 1966 aaKnown RBP5.03□□□□□ -1.6
AC055720.1-201ENST00000539552 CAMTA1Q9Y6Y1 1673 aa5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 PNMA6FA0A0J9YX94 578 aa5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 ZNF503-AS2A6NEH8 195 aa5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 S100BP04271 92 aaPredicted RBP5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 XRCC5P13010 732 aaKnown RBP5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 TNNI2P48788 182 aa5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 IKZF1Q13422 519 aa5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 BMS1Q14692 1282 aaKnown RBP5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 LONRF3Q496Y0 759 aa5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 TMEM67Q5HYA8 995 aa5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 FILIP1Q7Z7B0 1213 aa5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 C1QL4Q86Z23 238 aa5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 RPUSD2Q8IZ73 545 aaKnown RBP5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 ZNF654Q8IZM8 581 aa5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 FBXO15Q8NCQ5 510 aaPredicted RBP5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 FBF1Q8TES7 1133 aa5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 ASB11Q8WXH4 323 aa5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 EDEM1Q92611 657 aa5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 ALKBH8Q96BT7 664 aaKnown RBP5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 FAM161BQ96MY7 647 aa5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 BHLHE41Q9C0J9 482 aaPredicted RBP5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 TMX1Q9H3N1 280 aa5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 IFT57Q9NWB7 429 aa5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 GABBR1Q9UBS5 961 aa5.02□□□□□ -1.61
AC055720.1-201ENST00000539552 CAMSAP1Q5T5Y3 1602 aa5.01□□□□□ -1.61
AC055720.1-201ENST00000539552 RGS12O14924 1447 aa5.01□□□□□ -1.61
AC055720.1-201ENST00000539552 TCAF2A6NFQ2 919 aa5.01□□□□□ -1.61
AC055720.1-201ENST00000539552 ZBTB39O15060 712 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms