RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 PRKAB2O43741 272 aa11□□□□□ -0.65
CDH13-204ENST00000539548 OAS2P29728 719 aaKnown RBP11□□□□□ -0.65
CDH13-204ENST00000539548 TDO2P48775 406 aa11□□□□□ -0.65
CDH13-204ENST00000539548 RASGRF1Q13972 1273 aa11□□□□□ -0.65
CDH13-204ENST00000539548 RAD9BQ6WBX8 426 aa11□□□□□ -0.65
CDH13-204ENST00000539548 RASGRP2Q7LDG7 609 aa11□□□□□ -0.65
CDH13-204ENST00000539548 TXLNBQ8N3L3 684 aa11□□□□□ -0.65
CDH13-204ENST00000539548 IGSF22Q8N9C0 903 aa11□□□□□ -0.65
CDH13-204ENST00000539548 HELBQ8NG08 1087 aaPredicted RBP11□□□□□ -0.65
CDH13-204ENST00000539548 CCDC51Q96ER9 411 aa11□□□□□ -0.65
CDH13-204ENST00000539548 PAGE5Q96GU1 130 aa11□□□□□ -0.65
CDH13-204ENST00000539548 AK7Q96M32 723 aa11□□□□□ -0.65
CDH13-204ENST00000539548 GSDMAQ96QA5 445 aa11□□□□□ -0.65
CDH13-204ENST00000539548 SLC4A4Q9Y6R1 1079 aa11□□□□□ -0.65
CDH13-204ENST00000539548 TNKS1BP1Q9C0C2 1729 aaKnown RBP11□□□□□ -0.65
CDH13-204ENST00000539548 ERVV-1B6SEH8 477 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 BMP15O95972 392 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 CD44P16070 742 aaKnown RBP10.99□□□□□ -0.65
CDH13-204ENST00000539548 FECHP22830 423 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 HNRNPH2P55795 449 aaKnown RBP10.99□□□□□ -0.65
CDH13-204ENST00000539548 CMTR1Q8N1G2 835 aaKnown RBP10.99□□□□□ -0.65
CDH13-204ENST00000539548 LCORLQ8N3X6 602 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 CCDC82Q8N4S0 544 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 CEP112Q8N8E3 955 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 HNRNPLLQ8WVV9 542 aaKnown RBP10.99□□□□□ -0.65
CDH13-204ENST00000539548 FERMT2Q96AC1 680 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 TOMM22Q9NS69 142 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 CDC23Q9UJX2 597 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 ITGB4P16144 1822 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 A0A087X0B3 334 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 PPP1R3GB7ZBB8 358 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 POTEB2H3BUK9 544 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 MAP2K7O14733 419 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 KIF5CO60282 957 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 CYP19A1P11511 503 aaPredicted RBP10.99□□□□□ -0.65
CDH13-204ENST00000539548 XBP1P17861 261 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 ATP2B1P20020 1258 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 CHMP4BP1P59074 171 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 DPYDQ12882 1025 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 SEC23AQ15436 765 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 LONRF2Q1L5Z9 754 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 FILIP1LQ4L180 1135 aa10.99□□□□□ -0.65
CDH13-204ENST00000539548 IRX2Q9BZI1 471 aaPredicted RBP10.99□□□□□ -0.65
CDH13-204ENST00000539548 ITIH6Q6UXX5 1313 aa10.98□□□□□ -0.65
CDH13-204ENST00000539548 SYNRGQ9UMZ2 1314 aa10.98□□□□□ -0.65
CDH13-204ENST00000539548 RTL9Q8NET4 1388 aa10.98□□□□□ -0.65
CDH13-204ENST00000539548 MFAP3LO75121 409 aa10.98□□□□□ -0.65
CDH13-204ENST00000539548 AKAP17AQ02040 695 aaKnown RBP10.98□□□□□ -0.65
CDH13-204ENST00000539548 GPS2Q13227 327 aa10.98□□□□□ -0.65
CDH13-204ENST00000539548 CNGA4Q8IV77 575 aa10.98□□□□□ -0.65
CDH13-204ENST00000539548 ZNF34Q8IZ26 560 aa10.98□□□□□ -0.65
CDH13-204ENST00000539548 MSL3Q8N5Y2 521 aaKnown RBP10.98□□□□□ -0.65
CDH13-204ENST00000539548 NUP133Q8WUM0 1156 aa10.98□□□□□ -0.65
CDH13-204ENST00000539548 EPSTI1Q96J88 318 aa10.98□□□□□ -0.65
CDH13-204ENST00000539548 PHF20Q9BVI0 1012 aa10.98□□□□□ -0.65
CDH13-204ENST00000539548 ZCCHC17Q9NP64 241 aaKnown RBP10.98□□□□□ -0.65
CDH13-204ENST00000539548 LZTFL1Q9NQ48 299 aa10.98□□□□□ -0.65
CDH13-204ENST00000539548 ANAPC4Q9UJX5 808 aa10.98□□□□□ -0.65
CDH13-204ENST00000539548 LRRC10BA6NIK2 292 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 TULP2O00295 520 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 PRPF3O43395 683 aaKnown RBP10.97□□□□□ -0.65
CDH13-204ENST00000539548 KRT2P35908 639 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 AFMP43652 599 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 USP5P45974 858 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 PPARAQ07869 468 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 PKN1Q16512 942 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 MSANTD4Q8NCY6 345 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 SHISA4Q96DD7 197 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 UBAC1Q9BSL1 405 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 RAB21Q9UL25 225 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 TTF2Q9UNY4 1162 aaKnown RBP10.97□□□□□ -0.65
CDH13-204ENST00000539548 MYH8P13535 1937 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 MYH2Q9UKX2 1941 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 PLCH1Q4KWH8 1693 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 FAM205CA6NFA0 338 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 STX17P56962 302 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 ST5P78524 1137 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 FUT2Q10981 343 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 KLHL10Q6JEL2 608 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 BRINP3Q76B58 766 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 TMTC1Q8IUR5 882 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 CPLX3Q8WVH0 158 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 SYMPKQ92797 1274 aaKnown RBP10.97□□□□□ -0.65
CDH13-204ENST00000539548 PSD3Q9NYI0 1048 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 LIMA1Q9UHB6 759 aaKnown RBP10.97□□□□□ -0.65
CDH13-204ENST00000539548 BCL9LQ86UU0 1499 aa10.97□□□□□ -0.65
CDH13-204ENST00000539548 CASP14P31944 242 aa10.96□□□□□ -0.65
CDH13-204ENST00000539548 EVA1CP58658 441 aa10.96□□□□□ -0.65
CDH13-204ENST00000539548 MUM1L1Q5H9M0 696 aa10.96□□□□□ -0.65
CDH13-204ENST00000539548 ZNF569Q5MCW4 686 aa10.96□□□□□ -0.65
CDH13-204ENST00000539548 ESR2Q92731 530 aa10.96□□□□□ -0.65
CDH13-204ENST00000539548 EXOC4Q96A65 974 aa10.96□□□□□ -0.65
CDH13-204ENST00000539548 ANKZF1Q9H8Y5 726 aa10.96□□□□□ -0.65
CDH13-204ENST00000539548 A0A0U1RQJ8 604 aa10.96□□□□□ -0.66
CDH13-204ENST00000539548 CTAGE9A4FU28 777 aa10.96□□□□□ -0.66
CDH13-204ENST00000539548 GYPCP04921 128 aa10.96□□□□□ -0.66
CDH13-204ENST00000539548 KIF4BQ2VIQ3 1234 aa10.96□□□□□ -0.66
CDH13-204ENST00000539548 EARS2Q5JPH6 523 aaKnown RBP10.96□□□□□ -0.66
CDH13-204ENST00000539548 BEND6Q5SZJ8 279 aaPredicted RBP10.96□□□□□ -0.66
CDH13-204ENST00000539548 ATRIPQ8WXE1 791 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms