RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 C12orf42Q96LP6 360 aa22.96■■□□□ 1.27
TNFRSF1A-212ENST00000539372 KIAA1683Q9H0B3 1180 aa22.96■■□□□ 1.27
TNFRSF1A-212ENST00000539372 UNC93B1Q9H1C4 597 aa22.96■■□□□ 1.27
TNFRSF1A-212ENST00000539372 MYH7P12883 1935 aa22.96■■□□□ 1.27
TNFRSF1A-212ENST00000539372 INHAP05111 366 aa22.95■■□□□ 1.26
TNFRSF1A-212ENST00000539372 USP14P54578 494 aa22.95■■□□□ 1.26
TNFRSF1A-212ENST00000539372 KBTBD3Q8NAB2 608 aa22.95■■□□□ 1.26
TNFRSF1A-212ENST00000539372 GPRC5AQ8NFJ5 357 aa22.95■■□□□ 1.26
TNFRSF1A-212ENST00000539372 PXYLP1Q8TE99 480 aa22.95■■□□□ 1.26
TNFRSF1A-212ENST00000539372 SHISA4Q96DD7 197 aa22.95■■□□□ 1.26
TNFRSF1A-212ENST00000539372 PAGR1Q9BTK6 254 aa22.95■■□□□ 1.26
TNFRSF1A-212ENST00000539372 RBPJLQ9UBG7 517 aa22.95■■□□□ 1.26
TNFRSF1A-212ENST00000539372 SWAP70Q9UH65 585 aa22.95■■□□□ 1.26
TNFRSF1A-212ENST00000539372 USP17L12C9JPN9 530 aa22.94■■□□□ 1.26
TNFRSF1A-212ENST00000539372 USP17L21D6R901 530 aa22.94■■□□□ 1.26
TNFRSF1A-212ENST00000539372 VCAM1P19320 739 aa22.94■■□□□ 1.26
TNFRSF1A-212ENST00000539372 C12orf60Q5U649 245 aa22.94■■□□□ 1.26
TNFRSF1A-212ENST00000539372 POTEEQ6S8J3 1075 aa22.94■■□□□ 1.26
TNFRSF1A-212ENST00000539372 OTUD7AQ8TE49 926 aaPredicted RBP22.94■■□□□ 1.26
TNFRSF1A-212ENST00000539372 DDRGK1Q96HY6 314 aa22.94■■□□□ 1.26
TNFRSF1A-212ENST00000539372 DOCK3Q8IZD9 2030 aa22.94■■□□□ 1.26
TNFRSF1A-212ENST00000539372 BAZ2AQ9UIF9 1905 aaKnown RBP22.93■■□□□ 1.26
TNFRSF1A-212ENST00000539372 USP17L15C9J2P7 530 aa22.93■■□□□ 1.26
TNFRSF1A-212ENST00000539372 USP17L13C9JLJ4 530 aa22.93■■□□□ 1.26
TNFRSF1A-212ENST00000539372 USP17L11C9JVI0 530 aa22.93■■□□□ 1.26
TNFRSF1A-212ENST00000539372 USP17L18D6R9N7 530 aa22.93■■□□□ 1.26
TNFRSF1A-212ENST00000539372 USP17L22D6RA61 530 aa22.93■■□□□ 1.26
TNFRSF1A-212ENST00000539372 USP17L17D6RBQ6 530 aa22.93■■□□□ 1.26
TNFRSF1A-212ENST00000539372 USP17L19D6RCP7 530 aa22.93■■□□□ 1.26
TNFRSF1A-212ENST00000539372 USP17L20D6RJB6 530 aa22.93■■□□□ 1.26
TNFRSF1A-212ENST00000539372 USP17L24Q0WX57 530 aa22.93■■□□□ 1.26
TNFRSF1A-212ENST00000539372 Q3C1V9 767 aa22.93■■□□□ 1.26
TNFRSF1A-212ENST00000539372 AMOTL1Q8IY63 956 aa22.93■■□□□ 1.26
TNFRSF1A-212ENST00000539372 GJD2Q9UKL4 321 aa22.93■■□□□ 1.26
TNFRSF1A-212ENST00000539372 A0A1W2PRG0 241 aa22.92■■□□□ 1.26
TNFRSF1A-212ENST00000539372 GJB1P08034 283 aa22.92■■□□□ 1.26
TNFRSF1A-212ENST00000539372 AKR1B1P15121 316 aa22.92■■□□□ 1.26
TNFRSF1A-212ENST00000539372 CDK8P49336 464 aa22.92■■□□□ 1.26
TNFRSF1A-212ENST00000539372 ERVK-9P63128 1117 aa22.92■■□□□ 1.26
TNFRSF1A-212ENST00000539372 ERVK-24P63145 666 aa22.92■■□□□ 1.26
TNFRSF1A-212ENST00000539372 CATSPERGQ6ZRH7 1159 aa22.92■■□□□ 1.26
TNFRSF1A-212ENST00000539372 CLEC10AQ8IUN9 316 aa22.92■■□□□ 1.26
TNFRSF1A-212ENST00000539372 RNF113AO15541 343 aaKnown RBP22.91■■□□□ 1.26
TNFRSF1A-212ENST00000539372 GJA8P48165 433 aa22.91■■□□□ 1.26
TNFRSF1A-212ENST00000539372 CTR9Q6PD62 1173 aa22.91■■□□□ 1.26
TNFRSF1A-212ENST00000539372 TMEM179Q6ZVK1 233 aa22.91■■□□□ 1.26
TNFRSF1A-212ENST00000539372 NKX2-3Q8TAU0 364 aa22.91■■□□□ 1.26
TNFRSF1A-212ENST00000539372 GTF3C2Q8WUA4 911 aaPredicted RBP22.91■■□□□ 1.26
TNFRSF1A-212ENST00000539372 OSBP2Q969R2 916 aa22.91■■□□□ 1.26
TNFRSF1A-212ENST00000539372 STRBPQ96SI9 672 aaKnown RBP22.91■■□□□ 1.26
TNFRSF1A-212ENST00000539372 RPAP3Q9H6T3 665 aaPredicted RBP22.91■■□□□ 1.26
TNFRSF1A-212ENST00000539372 TTC41PQ6P2S7 1318 aa22.9■■□□□ 1.26
TNFRSF1A-212ENST00000539372 CCAR1Q8IX12 1150 aaKnown RBP22.9■■□□□ 1.26
TNFRSF1A-212ENST00000539372 U2AF1L4Q8WU68 220 aaKnown RBP22.9■■□□□ 1.26
TNFRSF1A-212ENST00000539372 APPBP2Q92624 585 aa22.9■■□□□ 1.26
TNFRSF1A-212ENST00000539372 PORCNQ9H237 461 aa22.9■■□□□ 1.26
TNFRSF1A-212ENST00000539372 CNMDO75829 334 aa22.89■■□□□ 1.25
TNFRSF1A-212ENST00000539372 CYP2B6P20813 491 aa22.89■■□□□ 1.25
TNFRSF1A-212ENST00000539372 MAPK4P31152 587 aa22.89■■□□□ 1.25
TNFRSF1A-212ENST00000539372 C16orf86Q6ZW13 317 aa22.89■■□□□ 1.25
TNFRSF1A-212ENST00000539372 PI4K2BQ8TCG2 481 aa22.89■■□□□ 1.25
TNFRSF1A-212ENST00000539372 GSG1L2A8MUP6 293 aa22.88■■□□□ 1.25
TNFRSF1A-212ENST00000539372 ERC2O15083 957 aa22.88■■□□□ 1.25
TNFRSF1A-212ENST00000539372 ICA1Q05084 483 aa22.88■■□□□ 1.25
TNFRSF1A-212ENST00000539372 TRIM32Q13049 653 aa22.88■■□□□ 1.25
TNFRSF1A-212ENST00000539372 KIAA1755Q5JYT7 1200 aa22.88■■□□□ 1.25
TNFRSF1A-212ENST00000539372 NUDT12Q9BQG2 462 aa22.88■■□□□ 1.25
TNFRSF1A-212ENST00000539372 RABGAP1Q9Y3P9 1069 aa22.88■■□□□ 1.25
TNFRSF1A-212ENST00000539372 M0R2C6 588 aa22.87■■□□□ 1.25
TNFRSF1A-212ENST00000539372 GLRX3O76003 335 aaKnown RBP22.87■■□□□ 1.25
TNFRSF1A-212ENST00000539372 HMGCRP04035 888 aa22.87■■□□□ 1.25
TNFRSF1A-212ENST00000539372 ZFYP08048 801 aaPredicted RBP22.87■■□□□ 1.25
TNFRSF1A-212ENST00000539372 MX1P20591 662 aa22.87■■□□□ 1.25
TNFRSF1A-212ENST00000539372 ANKRD45Q5TZF3 282 aa22.87■■□□□ 1.25
TNFRSF1A-212ENST00000539372 GPR142Q7Z601 462 aa22.87■■□□□ 1.25
TNFRSF1A-212ENST00000539372 SIAH1Q8IUQ4 282 aa22.87■■□□□ 1.25
TNFRSF1A-212ENST00000539372 STK11IPQ8N1F8 1099 aa22.87■■□□□ 1.25
TNFRSF1A-212ENST00000539372 CCDC17Q96LX7 622 aa22.87■■□□□ 1.25
TNFRSF1A-212ENST00000539372 DEFB118Q96PH6 123 aa22.87■■□□□ 1.25
TNFRSF1A-212ENST00000539372 CWC22Q9HCG8 908 aaKnown RBP22.87■■□□□ 1.25
TNFRSF1A-212ENST00000539372 ARPP21Q9UBL0 812 aaPredicted RBP22.87■■□□□ 1.25
TNFRSF1A-212ENST00000539372 PLXNB2O15031 1838 aa22.87■■□□□ 1.25
TNFRSF1A-212ENST00000539372 SPDYE16A6NNV3 312 aaPredicted RBP22.86■■□□□ 1.25
TNFRSF1A-212ENST00000539372 GPAA1O43292 621 aa22.86■■□□□ 1.25
TNFRSF1A-212ENST00000539372 SGPL1O95470 568 aa22.86■■□□□ 1.25
TNFRSF1A-212ENST00000539372 PLEKHH3Q7Z736 793 aa22.86■■□□□ 1.25
TNFRSF1A-212ENST00000539372 SOCS4Q8WXH5 440 aa22.86■■□□□ 1.25
TNFRSF1A-212ENST00000539372 TRIB2Q92519 343 aa22.86■■□□□ 1.25
TNFRSF1A-212ENST00000539372 TANGO6Q9C0B7 1094 aa22.86■■□□□ 1.25
TNFRSF1A-212ENST00000539372 ARHGEF10LQ9HCE6 1279 aa22.86■■□□□ 1.25
TNFRSF1A-212ENST00000539372 BTBD7Q9P203 1132 aa22.86■■□□□ 1.25
TNFRSF1A-212ENST00000539372 ZBTB47Q9UFB7 747 aaPredicted RBP22.86■■□□□ 1.25
TNFRSF1A-212ENST00000539372 MYH8P13535 1937 aa22.86■■□□□ 1.25
TNFRSF1A-212ENST00000539372 MINDY4BA8MYZ0 360 aa22.85■■□□□ 1.25
TNFRSF1A-212ENST00000539372 ATP2B2Q01814 1243 aa22.85■■□□□ 1.25
TNFRSF1A-212ENST00000539372 WDR78Q5VTH9 848 aa22.85■■□□□ 1.25
TNFRSF1A-212ENST00000539372 SPICE1Q8N0Z3 855 aa22.85■■□□□ 1.25
TNFRSF1A-212ENST00000539372 FSD1Q9BTV5 496 aa22.85■■□□□ 1.25
TNFRSF1A-212ENST00000539372 PAK6Q9NQU5 681 aaPredicted RBP22.85■■□□□ 1.25
TNFRSF1A-212ENST00000539372 TFRCP02786 760 aaKnown RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms