RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 GUCY1A2P33402 732 aa26.76■■□□□ 1.87
SCARB1-206ENST00000539320 RRP1P56182 461 aaKnown RBP26.76■■□□□ 1.87
SCARB1-206ENST00000539320 SEPT2Q15019 361 aa26.76■■□□□ 1.87
SCARB1-206ENST00000539320 SLC44A5Q8NCS7 719 aa26.76■■□□□ 1.87
SCARB1-206ENST00000539320 GPRC5AQ8NFJ5 357 aa26.76■■□□□ 1.87
SCARB1-206ENST00000539320 USP17L15C9J2P7 530 aa26.75■■□□□ 1.87
SCARB1-206ENST00000539320 USP17L13C9JLJ4 530 aa26.75■■□□□ 1.87
SCARB1-206ENST00000539320 USP17L11C9JVI0 530 aa26.75■■□□□ 1.87
SCARB1-206ENST00000539320 USP17L18D6R9N7 530 aa26.75■■□□□ 1.87
SCARB1-206ENST00000539320 USP17L22D6RA61 530 aa26.75■■□□□ 1.87
SCARB1-206ENST00000539320 USP17L17D6RBQ6 530 aa26.75■■□□□ 1.87
SCARB1-206ENST00000539320 USP17L19D6RCP7 530 aa26.75■■□□□ 1.87
SCARB1-206ENST00000539320 USP17L20D6RJB6 530 aa26.75■■□□□ 1.87
SCARB1-206ENST00000539320 MPHOSPH10O00566 681 aaKnown RBP26.75■■□□□ 1.87
SCARB1-206ENST00000539320 PEX10O60683 326 aa26.75■■□□□ 1.87
SCARB1-206ENST00000539320 VCAM1P19320 739 aa26.75■■□□□ 1.87
SCARB1-206ENST00000539320 USP17L24Q0WX57 530 aa26.75■■□□□ 1.87
SCARB1-206ENST00000539320 PAGR1Q9BTK6 254 aa26.75■■□□□ 1.87
SCARB1-206ENST00000539320 MYH8P13535 1937 aa26.75■■□□□ 1.87
SCARB1-206ENST00000539320 SLC34A2O95436 690 aa26.74■■□□□ 1.87
SCARB1-206ENST00000539320 ERVK-9P63128 1117 aa26.74■■□□□ 1.87
SCARB1-206ENST00000539320 ERVK-24P63145 666 aa26.74■■□□□ 1.87
SCARB1-206ENST00000539320 AMOTL1Q8IY63 956 aa26.74■■□□□ 1.87
SCARB1-206ENST00000539320 U2AF1L4Q8WU68 220 aaKnown RBP26.74■■□□□ 1.87
SCARB1-206ENST00000539320 DDRGK1Q96HY6 314 aa26.74■■□□□ 1.87
SCARB1-206ENST00000539320 RBPJLQ9UBG7 517 aa26.74■■□□□ 1.87
SCARB1-206ENST00000539320 GJD2Q9UKL4 321 aa26.74■■□□□ 1.87
SCARB1-206ENST00000539320 PCDHB15Q9Y5E8 787 aa26.74■■□□□ 1.87
SCARB1-206ENST00000539320 CEP290O15078 2479 aa26.73■■□□□ 1.87
SCARB1-206ENST00000539320 TSHZ3Q63HK5 1081 aa26.73■■□□□ 1.87
SCARB1-206ENST00000539320 DYNLL2Q96FJ2 89 aa26.73■■□□□ 1.87
SCARB1-206ENST00000539320 PLXNB2O15031 1838 aa26.73■■□□□ 1.87
SCARB1-206ENST00000539320 HMGCRP04035 888 aa26.72■■□□□ 1.87
SCARB1-206ENST00000539320 MAPK4P31152 587 aa26.72■■□□□ 1.87
SCARB1-206ENST00000539320 TMEM179Q6ZVK1 233 aa26.72■■□□□ 1.87
SCARB1-206ENST00000539320 KBTBD3Q8NAB2 608 aa26.72■■□□□ 1.87
SCARB1-206ENST00000539320 SOCS4Q8WXH5 440 aa26.72■■□□□ 1.87
SCARB1-206ENST00000539320 PUS7LQ9H0K6 701 aaKnown RBP26.72■■□□□ 1.87
SCARB1-206ENST00000539320 SLC4A4Q9Y6R1 1079 aa26.72■■□□□ 1.87
SCARB1-206ENST00000539320 C12orf60Q5U649 245 aa26.71■■□□□ 1.87
SCARB1-206ENST00000539320 CATSPERGQ6ZRH7 1159 aa26.71■■□□□ 1.87
SCARB1-206ENST00000539320 CYP2D7A0A087X1C5 515 aa26.7■■□□□ 1.86
SCARB1-206ENST00000539320 POTEEQ6S8J3 1075 aa26.7■■□□□ 1.86
SCARB1-206ENST00000539320 CCAR1Q8IX12 1150 aaKnown RBP26.7■■□□□ 1.86
SCARB1-206ENST00000539320 GCC1Q96CN9 775 aa26.7■■□□□ 1.86
SCARB1-206ENST00000539320 NUDT12Q9BQG2 462 aa26.7■■□□□ 1.86
SCARB1-206ENST00000539320 PORCNQ9H237 461 aa26.7■■□□□ 1.86
SCARB1-206ENST00000539320 RPAP3Q9H6T3 665 aaPredicted RBP26.7■■□□□ 1.86
SCARB1-206ENST00000539320 PAK6Q9NQU5 681 aaPredicted RBP26.7■■□□□ 1.86
SCARB1-206ENST00000539320 RABGAP1Q9Y3P9 1069 aa26.7■■□□□ 1.86
SCARB1-206ENST00000539320 USP17L12C9JPN9 530 aa26.69■■□□□ 1.86
SCARB1-206ENST00000539320 USP17L21D6R901 530 aa26.69■■□□□ 1.86
SCARB1-206ENST00000539320 FARP2O94887 1054 aaPredicted RBP26.69■■□□□ 1.86
SCARB1-206ENST00000539320 SGPL1O95470 568 aa26.69■■□□□ 1.86
SCARB1-206ENST00000539320 AKR1B1P15121 316 aa26.69■■□□□ 1.86
SCARB1-206ENST00000539320 Q3C1V9 767 aa26.69■■□□□ 1.86
SCARB1-206ENST00000539320 UBE2Q1Q7Z7E8 422 aa26.69■■□□□ 1.86
SCARB1-206ENST00000539320 DEFB118Q96PH6 123 aa26.69■■□□□ 1.86
SCARB1-206ENST00000539320 A0A1W2PRG0 241 aa26.68■■□□□ 1.86
SCARB1-206ENST00000539320 SMIM22K7EJ46 135 aa26.68■■□□□ 1.86
SCARB1-206ENST00000539320 CNMDO75829 334 aa26.68■■□□□ 1.86
SCARB1-206ENST00000539320 CYP2B6P20813 491 aa26.68■■□□□ 1.86
SCARB1-206ENST00000539320 LBX2Q6XYB7 198 aa26.68■■□□□ 1.86
SCARB1-206ENST00000539320 C16orf86Q6ZW13 317 aa26.68■■□□□ 1.86
SCARB1-206ENST00000539320 APPBP2Q92624 585 aa26.68■■□□□ 1.86
SCARB1-206ENST00000539320 CCDC17Q96LX7 622 aa26.68■■□□□ 1.86
SCARB1-206ENST00000539320 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.68■■□□□ 1.862e-9■■■□□ 15.3
SCARB1-206ENST00000539320 CDK8P49336 464 aa26.67■■□□□ 1.86
SCARB1-206ENST00000539320 CCNA1P78396 465 aa26.67■■□□□ 1.86
SCARB1-206ENST00000539320 ICA1Q05084 483 aa26.67■■□□□ 1.86
SCARB1-206ENST00000539320 GPR142Q7Z601 462 aa26.67■■□□□ 1.86
SCARB1-206ENST00000539320 CLEC10AQ8IUN9 316 aa26.67■■□□□ 1.86
SCARB1-206ENST00000539320 TRIB2Q92519 343 aa26.67■■□□□ 1.86
SCARB1-206ENST00000539320 CWC22Q9HCG8 908 aaKnown RBP26.67■■□□□ 1.86
SCARB1-206ENST00000539320 ARPP21Q9UBL0 812 aaPredicted RBP26.67■■□□□ 1.86
SCARB1-206ENST00000539320 TTC41PQ6P2S7 1318 aa26.66■■□□□ 1.86
SCARB1-206ENST00000539320 SPDYE16A6NNV3 312 aaPredicted RBP26.66■■□□□ 1.86
SCARB1-206ENST00000539320 ZFYP08048 801 aaPredicted RBP26.66■■□□□ 1.86
SCARB1-206ENST00000539320 CAPN2P17655 700 aa26.66■■□□□ 1.86
SCARB1-206ENST00000539320 PLEKHH3Q7Z736 793 aa26.66■■□□□ 1.86
SCARB1-206ENST00000539320 STRBPQ96SI9 672 aaKnown RBP26.66■■□□□ 1.86
SCARB1-206ENST00000539320 ARHGEF10LQ9HCE6 1279 aa26.66■■□□□ 1.86
SCARB1-206ENST00000539320 ERC2O15083 957 aa26.65■■□□□ 1.86
SCARB1-206ENST00000539320 RNF113AO15541 343 aaKnown RBP26.65■■□□□ 1.86
SCARB1-206ENST00000539320 XRCC5P13010 732 aaKnown RBP26.65■■□□□ 1.86
SCARB1-206ENST00000539320 TRIM32Q13049 653 aa26.65■■□□□ 1.86
SCARB1-206ENST00000539320 CTR9Q6PD62 1173 aa26.65■■□□□ 1.86
SCARB1-206ENST00000539320 OSBP2Q969R2 916 aa26.65■■□□□ 1.86
SCARB1-206ENST00000539320 CRBNQ96SW2 442 aa26.65■■□□□ 1.86
SCARB1-206ENST00000539320 SH2D4AQ9H788 454 aa26.65■■□□□ 1.86
SCARB1-206ENST00000539320 RGS2P41220 211 aa26.64■■□□□ 1.86
SCARB1-206ENST00000539320 MORN1Q5T089 497 aa26.64■■□□□ 1.86
SCARB1-206ENST00000539320 USP6NLQ92738 828 aa26.64■■□□□ 1.86
SCARB1-206ENST00000539320 APBA2Q99767 749 aa26.64■■□□□ 1.86
SCARB1-206ENST00000539320 HTATIP2Q9BUP3 242 aa26.64■■□□□ 1.86
SCARB1-206ENST00000539320 TANGO6Q9C0B7 1094 aa26.64■■□□□ 1.86
SCARB1-206ENST00000539320 CRISPLD2Q9H0B8 497 aa26.64■■□□□ 1.86
SCARB1-206ENST00000539320 RPTORQ8N122 1335 aa26.64■■□□□ 1.85
SCARB1-206ENST00000539320 TFRCP02786 760 aaKnown RBP26.63■■□□□ 1.85
SCARB1-206ENST00000539320 ZKSCAN1P17029 563 aaPredicted RBP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms