RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 SRFP11831 508 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 RPL17P18621 184 aaKnown RBP1.53□□□□□ -2.16
HIF1A-204ENST00000539097 EIF2AK2P19525 551 aaKnown RBP1.53□□□□□ -2.16
HIF1A-204ENST00000539097 CORO7P57737 925 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 APOBRQ0VD83 1088 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 SDE2Q6IQ49 451 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 LRFN4Q6PJG9 635 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 SH3TC2Q8TF17 1288 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 KLHL6Q8WZ60 621 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 PLPPR2Q96GM1 343 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 GPR62Q9BZJ7 368 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 CCDC86Q9H6F5 360 aaKnown RBP1.53□□□□□ -2.16
HIF1A-204ENST00000539097 THRAP3Q9Y2W1 955 aaKnown RBP1.53□□□□□ -2.16
HIF1A-204ENST00000539097 NUB1Q9Y5A7 615 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 FAM229AH3BQW9 127 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 BCRP11274 1271 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 DRD2P14416 443 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 CYP7A1P22680 504 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 WASP42768 502 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 AFF1P51825 1210 aaKnown RBP1.53□□□□□ -2.16
HIF1A-204ENST00000539097 CABP4P57796 275 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 ARHGAP44Q17R89 818 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 SLC7A3Q8WY07 619 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 VWCEQ96DN2 955 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 KLHDC7BQ96G42 594 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 CEP41Q9BYV8 373 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 NGRNQ9NPE2 291 aaKnown RBP1.53□□□□□ -2.16
HIF1A-204ENST00000539097 APEX2Q9UBZ4 518 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 PGAP2Q9UHJ9 254 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 CD2APQ9Y5K6 639 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 ARNTLO00327 626 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 PPM1GO15355 546 aaPredicted RBP1.53□□□□□ -2.17
HIF1A-204ENST00000539097 CBFA2T2O43439 604 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 CST3P01034 146 aaPredicted RBP1.53□□□□□ -2.17
HIF1A-204ENST00000539097 CDKN1CP49918 316 aaPredicted RBP1.53□□□□□ -2.17
HIF1A-204ENST00000539097 SNRPNP63162 240 aaKnown RBP1.53□□□□□ -2.17
HIF1A-204ENST00000539097 MAP4K2Q12851 820 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 SETDB1Q15047 1291 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 CWF19L2Q2TBE0 894 aaKnown RBP1.53□□□□□ -2.17
HIF1A-204ENST00000539097 PKDCCQ504Y2 493 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 C2orf27AQ580R0 203 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 PSAPL1Q6NUJ1 521 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 SHISA2Q6UWI4 295 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 MAMDC2Q7Z304 686 aaPredicted RBP1.53□□□□□ -2.17
HIF1A-204ENST00000539097 HDXQ7Z353 690 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 C12orf40Q86WS4 652 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 Q8N1Y9 231 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 UBR7Q8N806 425 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 RIN3Q8TB24 985 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 GPBAR1Q8TDU6 330 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 CLUHP3Q96NS8 147 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 SLC9A7Q96T83 725 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 WNT10AQ9GZT5 417 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 MRPL18Q9H0U6 180 aaKnown RBP1.53□□□□□ -2.17
HIF1A-204ENST00000539097 CWC22Q9HCG8 908 aaKnown RBP1.53□□□□□ -2.17
HIF1A-204ENST00000539097 GMIPQ9P107 970 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 GGA1Q9UJY5 639 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 SLC6A14Q9UN76 642 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 MAPK8IP1Q9UQF2 711 aa1.53□□□□□ -2.17
HIF1A-204ENST00000539097 DCDC2CA8MYV0 355 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 LINC01387J3KSC0 135 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 CPP00450 1065 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 H2AFB1P0C5Y9 115 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 H2AFB2P0C5Z0 115 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 SLFN14P0C7P3 912 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 NLRP12P59046 1061 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 SKOR2Q2VWA4 1001 aaPredicted RBP1.52□□□□□ -2.17
HIF1A-204ENST00000539097 CCDC178Q5BJE1 867 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 SLFN12Q8IYM2 578 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 ZNF513Q8N8E2 541 aaPredicted RBP1.52□□□□□ -2.17
HIF1A-204ENST00000539097 PUM2Q8TB72 1066 aaKnown RBP eCLIP1.52□□□□□ -2.17
HIF1A-204ENST00000539097 RNF141Q8WVD5 230 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 KCNB2Q92953 911 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 ACDQ96AP0 544 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 DEPDC7Q96QD5 511 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 SRPK1Q96SB4 655 aaKnown RBP1.52□□□□□ -2.17
HIF1A-204ENST00000539097 TMPRSS13Q9BYE2 586 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 KRTAP9-3Q9BYQ3 159 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 FANCLQ9NW38 375 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 GPN3Q9UHW5 284 aaPredicted RBP1.52□□□□□ -2.17
HIF1A-204ENST00000539097 PCDHB14Q9Y5E9 798 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 GJA3Q9Y6H8 435 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 RGS13O14921 159 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 MAFGO15525 162 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 PARNO95453 639 aaKnown RBP1.52□□□□□ -2.17
HIF1A-204ENST00000539097 GHRHP01286 108 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 ITGB2P05107 769 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 NEFMP07197 916 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 PDE6BP35913 854 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 ADH7P40394 386 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 ETV3P41162 512 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 YARSP54577 528 aaKnown RBP1.52□□□□□ -2.17
HIF1A-204ENST00000539097 C19orf57Q0VDD7 668 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 SNW1Q13573 536 aaKnown RBP1.52□□□□□ -2.17
HIF1A-204ENST00000539097 DDR2Q16832 855 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 TDRD10Q5VZ19 366 aaKnown RBP1.52□□□□□ -2.17
HIF1A-204ENST00000539097 SULF2Q8IWU5 870 aa1.52□□□□□ -2.17
HIF1A-204ENST00000539097 BHLHE22Q8NFJ8 381 aaPredicted RBP1.52□□□□□ -2.17
HIF1A-204ENST00000539097 SYTL5Q8TDW5 730 aaPredicted RBP1.52□□□□□ -2.17
HIF1A-204ENST00000539097 ZNF512BQ96KM6 892 aaPredicted RBP1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms