RNA–Protein interactions for RNA: ENST00000539010.5

PDE4C-204, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-204ENST00000539010 TOB2Q14106 344 aaPredicted RBP16.62■□□□□ 0.25
PDE4C-204ENST00000539010 RRP1BQ14684 758 aaKnown RBP16.62■□□□□ 0.25
PDE4C-204ENST00000539010 SEC23AQ15436 765 aa16.62■□□□□ 0.25
PDE4C-204ENST00000539010 MAP3K11Q16584 847 aa16.62■□□□□ 0.25
PDE4C-204ENST00000539010 SYNE3Q6ZMZ3 975 aa16.62■□□□□ 0.25
PDE4C-204ENST00000539010 SGMS1Q86VZ5 419 aa16.62■□□□□ 0.25
PDE4C-204ENST00000539010 HSCBQ8IWL3 235 aa16.62■□□□□ 0.25
PDE4C-204ENST00000539010 SCYL3Q8IZE3 742 aa16.62■□□□□ 0.25
PDE4C-204ENST00000539010 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.62■□□□□ 0.25
PDE4C-204ENST00000539010 ANKS1AQ92625 1134 aa16.62■□□□□ 0.25
PDE4C-204ENST00000539010 ZNF408Q9H9D4 720 aa16.62■□□□□ 0.25
PDE4C-204ENST00000539010 LY9Q9HBG7 655 aa16.62■□□□□ 0.25
PDE4C-204ENST00000539010 PICK1Q9NRD5 415 aa16.62■□□□□ 0.25
PDE4C-204ENST00000539010 MTMR4Q9NYA4 1195 aa16.62■□□□□ 0.25
PDE4C-204ENST00000539010 CSADQ9Y600 493 aa16.62■□□□□ 0.25
PDE4C-204ENST00000539010 TOMM70O94826 608 aa16.62■□□□□ 0.25
PDE4C-204ENST00000539010 ITGBL1O95965 494 aaPredicted RBP16.62■□□□□ 0.25
PDE4C-204ENST00000539010 ICA1Q05084 483 aa16.62■□□□□ 0.25
PDE4C-204ENST00000539010 BECN1Q14457 450 aa16.62■□□□□ 0.25
PDE4C-204ENST00000539010 SEPT2Q15019 361 aa16.62■□□□□ 0.25
PDE4C-204ENST00000539010 NOL9Q5SY16 702 aaKnown RBP16.62■□□□□ 0.25
PDE4C-204ENST00000539010 ZNF784Q8NCA9 323 aaPredicted RBP16.62■□□□□ 0.25
PDE4C-204ENST00000539010 RBM46Q8TBY0 533 aaKnown RBP16.62■□□□□ 0.25
PDE4C-204ENST00000539010 LIMCH1Q9UPQ0 1083 aa16.62■□□□□ 0.25
PDE4C-204ENST00000539010 DOCK1Q14185 1865 aa16.62■□□□□ 0.25
PDE4C-204ENST00000539010 TRPM7Q96QT4 1865 aa16.62■□□□□ 0.25
PDE4C-204ENST00000539010 UNCXA6NJT0 531 aa16.61■□□□□ 0.25
PDE4C-204ENST00000539010 INPP5BP32019 993 aa16.61■□□□□ 0.25
PDE4C-204ENST00000539010 NOVP48745 357 aa16.61■□□□□ 0.25
PDE4C-204ENST00000539010 ANKRD13AQ8IZ07 590 aa16.61■□□□□ 0.25
PDE4C-204ENST00000539010 C2orf69Q8N8R5 385 aa16.61■□□□□ 0.25
PDE4C-204ENST00000539010 ZSCAN31Q96LW9 406 aaPredicted RBP16.61■□□□□ 0.25
PDE4C-204ENST00000539010 KAT14Q9H8E8 782 aa16.61■□□□□ 0.25
PDE4C-204ENST00000539010 ARHGEF10LQ9HCE6 1279 aa16.61■□□□□ 0.25
PDE4C-204ENST00000539010 NYAP2Q9P242 653 aa16.61■□□□□ 0.25
PDE4C-204ENST00000539010 MYH4Q9Y623 1939 aa16.6■□□□□ 0.25
PDE4C-204ENST00000539010 CELF2O95319 508 aaKnown RBP16.6■□□□□ 0.25
PDE4C-204ENST00000539010 TOP1P11387 765 aaKnown RBP16.6■□□□□ 0.25
PDE4C-204ENST00000539010 GUCY1A2P33402 732 aa16.6■□□□□ 0.25
PDE4C-204ENST00000539010 EVCP57679 992 aa16.6■□□□□ 0.25
PDE4C-204ENST00000539010 CATIPQ7Z7H3 387 aa16.6■□□□□ 0.25
PDE4C-204ENST00000539010 ZKSCAN4Q969J2 545 aaPredicted RBP16.6■□□□□ 0.25
PDE4C-204ENST00000539010 TBC1D2Q9BYX2 928 aa16.6■□□□□ 0.25
PDE4C-204ENST00000539010 SH2D4AQ9H788 454 aa16.6■□□□□ 0.25
PDE4C-204ENST00000539010 GBA2Q9HCG7 927 aaPredicted RBP16.6■□□□□ 0.25
PDE4C-204ENST00000539010 GPHNQ9NQX3 736 aaPredicted RBP16.6■□□□□ 0.25
PDE4C-204ENST00000539010 FZD1Q9UP38 647 aa16.6■□□□□ 0.25
PDE4C-204ENST00000539010 SLC12A7Q9Y666 1083 aa16.6■□□□□ 0.25
PDE4C-204ENST00000539010 PAPPA2Q9BXP8 1791 aa16.6■□□□□ 0.25
PDE4C-204ENST00000539010 USP17L5A8MUK1 530 aa16.59■□□□□ 0.25
PDE4C-204ENST00000539010 ATP2B2Q01814 1243 aa16.59■□□□□ 0.25
PDE4C-204ENST00000539010 APOBRQ0VD83 1088 aa16.59■□□□□ 0.25
PDE4C-204ENST00000539010 RCSD1Q6JBY9 416 aa16.59■□□□□ 0.25
PDE4C-204ENST00000539010 NOL8Q76FK4 1167 aaKnown RBP16.59■□□□□ 0.25
PDE4C-204ENST00000539010 ZNF274Q96GC6 653 aaPredicted RBP16.59■□□□□ 0.25
PDE4C-204ENST00000539010 TMEM47Q9BQJ4 181 aa16.59■□□□□ 0.25
PDE4C-204ENST00000539010 AS3MTQ9HBK9 375 aa16.59■□□□□ 0.25
PDE4C-204ENST00000539010 SH2B1Q9NRF2 756 aaPredicted RBP16.59■□□□□ 0.25
PDE4C-204ENST00000539010 CLIP2Q9UDT6 1046 aa16.59■□□□□ 0.25
PDE4C-204ENST00000539010 NAP1L2Q9ULW6 460 aaPredicted RBP16.59■□□□□ 0.25
PDE4C-204ENST00000539010 SYNPO2Q9UMS6 1093 aa16.59■□□□□ 0.25
PDE4C-204ENST00000539010 KLF18A0A0U1RQI7 1052 aa16.59■□□□□ 0.25
PDE4C-204ENST00000539010 CALM1P0DP23 149 aa16.59■□□□□ 0.25
PDE4C-204ENST00000539010 CALM2P0DP24 149 aa16.59■□□□□ 0.25
PDE4C-204ENST00000539010 CALM3P0DP25 149 aa16.59■□□□□ 0.25
PDE4C-204ENST00000539010 EEF2P13639 858 aaKnown RBP16.59■□□□□ 0.25
PDE4C-204ENST00000539010 JAG1P78504 1218 aa16.59■□□□□ 0.25
PDE4C-204ENST00000539010 SHROOM1Q2M3G4 852 aaPredicted RBP16.59■□□□□ 0.25
PDE4C-204ENST00000539010 MKL1Q969V6 931 aa16.59■□□□□ 0.25
PDE4C-204ENST00000539010 CHMP4CQ96CF2 233 aa16.59■□□□□ 0.25
PDE4C-204ENST00000539010 ZBTB43O43298 467 aa16.58■□□□□ 0.24
PDE4C-204ENST00000539010 DDAH1O94760 285 aa16.58■□□□□ 0.24
PDE4C-204ENST00000539010 CD2BP2O95400 341 aaKnown RBP16.58■□□□□ 0.24
PDE4C-204ENST00000539010 RCAN1P53805 252 aa16.58■□□□□ 0.24
PDE4C-204ENST00000539010 VGLL4Q14135 290 aa16.58■□□□□ 0.24
PDE4C-204ENST00000539010 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.58■□□□□ 0.24
PDE4C-204ENST00000539010 ZNF654Q8IZM8 581 aa16.58■□□□□ 0.24
PDE4C-204ENST00000539010 PNMA1Q8ND90 353 aa16.58■□□□□ 0.24
PDE4C-204ENST00000539010 TPCN1Q9ULQ1 816 aa16.58■□□□□ 0.24
PDE4C-204ENST00000539010 K7ELQ4 463 aaPredicted RBP16.57■□□□□ 0.24
PDE4C-204ENST00000539010 PTPRAP18433 802 aa16.57■□□□□ 0.24
PDE4C-204ENST00000539010 FMR1Q06787 632 aaKnown RBP eCLIP16.57■□□□□ 0.24
PDE4C-204ENST00000539010 FSTL1Q12841 308 aa16.57■□□□□ 0.24
PDE4C-204ENST00000539010 APOA5Q6Q788 366 aa16.57■□□□□ 0.24
PDE4C-204ENST00000539010 LARP6Q9BRS8 491 aaKnown RBP16.57■□□□□ 0.24
PDE4C-204ENST00000539010 SLKQ9H2G2 1235 aaPredicted RBP16.57■□□□□ 0.24
PDE4C-204ENST00000539010 SENP2Q9HC62 589 aa16.57■□□□□ 0.24
PDE4C-204ENST00000539010 OTOFQ9HC10 1997 aa16.57■□□□□ 0.24
PDE4C-204ENST00000539010 GOLGA8BA8MQT2 603 aa16.56■□□□□ 0.24
PDE4C-204ENST00000539010 PPP2R5BQ15173 497 aa16.56■□□□□ 0.24
PDE4C-204ENST00000539010 LDLRAD1Q5T700 205 aa16.56■□□□□ 0.24
PDE4C-204ENST00000539010 CLEC10AQ8IUN9 316 aa16.56■□□□□ 0.24
PDE4C-204ENST00000539010 WDR18Q9BV38 432 aa16.56■□□□□ 0.24
PDE4C-204ENST00000539010 BRPF3Q9ULD4 1205 aa16.56■□□□□ 0.24
PDE4C-204ENST00000539010 SNCAIPQ9Y6H5 919 aa16.56■□□□□ 0.24
PDE4C-204ENST00000539010 PASKQ96RG2 1323 aa16.56■□□□□ 0.24
PDE4C-204ENST00000539010 UBE2Q2LH0YL09 131 aa16.56■□□□□ 0.24
PDE4C-204ENST00000539010 PDIA3P30101 505 aaKnown RBP16.56■□□□□ 0.24
PDE4C-204ENST00000539010 MOB2Q70IA6 237 aa16.56■□□□□ 0.24
PDE4C-204ENST00000539010 MICU3Q86XE3 530 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms