RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 FOXP4Q8IVH2 680 aaPredicted RBP16.6■□□□□ 0.25
CD4-208ENST00000538827 TMX3Q96JJ7 454 aa16.6■□□□□ 0.25
CD4-208ENST00000538827 ZSCAN10Q96SZ4 725 aaPredicted RBP16.6■□□□□ 0.25
CD4-208ENST00000538827 DEFB129Q9H1M3 183 aa16.6■□□□□ 0.25
CD4-208ENST00000538827 FOXD4L1Q9NU39 408 aa16.6■□□□□ 0.25
CD4-208ENST00000538827 HERC5Q9UII4 1024 aaKnown RBP16.6■□□□□ 0.25
CD4-208ENST00000538827 TPCN1Q9ULQ1 816 aa16.6■□□□□ 0.25
CD4-208ENST00000538827 PITPNM2Q9BZ72 1349 aa16.6■□□□□ 0.25
CD4-208ENST00000538827 DOCK1Q14185 1865 aa16.59■□□□□ 0.25
CD4-208ENST00000538827 GOLGA8BA8MQT2 603 aa16.59■□□□□ 0.25
CD4-208ENST00000538827 ADM5C9JUS6 153 aa16.59■□□□□ 0.25
CD4-208ENST00000538827 GDF11O95390 407 aa16.59■□□□□ 0.25
CD4-208ENST00000538827 NT5C2P49902 561 aa16.59■□□□□ 0.25
CD4-208ENST00000538827 IFIT1BQ5T764 474 aaKnown RBP16.59■□□□□ 0.25
CD4-208ENST00000538827 SULF1Q8IWU6 871 aa16.59■□□□□ 0.25
CD4-208ENST00000538827 ZSCAN31Q96LW9 406 aaPredicted RBP16.59■□□□□ 0.25
CD4-208ENST00000538827 LY9Q9HBG7 655 aa16.59■□□□□ 0.25
CD4-208ENST00000538827 SENP2Q9HC62 589 aa16.59■□□□□ 0.25
CD4-208ENST00000538827 PPP2R3BQ9Y5P8 575 aa16.59■□□□□ 0.25
CD4-208ENST00000538827 PLIN4Q96Q06 1357 aa16.59■□□□□ 0.25
CD4-208ENST00000538827 CERKLQ49MI3 558 aaPredicted RBP16.58■□□□□ 0.24
CD4-208ENST00000538827 PRAMEF18Q5VWM3 479 aa16.58■□□□□ 0.24
CD4-208ENST00000538827 MIGA2Q7L4E1 593 aa16.58■□□□□ 0.24
CD4-208ENST00000538827 CCDC83Q8IWF9 413 aa16.58■□□□□ 0.24
CD4-208ENST00000538827 ENAHQ8N8S7 591 aaPredicted RBP16.58■□□□□ 0.24
CD4-208ENST00000538827 NEDD1Q8NHV4 660 aa16.58■□□□□ 0.24
CD4-208ENST00000538827 HHIPL1Q96JK4 782 aa16.58■□□□□ 0.24
CD4-208ENST00000538827 SH2B1Q9NRF2 756 aaPredicted RBP16.58■□□□□ 0.24
CD4-208ENST00000538827 AOC2O75106 756 aa16.57■□□□□ 0.24
CD4-208ENST00000538827 SEC23AQ15436 765 aa16.57■□□□□ 0.24
CD4-208ENST00000538827 ME3Q16798 604 aa16.57■□□□□ 0.24
CD4-208ENST00000538827 CCDC178Q5BJE1 867 aa16.57■□□□□ 0.24
CD4-208ENST00000538827 NBPF12Q5TAG4 269 aaPredicted RBP16.57■□□□□ 0.24
CD4-208ENST00000538827 CST9Q5W186 159 aa16.57■□□□□ 0.24
CD4-208ENST00000538827 NECAB1Q8N987 351 aa16.57■□□□□ 0.24
CD4-208ENST00000538827 IGDCC4Q8TDY8 1250 aa16.57■□□□□ 0.24
CD4-208ENST00000538827 CCDC17Q96LX7 622 aa16.57■□□□□ 0.24
CD4-208ENST00000538827 TEPSINQ96N21 525 aa16.57■□□□□ 0.24
CD4-208ENST00000538827 MTA3Q9BTC8 594 aa16.57■□□□□ 0.24
CD4-208ENST00000538827 AGXT2Q9BYV1 514 aa16.57■□□□□ 0.24
CD4-208ENST00000538827 SLKQ9H2G2 1235 aaPredicted RBP16.57■□□□□ 0.24
CD4-208ENST00000538827 TAOK2Q9UL54 1235 aa16.57■□□□□ 0.24
CD4-208ENST00000538827 STX8Q9UNK0 236 aa16.57■□□□□ 0.24
CD4-208ENST00000538827 CASP8AP2Q9UKL3 1982 aa16.57■□□□□ 0.24
CD4-208ENST00000538827 SSC5DA1L4H1 1573 aa16.56■□□□□ 0.24
CD4-208ENST00000538827 GOLGA8AA7E2F4 631 aa16.56■□□□□ 0.24
CD4-208ENST00000538827 ATP2B2Q01814 1243 aa16.56■□□□□ 0.24
CD4-208ENST00000538827 ABCB5Q2M3G0 1257 aa16.56■□□□□ 0.24
CD4-208ENST00000538827 SHROOM1Q2M3G4 852 aaPredicted RBP16.56■□□□□ 0.24
CD4-208ENST00000538827 DCAF15Q66K64 600 aa16.56■□□□□ 0.24
CD4-208ENST00000538827 SYNE3Q6ZMZ3 975 aa16.56■□□□□ 0.24
CD4-208ENST00000538827 KRT26Q7Z3Y9 468 aa16.56■□□□□ 0.24
CD4-208ENST00000538827 MICU3Q86XE3 530 aa16.56■□□□□ 0.24
CD4-208ENST00000538827 CLEC10AQ8IUN9 316 aa16.56■□□□□ 0.24
CD4-208ENST00000538827 HOOK2Q96ED9 719 aa16.56■□□□□ 0.24
CD4-208ENST00000538827 MYL10Q9BUA6 226 aa16.56■□□□□ 0.24
CD4-208ENST00000538827 KAT14Q9H8E8 782 aa16.56■□□□□ 0.24
CD4-208ENST00000538827 PGAP2Q9UHJ9 254 aa16.56■□□□□ 0.24
CD4-208ENST00000538827 BRPF3Q9ULD4 1205 aa16.56■□□□□ 0.24
CD4-208ENST00000538827 SLC12A7Q9Y666 1083 aa16.56■□□□□ 0.24
CD4-208ENST00000538827 OTOFQ9HC10 1997 aa16.56■□□□□ 0.24
CD4-208ENST00000538827 RXRAP19793 462 aa16.55■□□□□ 0.24
CD4-208ENST00000538827 LIFRP42702 1097 aa16.55■□□□□ 0.24
CD4-208ENST00000538827 TATDN1Q6P1N9 297 aa16.55■□□□□ 0.24
CD4-208ENST00000538827 METTL16Q86W50 562 aaKnown RBP16.55■□□□□ 0.24
CD4-208ENST00000538827 CCDC144CPQ8IYA2 1237 aa16.55■□□□□ 0.24
CD4-208ENST00000538827 ZNF654Q8IZM8 581 aa16.55■□□□□ 0.24
CD4-208ENST00000538827 NUP133Q8WUM0 1156 aa16.55■□□□□ 0.24
CD4-208ENST00000538827 CEP95Q96GE4 821 aa16.55■□□□□ 0.24
CD4-208ENST00000538827 CABP5Q9NP86 173 aa16.55■□□□□ 0.24
CD4-208ENST00000538827 MTMR7Q9Y216 660 aa16.55■□□□□ 0.24
CD4-208ENST00000538827 ZBTB43O43298 467 aa16.54■□□□□ 0.24
CD4-208ENST00000538827 TBC1D12O60347 775 aa16.54■□□□□ 0.24
CD4-208ENST00000538827 GH2P01242 217 aa16.54■□□□□ 0.24
CD4-208ENST00000538827 METAP2P50579 478 aaKnown RBP eCLIP16.54■□□□□ 0.24
CD4-208ENST00000538827 CCT2P78371 535 aaKnown RBP16.54■□□□□ 0.24
CD4-208ENST00000538827 APOA5Q6Q788 366 aa16.54■□□□□ 0.24
CD4-208ENST00000538827 TMEM179Q6ZVK1 233 aa16.54■□□□□ 0.24
CD4-208ENST00000538827 CATIPQ7Z7H3 387 aa16.54■□□□□ 0.24
CD4-208ENST00000538827 USP48Q86UV5 1035 aa16.54■□□□□ 0.24
CD4-208ENST00000538827 SGMS1Q86VZ5 419 aa16.54■□□□□ 0.24
CD4-208ENST00000538827 TMTC2Q8N394 836 aa16.54■□□□□ 0.24
CD4-208ENST00000538827 FBXL16Q8N461 479 aa16.54■□□□□ 0.24
CD4-208ENST00000538827 ZC3H15Q8WU90 426 aaKnown RBP16.54■□□□□ 0.24
CD4-208ENST00000538827 GTF3C6Q969F1 213 aa16.54■□□□□ 0.24
CD4-208ENST00000538827 ZNF341Q9BYN7 854 aa16.54■□□□□ 0.24
CD4-208ENST00000538827 GLIS2Q9BZE0 524 aaPredicted RBP16.54■□□□□ 0.24
CD4-208ENST00000538827 IL17RBQ9NRM6 502 aa16.54■□□□□ 0.24
CD4-208ENST00000538827 TCP11L1Q9NUJ3 509 aa16.54■□□□□ 0.24
CD4-208ENST00000538827 PFKFB2O60825 505 aa16.53■□□□□ 0.24
CD4-208ENST00000538827 PDIA3P30101 505 aaKnown RBP16.53■□□□□ 0.24
CD4-208ENST00000538827 ICA1Q05084 483 aa16.53■□□□□ 0.24
CD4-208ENST00000538827 ST3GAL1Q11201 340 aa16.53■□□□□ 0.24
CD4-208ENST00000538827 PRKG1Q13976 671 aa16.53■□□□□ 0.24
CD4-208ENST00000538827 RRP1BQ14684 758 aaKnown RBP16.53■□□□□ 0.24
CD4-208ENST00000538827 SEPT2Q15019 361 aa16.53■□□□□ 0.24
CD4-208ENST00000538827 RAB3GAP1Q15042 981 aa16.53■□□□□ 0.24
CD4-208ENST00000538827 DLK2Q6UY11 383 aa16.53■□□□□ 0.24
CD4-208ENST00000538827 SAPCD2Q86UD0 394 aa16.53■□□□□ 0.24
CD4-208ENST00000538827 LRRC47Q8N1G4 583 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms