RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 SLAIN1Q8ND83 568 aa18.03■□□□□ 0.48
RAB40B-202ENST00000538809 OTUD7AQ8TE49 926 aaPredicted RBP18.03■□□□□ 0.48
RAB40B-202ENST00000538809 COA7Q96BR5 231 aa18.03■□□□□ 0.48
RAB40B-202ENST00000538809 SALL3Q9BXA9 1300 aa18.02■□□□□ 0.48
RAB40B-202ENST00000538809 KBTBD3Q8NAB2 608 aa18.02■□□□□ 0.48
RAB40B-202ENST00000538809 C12orf42Q96LP6 360 aa18.02■□□□□ 0.48
RAB40B-202ENST00000538809 TXNRD2Q9NNW7 524 aa18.02■□□□□ 0.48
RAB40B-202ENST00000538809 ATP8A2Q9NTI2 1148 aa18.02■□□□□ 0.48
RAB40B-202ENST00000538809 MORF4L1Q9UBU8 362 aa18.02■□□□□ 0.48
RAB40B-202ENST00000538809 SLC4A4Q9Y6R1 1079 aa18.02■□□□□ 0.48
RAB40B-202ENST00000538809 FRMPD3Q5JV73 1810 aa18.02■□□□□ 0.47
RAB40B-202ENST00000538809 CCL5P13501 91 aa18.01■□□□□ 0.47
RAB40B-202ENST00000538809 UBXN2AP68543 259 aa18.01■□□□□ 0.47
RAB40B-202ENST00000538809 HDAC1Q13547 482 aaPredicted RBP18.01■□□□□ 0.47
RAB40B-202ENST00000538809 CLEC10AQ8IUN9 316 aa18.01■□□□□ 0.47
RAB40B-202ENST00000538809 SHISA4Q96DD7 197 aa18.01■□□□□ 0.47
RAB40B-202ENST00000538809 PAGR1Q9BTK6 254 aa18.01■□□□□ 0.47
RAB40B-202ENST00000538809 ALPK3Q96L96 1907 aa18■□□□□ 0.47
RAB40B-202ENST00000538809 USP17L12C9JPN9 530 aa18■□□□□ 0.47
RAB40B-202ENST00000538809 USP17L21D6R901 530 aa18■□□□□ 0.47
RAB40B-202ENST00000538809 INHAP05111 366 aa18■□□□□ 0.47
RAB40B-202ENST00000538809 VCAM1P19320 739 aa18■□□□□ 0.47
RAB40B-202ENST00000538809 USP14P54578 494 aa18■□□□□ 0.47
RAB40B-202ENST00000538809 IRF5Q13568 498 aa18■□□□□ 0.47
RAB40B-202ENST00000538809 AAMPQ13685 434 aa18■□□□□ 0.47
RAB40B-202ENST00000538809 PRPF38BQ5VTL8 546 aaKnown RBP18■□□□□ 0.47
RAB40B-202ENST00000538809 PI4K2BQ8TCG2 481 aa18■□□□□ 0.47
RAB40B-202ENST00000538809 KIAA1683Q9H0B3 1180 aa18■□□□□ 0.47
RAB40B-202ENST00000538809 UNC93B1Q9H1C4 597 aa18■□□□□ 0.47
RAB40B-202ENST00000538809 SWAP70Q9UH65 585 aa18■□□□□ 0.47
RAB40B-202ENST00000538809 TTC41PQ6P2S7 1318 aa17.99■□□□□ 0.47
RAB40B-202ENST00000538809 AKR1B1P15121 316 aa17.99■□□□□ 0.47
RAB40B-202ENST00000538809 C12orf60Q5U649 245 aa17.99■□□□□ 0.47
RAB40B-202ENST00000538809 POTEEQ6S8J3 1075 aa17.99■□□□□ 0.47
RAB40B-202ENST00000538809 AMOTL1Q8IY63 956 aa17.99■□□□□ 0.47
RAB40B-202ENST00000538809 OSBP2Q969R2 916 aa17.99■□□□□ 0.47
RAB40B-202ENST00000538809 DDRGK1Q96HY6 314 aa17.99■□□□□ 0.47
RAB40B-202ENST00000538809 RNF208Q9H0X6 261 aa17.99■□□□□ 0.47
RAB40B-202ENST00000538809 RBPJLQ9UBG7 517 aa17.99■□□□□ 0.47
RAB40B-202ENST00000538809 ZNFX1Q9P2E3 1918 aaKnown RBP17.99■□□□□ 0.47
RAB40B-202ENST00000538809 A0A1W2PRG0 241 aa17.98■□□□□ 0.47
RAB40B-202ENST00000538809 USP17L15C9J2P7 530 aa17.98■□□□□ 0.47
RAB40B-202ENST00000538809 USP17L13C9JLJ4 530 aa17.98■□□□□ 0.47
RAB40B-202ENST00000538809 USP17L11C9JVI0 530 aa17.98■□□□□ 0.47
RAB40B-202ENST00000538809 USP17L18D6R9N7 530 aa17.98■□□□□ 0.47
RAB40B-202ENST00000538809 USP17L22D6RA61 530 aa17.98■□□□□ 0.47
RAB40B-202ENST00000538809 USP17L17D6RBQ6 530 aa17.98■□□□□ 0.47
RAB40B-202ENST00000538809 USP17L19D6RCP7 530 aa17.98■□□□□ 0.47
RAB40B-202ENST00000538809 USP17L20D6RJB6 530 aa17.98■□□□□ 0.47
RAB40B-202ENST00000538809 RNF113AO15541 343 aaKnown RBP17.98■□□□□ 0.47
RAB40B-202ENST00000538809 ERVK-9P63128 1117 aa17.98■□□□□ 0.47
RAB40B-202ENST00000538809 ERVK-24P63145 666 aa17.98■□□□□ 0.47
RAB40B-202ENST00000538809 USP17L24Q0WX57 530 aa17.98■□□□□ 0.47
RAB40B-202ENST00000538809 TMEM179Q6ZVK1 233 aa17.98■□□□□ 0.47
RAB40B-202ENST00000538809 GPRC5AQ8NFJ5 357 aa17.98■□□□□ 0.47
RAB40B-202ENST00000538809 APPBP2Q92624 585 aa17.98■□□□□ 0.47
RAB40B-202ENST00000538809 STRBPQ96SI9 672 aaKnown RBP17.98■□□□□ 0.47
RAB40B-202ENST00000538809 RPAP3Q9H6T3 665 aaPredicted RBP17.98■□□□□ 0.47
RAB40B-202ENST00000538809 M0R2C6 588 aa17.97■□□□□ 0.47
RAB40B-202ENST00000538809 CDK8P49336 464 aa17.97■□□□□ 0.47
RAB40B-202ENST00000538809 Q3C1V9 767 aa17.97■□□□□ 0.47
RAB40B-202ENST00000538809 CTR9Q6PD62 1173 aa17.97■□□□□ 0.47
RAB40B-202ENST00000538809 C16orf86Q6ZW13 317 aa17.97■□□□□ 0.47
RAB40B-202ENST00000538809 PXYLP1Q8TE99 480 aa17.97■□□□□ 0.47
RAB40B-202ENST00000538809 GTF3C2Q8WUA4 911 aaPredicted RBP17.97■□□□□ 0.47
RAB40B-202ENST00000538809 GCC1Q96CN9 775 aa17.97■□□□□ 0.47
RAB40B-202ENST00000538809 PORCNQ9H237 461 aa17.97■□□□□ 0.47
RAB40B-202ENST00000538809 ERC2O15083 957 aa17.96■□□□□ 0.47
RAB40B-202ENST00000538809 GPAA1O43292 621 aa17.96■□□□□ 0.47
RAB40B-202ENST00000538809 CNMDO75829 334 aa17.96■□□□□ 0.47
RAB40B-202ENST00000538809 MX1P20591 662 aa17.96■□□□□ 0.47
RAB40B-202ENST00000538809 ICA1Q05084 483 aa17.96■□□□□ 0.47
RAB40B-202ENST00000538809 CATSPERGQ6ZRH7 1159 aa17.96■□□□□ 0.47
RAB40B-202ENST00000538809 STK11IPQ8N1F8 1099 aa17.96■□□□□ 0.47
RAB40B-202ENST00000538809 ARPP21Q9UBL0 812 aaPredicted RBP17.96■□□□□ 0.47
RAB40B-202ENST00000538809 GJD2Q9UKL4 321 aa17.96■□□□□ 0.47
RAB40B-202ENST00000538809 PLXNA1Q9UIW2 1896 aa17.95■□□□□ 0.46
RAB40B-202ENST00000538809 GSG1L2A8MUP6 293 aa17.95■□□□□ 0.46
RAB40B-202ENST00000538809 GLRX3O76003 335 aaKnown RBP17.95■□□□□ 0.46
RAB40B-202ENST00000538809 GJB1P08034 283 aa17.95■□□□□ 0.46
RAB40B-202ENST00000538809 GJA8P48165 433 aa17.95■□□□□ 0.46
RAB40B-202ENST00000538809 KIAA1755Q5JYT7 1200 aa17.95■□□□□ 0.46
RAB40B-202ENST00000538809 ANKRD45Q5TZF3 282 aa17.95■□□□□ 0.46
RAB40B-202ENST00000538809 EXOC6Q8TAG9 804 aa17.95■□□□□ 0.46
RAB40B-202ENST00000538809 FSD1Q9BTV5 496 aa17.95■□□□□ 0.46
RAB40B-202ENST00000538809 EPB41L4AQ9HCS5 686 aaPredicted RBP17.95■□□□□ 0.46
RAB40B-202ENST00000538809 CEP290O15078 2479 aa17.95■□□□□ 0.46
RAB40B-202ENST00000538809 ZNF236Q9UL36 1845 aa17.95■□□□□ 0.46
RAB40B-202ENST00000538809 SPDYE16A6NNV3 312 aaPredicted RBP17.94■□□□□ 0.46
RAB40B-202ENST00000538809 ZFYP08048 801 aaPredicted RBP17.94■□□□□ 0.46
RAB40B-202ENST00000538809 CYP2B6P20813 491 aa17.94■□□□□ 0.46
RAB40B-202ENST00000538809 TRIM32Q13049 653 aa17.94■□□□□ 0.46
RAB40B-202ENST00000538809 CCAR1Q8IX12 1150 aaKnown RBP17.94■□□□□ 0.46
RAB40B-202ENST00000538809 SMC5Q8IY18 1101 aa17.94■□□□□ 0.46
RAB40B-202ENST00000538809 U2AF1L4Q8WU68 220 aaKnown RBP17.94■□□□□ 0.46
RAB40B-202ENST00000538809 SEC62Q99442 399 aaKnown RBP17.94■□□□□ 0.46
RAB40B-202ENST00000538809 TANGO6Q9C0B7 1094 aa17.94■□□□□ 0.46
RAB40B-202ENST00000538809 ARHGEF10LQ9HCE6 1279 aa17.94■□□□□ 0.46
RAB40B-202ENST00000538809 ZBTB47Q9UFB7 747 aaPredicted RBP17.94■□□□□ 0.46
RAB40B-202ENST00000538809 RABGAP1Q9Y3P9 1069 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms