RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 MLKLQ8NB16 471 aa13.66□□□□□ -0.22
CPNE8-203ENST00000538596 ENOX1Q8TC92 643 aaKnown RBP13.66□□□□□ -0.22
CPNE8-203ENST00000538596 EPC1Q9H2F5 836 aa13.66□□□□□ -0.22
CPNE8-203ENST00000538596 TRIM75PA6NK02 468 aa13.66□□□□□ -0.22
CPNE8-203ENST00000538596 ADAMTS3O15072 1205 aa13.66□□□□□ -0.22
CPNE8-203ENST00000538596 VEGFAP15692 232 aaPredicted RBP13.66□□□□□ -0.22
CPNE8-203ENST00000538596 MTF1Q14872 753 aa13.66□□□□□ -0.22
CPNE8-203ENST00000538596 ARHGAP29Q52LW3 1261 aa13.66□□□□□ -0.22
CPNE8-203ENST00000538596 SPECC1LQ69YQ0 1117 aa13.66□□□□□ -0.22
CPNE8-203ENST00000538596 SYMPKQ92797 1274 aaKnown RBP13.66□□□□□ -0.22
CPNE8-203ENST00000538596 WDR24Q96S15 920 aa13.66□□□□□ -0.22
CPNE8-203ENST00000538596 PHF20Q9BVI0 1012 aa13.66□□□□□ -0.22
CPNE8-203ENST00000538596 RNF26Q9BY78 433 aaPredicted RBP13.66□□□□□ -0.22
CPNE8-203ENST00000538596 UBAP1LF5GYI3 381 aa13.65□□□□□ -0.22
CPNE8-203ENST00000538596 ELOA2Q8IYF1 753 aaPredicted RBP13.65□□□□□ -0.22
CPNE8-203ENST00000538596 MARCH10Q8NA82 808 aaPredicted RBP13.65□□□□□ -0.22
CPNE8-203ENST00000538596 GTPBP4Q9BZE4 634 aaKnown RBP13.65□□□□□ -0.22
CPNE8-203ENST00000538596 JAG2Q9Y219 1238 aa13.65□□□□□ -0.22
CPNE8-203ENST00000538596 AHDC1Q5TGY3 1603 aaPredicted RBP13.65□□□□□ -0.22
CPNE8-203ENST00000538596 PLCH1Q4KWH8 1693 aa13.65□□□□□ -0.22
CPNE8-203ENST00000538596 ARHGAP6O43182 974 aa13.65□□□□□ -0.22
CPNE8-203ENST00000538596 KCNQ2O43526 872 aa13.65□□□□□ -0.22
CPNE8-203ENST00000538596 KRT2P35908 639 aa13.65□□□□□ -0.22
CPNE8-203ENST00000538596 DHX8Q14562 1220 aaKnown RBP13.65□□□□□ -0.22
CPNE8-203ENST00000538596 DDB1Q16531 1140 aa13.65□□□□□ -0.22
CPNE8-203ENST00000538596 CEP131Q9UPN4 1083 aa13.65□□□□□ -0.22
CPNE8-203ENST00000538596 PARP3Q9Y6F1 533 aa13.65□□□□□ -0.22
CPNE8-203ENST00000538596 ZNF804BA4D1E1 1349 aa13.65□□□□□ -0.22
CPNE8-203ENST00000538596 PHLPP2Q6ZVD8 1323 aa13.65□□□□□ -0.22
CPNE8-203ENST00000538596 USP17L12C9JPN9 530 aa13.65□□□□□ -0.22
CPNE8-203ENST00000538596 USP17L21D6R901 530 aa13.65□□□□□ -0.22
CPNE8-203ENST00000538596 PLCD1P51178 756 aa13.65□□□□□ -0.22
CPNE8-203ENST00000538596 TROAPQ12815 778 aa13.65□□□□□ -0.22
CPNE8-203ENST00000538596 FAM47AQ5JRC9 791 aa13.65□□□□□ -0.22
CPNE8-203ENST00000538596 SPATA20Q8TB22 786 aa13.65□□□□□ -0.22
CPNE8-203ENST00000538596 CARD6Q9BX69 1037 aa13.65□□□□□ -0.22
CPNE8-203ENST00000538596 ANAPC4Q9UJX5 808 aa13.65□□□□□ -0.22
CPNE8-203ENST00000538596 H2AFXP16104 143 aaPredicted RBP13.64□□□□□ -0.23
CPNE8-203ENST00000538596 CLCN6P51797 869 aa13.64□□□□□ -0.23
CPNE8-203ENST00000538596 NPY5RQ15761 445 aa13.64□□□□□ -0.23
CPNE8-203ENST00000538596 CTR9Q6PD62 1173 aa13.64□□□□□ -0.23
CPNE8-203ENST00000538596 CATIPQ7Z7H3 387 aa13.64□□□□□ -0.23
CPNE8-203ENST00000538596 ANKRD18AQ8IVF6 992 aa13.64□□□□□ -0.23
CPNE8-203ENST00000538596 CCDC24Q8N4L8 307 aa13.64□□□□□ -0.23
CPNE8-203ENST00000538596 CPLX3Q8WVH0 158 aa13.64□□□□□ -0.23
CPNE8-203ENST00000538596 CELF1Q92879 486 aaKnown RBP13.64□□□□□ -0.23
CPNE8-203ENST00000538596 PAGE5Q96GU1 130 aa13.64□□□□□ -0.23
CPNE8-203ENST00000538596 FAM84BQ96KN1 310 aaPredicted RBP13.64□□□□□ -0.23
CPNE8-203ENST00000538596 RTL9Q8NET4 1388 aa13.64□□□□□ -0.23
CPNE8-203ENST00000538596 CACNA1SQ13698 1873 aa13.64□□□□□ -0.23
CPNE8-203ENST00000538596 A0A0U1RQJ8 604 aa13.64□□□□□ -0.23
CPNE8-203ENST00000538596 CCP110O43303 1012 aa13.64□□□□□ -0.23
CPNE8-203ENST00000538596 NR1I3Q14994 352 aa13.64□□□□□ -0.23
CPNE8-203ENST00000538596 KARSQ15046 597 aaKnown RBP13.64□□□□□ -0.23
CPNE8-203ENST00000538596 ATRIPQ8WXE1 791 aa13.64□□□□□ -0.23
CPNE8-203ENST00000538596 CDC5LQ99459 802 aaKnown RBP13.64□□□□□ -0.23
CPNE8-203ENST00000538596 IRX2Q9BZI1 471 aaPredicted RBP13.64□□□□□ -0.23
CPNE8-203ENST00000538596 MYO1BO43795 1136 aa13.63□□□□□ -0.23
CPNE8-203ENST00000538596 CYP2D6P10635 497 aa13.63□□□□□ -0.23
CPNE8-203ENST00000538596 GNG11P61952 73 aa13.63□□□□□ -0.23
CPNE8-203ENST00000538596 KRT222Q8N1A0 295 aa13.63□□□□□ -0.23
CPNE8-203ENST00000538596 SRBD1Q8N5C6 995 aaKnown RBP13.63□□□□□ -0.23
CPNE8-203ENST00000538596 MTA3Q9BTC8 594 aa13.63□□□□□ -0.23
CPNE8-203ENST00000538596 AATFQ9NY61 560 aaKnown RBP eCLIP13.63□□□□□ -0.23
CPNE8-203ENST00000538596 DACH1Q9UI36 760 aa13.63□□□□□ -0.23
CPNE8-203ENST00000538596 MINPP1Q9UNW1 487 aa13.63□□□□□ -0.23
CPNE8-203ENST00000538596 COL14A1Q05707 1796 aaKnown RBP13.63□□□□□ -0.23
CPNE8-203ENST00000538596 SOWAHDA6NJG2 315 aa13.63□□□□□ -0.23
CPNE8-203ENST00000538596 ZSCAN12O43309 604 aa13.63□□□□□ -0.23
CPNE8-203ENST00000538596 PRPF3O43395 683 aaKnown RBP13.63□□□□□ -0.23
CPNE8-203ENST00000538596 TOM1O60784 492 aa13.63□□□□□ -0.23
CPNE8-203ENST00000538596 RCAN1P53805 252 aa13.63□□□□□ -0.23
CPNE8-203ENST00000538596 DPYDQ12882 1025 aa13.63□□□□□ -0.23
CPNE8-203ENST00000538596 APTXQ7Z2E3 356 aaKnown RBP13.63□□□□□ -0.23
CPNE8-203ENST00000538596 BLZF1Q9H2G9 400 aa13.63□□□□□ -0.23
CPNE8-203ENST00000538596 GNL3LQ9NVN8 582 aaKnown RBP13.63□□□□□ -0.23
CPNE8-203ENST00000538596 MYH13Q9UKX3 1938 aa13.63□□□□□ -0.23
CPNE8-203ENST00000538596 DUOX1Q9NRD9 1551 aa13.62□□□□□ -0.23
CPNE8-203ENST00000538596 SLFN14P0C7P3 912 aa13.62□□□□□ -0.23
CPNE8-203ENST00000538596 XBP1P17861 261 aa13.62□□□□□ -0.23
CPNE8-203ENST00000538596 IQCA1Q86XH1 822 aa13.62□□□□□ -0.23
CPNE8-203ENST00000538596 TRIML1Q8N9V2 468 aa13.62□□□□□ -0.23
CPNE8-203ENST00000538596 TFCP2L1Q9NZI6 479 aa13.62□□□□□ -0.23
CPNE8-203ENST00000538596 STX10O60499 249 aa13.62□□□□□ -0.23
CPNE8-203ENST00000538596 PTGDRQ13258 359 aa13.62□□□□□ -0.23
CPNE8-203ENST00000538596 CAVIN4Q5BKX8 364 aa13.62□□□□□ -0.23
CPNE8-203ENST00000538596 KANK3Q6NY19 840 aa13.62□□□□□ -0.23
CPNE8-203ENST00000538596 MNS1Q8NEH6 495 aa13.62□□□□□ -0.23
CPNE8-203ENST00000538596 UBXN4Q92575 508 aa13.62□□□□□ -0.23
CPNE8-203ENST00000538596 MRPL44Q9H9J2 332 aaKnown RBP13.62□□□□□ -0.23
CPNE8-203ENST00000538596 FAM53CQ9NYF3 392 aa13.62□□□□□ -0.23
CPNE8-203ENST00000538596 A0A1B0GTH6 734 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 CUL4BQ13620 913 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 PIK3AP1Q6ZUJ8 805 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 TMTC3Q6ZXV5 915 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 SLC51AQ86UW1 340 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 TNFRSF25Q93038 417 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 SYNRGQ9UMZ2 1314 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 TADA3O75528 432 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 TUBB4AP04350 444 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms