RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 TNFRSF25Q93038 417 aa11.69□□□□□ -0.54
CD9-207ENST00000538418 SPOCK3Q9BQ16 436 aa11.69□□□□□ -0.54
CD9-207ENST00000538418 CORO1BQ9BR76 489 aa11.69□□□□□ -0.54
CD9-207ENST00000538418 CCDC86Q9H6F5 360 aaKnown RBP11.69□□□□□ -0.54
CD9-207ENST00000538418 FRRS1LQ9P0K9 344 aa11.69□□□□□ -0.54
CD9-207ENST00000538418 DACH1Q9UI36 760 aa11.69□□□□□ -0.54
CD9-207ENST00000538418 FAM187AA6NFU0 413 aa11.68□□□□□ -0.54
CD9-207ENST00000538418 CHURC1-FNTBB4DL54 471 aa11.68□□□□□ -0.54
CD9-207ENST00000538418 EYA4O95677 639 aa11.68□□□□□ -0.54
CD9-207ENST00000538418 ARAFP10398 606 aa11.68□□□□□ -0.54
CD9-207ENST00000538418 NAT2P11245 290 aa11.68□□□□□ -0.54
CD9-207ENST00000538418 RAG1P15918 1043 aa11.68□□□□□ -0.54
CD9-207ENST00000538418 SDSP20132 328 aa11.68□□□□□ -0.54
CD9-207ENST00000538418 GNALP38405 381 aa11.68□□□□□ -0.54
CD9-207ENST00000538418 SMCPP49901 116 aaPredicted RBP11.68□□□□□ -0.54
CD9-207ENST00000538418 MCL1Q07820 350 aa11.68□□□□□ -0.54
CD9-207ENST00000538418 BBS9Q3SYG4 887 aa11.68□□□□□ -0.54
CD9-207ENST00000538418 DDX46Q7L014 1031 aaKnown RBP11.68□□□□□ -0.54
CD9-207ENST00000538418 SCUBE1Q8IWY4 988 aa11.68□□□□□ -0.54
CD9-207ENST00000538418 AARSD1Q9BTE6 412 aaKnown RBP11.68□□□□□ -0.54
CD9-207ENST00000538418 ADAM30Q9UKF2 790 aa11.68□□□□□ -0.54
CD9-207ENST00000538418 ABCC10Q5T3U5 1492 aa11.68□□□□□ -0.54
CD9-207ENST00000538418 SOBPA7XYQ1 873 aa11.67□□□□□ -0.54
CD9-207ENST00000538418 ECEL1O95672 775 aa11.67□□□□□ -0.54
CD9-207ENST00000538418 PGRP06401 933 aa11.67□□□□□ -0.54
CD9-207ENST00000538418 POU4F3Q15319 338 aa11.67□□□□□ -0.54
CD9-207ENST00000538418 MAP9Q49MG5 647 aa11.67□□□□□ -0.54
CD9-207ENST00000538418 YOD1Q5VVQ6 348 aaPredicted RBP11.67□□□□□ -0.54
CD9-207ENST00000538418 GDF6Q6KF10 455 aaPredicted RBP11.67□□□□□ -0.54
CD9-207ENST00000538418 STRA8Q7Z7C7 330 aa11.67□□□□□ -0.54
CD9-207ENST00000538418 CACTIN-AS1Q8N1I8 211 aa11.67□□□□□ -0.54
CD9-207ENST00000538418 RPS6KC1Q96S38 1066 aa11.67□□□□□ -0.54
CD9-207ENST00000538418 KATNA1O75449 491 aa11.66□□□□□ -0.54
CD9-207ENST00000538418 MAP7Q14244 749 aa11.66□□□□□ -0.54
CD9-207ENST00000538418 SLC7A3Q8WY07 619 aa11.66□□□□□ -0.54
CD9-207ENST00000538418 DDX1Q92499 740 aaKnown RBP11.66□□□□□ -0.54
CD9-207ENST00000538418 ASPSCR1Q9BZE9 553 aa11.66□□□□□ -0.54
CD9-207ENST00000538418 MAPKBP1O60336 1514 aa11.65□□□□□ -0.54
CD9-207ENST00000538418 ANKRD34BA5PLL1 514 aa11.65□□□□□ -0.54
CD9-207ENST00000538418 DCDC2CA8MYV0 355 aa11.65□□□□□ -0.54
CD9-207ENST00000538418 ZNF862O60290 1169 aa11.65□□□□□ -0.54
CD9-207ENST00000538418 POLR2BP30876 1174 aaKnown RBP11.65□□□□□ -0.54
CD9-207ENST00000538418 GRK4P32298 578 aa11.65□□□□□ -0.54
CD9-207ENST00000538418 ARL4DP49703 201 aa11.65□□□□□ -0.54
CD9-207ENST00000538418 PCBP4P57723 403 aaKnown RBP11.65□□□□□ -0.54
CD9-207ENST00000538418 HNRNPUQ00839 825 aaKnown RBP eCLIP11.65□□□□□ -0.54
CD9-207ENST00000538418 LRRC41Q15345 812 aa11.65□□□□□ -0.54
CD9-207ENST00000538418 PPM1KQ8N3J5 372 aa11.65□□□□□ -0.54
CD9-207ENST00000538418 TTC9Q92623 222 aa11.65□□□□□ -0.54
CD9-207ENST00000538418 DHRS1Q96LJ7 313 aa11.65□□□□□ -0.54
CD9-207ENST00000538418 APBA2Q99767 749 aa11.65□□□□□ -0.54
CD9-207ENST00000538418 NRSN2Q9GZP1 204 aa11.65□□□□□ -0.54
CD9-207ENST00000538418 CARMIL1Q5VZK9 1371 aa11.65□□□□□ -0.55
CD9-207ENST00000538418 PTPRGP23470 1445 aa11.64□□□□□ -0.55
CD9-207ENST00000538418 SHTN1A0MZ66 631 aa11.64□□□□□ -0.55
CD9-207ENST00000538418 PRAMEF27A3QJZ7 478 aa11.64□□□□□ -0.55
CD9-207ENST00000538418 CAND2O75155 1236 aa11.64□□□□□ -0.55
CD9-207ENST00000538418 CDC25BP30305 580 aa11.64□□□□□ -0.55
CD9-207ENST00000538418 PPP2R2AP63151 447 aa11.64□□□□□ -0.55
CD9-207ENST00000538418 C19orf57Q0VDD7 668 aa11.64□□□□□ -0.55
CD9-207ENST00000538418 UBE4AQ14139 1066 aa11.64□□□□□ -0.55
CD9-207ENST00000538418 FAM9AQ8IZU1 332 aaPredicted RBP11.64□□□□□ -0.55
CD9-207ENST00000538418 AHI1Q8N157 1196 aa11.64□□□□□ -0.55
CD9-207ENST00000538418 LEO1Q8WVC0 666 aaPredicted RBP11.64□□□□□ -0.55
CD9-207ENST00000538418 ACSF2Q96CM8 615 aaPredicted RBP11.64□□□□□ -0.55
CD9-207ENST00000538418 LRP2BPQ9P2M1 347 aa11.64□□□□□ -0.55
CD9-207ENST00000538418 CARMIL2Q6F5E8 1435 aa11.63□□□□□ -0.55
CD9-207ENST00000538418 SCGB1D2O95969 90 aa11.63□□□□□ -0.55
CD9-207ENST00000538418 MAOBP27338 520 aa11.63□□□□□ -0.55
CD9-207ENST00000538418 ADH7P40394 386 aa11.63□□□□□ -0.55
CD9-207ENST00000538418 NEK2P51955 445 aa11.63□□□□□ -0.55
CD9-207ENST00000538418 PMS1P54277 932 aaKnown RBP11.63□□□□□ -0.55
CD9-207ENST00000538418 NECAB2Q7Z6G3 386 aa11.63□□□□□ -0.55
CD9-207ENST00000538418 SUSD2Q9UGT4 822 aa11.63□□□□□ -0.55
CD9-207ENST00000538418 PDZRN3Q9UPQ7 1066 aa11.63□□□□□ -0.55
CD9-207ENST00000538418 PHLDB1Q86UU1 1377 aa11.63□□□□□ -0.55
CD9-207ENST00000538418 ITGA6P23229 1130 aa11.62□□□□□ -0.55
CD9-207ENST00000538418 SUMO1P63165 101 aaKnown RBP11.62□□□□□ -0.55
CD9-207ENST00000538418 PIP4K2BP78356 416 aa11.62□□□□□ -0.55
CD9-207ENST00000538418 PDE3AQ14432 1141 aa11.62□□□□□ -0.55
CD9-207ENST00000538418 PPFIBP1Q86W92 1011 aa11.62□□□□□ -0.55
CD9-207ENST00000538418 C12orf40Q86WS4 652 aa11.62□□□□□ -0.55
CD9-207ENST00000538418 WDR66Q8TBY9 1149 aa11.62□□□□□ -0.55
CD9-207ENST00000538418 AVENQ9NQS1 362 aaPredicted RBP11.62□□□□□ -0.55
CD9-207ENST00000538418 SUCOQ9UBS9 1254 aaKnown RBP11.62□□□□□ -0.55
CD9-207ENST00000538418 RUSC2Q8N2Y8 1516 aa11.61□□□□□ -0.55
CD9-207ENST00000538418 FAM83GA6ND36 823 aa11.61□□□□□ -0.55
CD9-207ENST00000538418 C2CD2LO14523 706 aa11.61□□□□□ -0.55
CD9-207ENST00000538418 DNAJC8O75937 253 aaPredicted RBP11.61□□□□□ -0.55
CD9-207ENST00000538418 FGFR1P11362 822 aa11.61□□□□□ -0.55
CD9-207ENST00000538418 LIG1P18858 919 aa11.61□□□□□ -0.55
CD9-207ENST00000538418 RAB27AP51159 221 aa11.61□□□□□ -0.55
CD9-207ENST00000538418 STRN3Q13033 797 aa11.61□□□□□ -0.55
CD9-207ENST00000538418 KIF4BQ2VIQ3 1234 aa11.61□□□□□ -0.55
CD9-207ENST00000538418 FAM13CQ8NE31 585 aa11.61□□□□□ -0.55
CD9-207ENST00000538418 WNT8BQ93098 351 aa11.61□□□□□ -0.55
CD9-207ENST00000538418 WDR89Q96FK6 387 aaPredicted RBP11.61□□□□□ -0.55
CD9-207ENST00000538418 SLC6A18Q96N87 628 aa11.61□□□□□ -0.55
CD9-207ENST00000538418 FAM86C1Q9NVL1 165 aa11.61□□□□□ -0.55
CD9-207ENST00000538418 SLC5A4Q9NY91 659 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms