RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 MORC2Q9Y6X9 1032 aaPredicted RBP6.25□□□□□ -1.41
CSMD1-215ENST00000537824 RILPL1Q5EBL4 403 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 ALS2CLQ60I27 953 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 PPP1R12AO14974 1030 aaPredicted RBP6.25□□□□□ -1.41
CSMD1-215ENST00000537824 CCDC152Q4G0S7 254 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 JARID2Q92833 1246 aaPredicted RBP6.25□□□□□ -1.41
CSMD1-215ENST00000537824 CCDC51Q96ER9 411 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 CNOT10Q9H9A5 744 aaKnown RBP6.25□□□□□ -1.41
CSMD1-215ENST00000537824 ARHGEF9O43307 516 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 CTNND1O60716 968 aaKnown RBP6.25□□□□□ -1.41
CSMD1-215ENST00000537824 NR1I2O75469 434 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 ELF1P32519 619 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 LONP1P36776 959 aaKnown RBP6.25□□□□□ -1.41
CSMD1-215ENST00000537824 SLC4A8Q2Y0W8 1093 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 MAPKBP1O60336 1514 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 KCNK3O14649 394 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 SLC5A1P13866 664 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 TYW1BQ6NUM6 668 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 ADAT2Q7Z6V5 191 aaKnown RBP6.25□□□□□ -1.41
CSMD1-215ENST00000537824 CCDC105Q8IYK2 499 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.25□□□□□ -1.41
CSMD1-215ENST00000537824 NOTCH3Q9UM47 2321 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 PTPROQ16827 1216 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 GEN1Q17RS7 908 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 NBPF9Q3BBW0 867 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 SLC30A9Q6PML9 568 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 OTUD7AQ8TE49 926 aaPredicted RBP6.25□□□□□ -1.41
CSMD1-215ENST00000537824 MEIS3Q99687 375 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 VPS37BQ9H9H4 285 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 DOCK8Q8NF50 2099 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 UNC13CQ8NB66 2214 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 NBPF7P0C2Y1 421 aaPredicted RBP6.25□□□□□ -1.41
CSMD1-215ENST00000537824 INTS9Q9NV88 658 aaKnown RBP6.25□□□□□ -1.41
CSMD1-215ENST00000537824 CCDC151A5D8V7 595 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 PSDA5PKW4 1024 aaPredicted RBP6.25□□□□□ -1.41
CSMD1-215ENST00000537824 GFAPP14136 432 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 RBM5P52756 815 aaKnown RBP eCLIP6.25□□□□□ -1.41
CSMD1-215ENST00000537824 ZNF287Q9HBT7 754 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 MYO7BQ6PIF6 2116 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 CHGBP05060 677 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 CABP4P57796 275 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 PSMC1P62191 440 aaKnown RBP6.25□□□□□ -1.41
CSMD1-215ENST00000537824 KLHL29Q96CT2 875 aa6.25□□□□□ -1.41
CSMD1-215ENST00000537824 TADA3O75528 432 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 TNFAIP3P21580 790 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 NBPF6Q5VWK0 638 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 NBPF10Q6P3W6 841 aaKnown RBP6.24□□□□□ -1.41
CSMD1-215ENST00000537824 NBPF5PQ86XG9 351 aaPredicted RBP6.24□□□□□ -1.41
CSMD1-215ENST00000537824 NBPF4Q96M43 638 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.24□□□□□ -1.41
CSMD1-215ENST00000537824 FAM170AA1A519 330 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 THAP12O43422 761 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 KRT10P13645 584 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 FBXW10Q5XX13 1052 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 RHPN1Q8TCX5 695 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 IL16Q14005 1332 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 EEF1B2P24534 225 aaKnown RBP6.24□□□□□ -1.41
CSMD1-215ENST00000537824 HYOU1Q9Y4L1 999 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 GNAT3A8MTJ3 354 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 ZNF174Q15697 407 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 SLC9C1Q4G0N8 1177 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.24□□□□□ -1.41
CSMD1-215ENST00000537824 KRT12Q99456 494 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 EHMT1Q9H9B1 1298 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 ANLNQ9NQW6 1124 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 AMOTL2Q9Y2J4 779 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 CKAP5Q14008 2032 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 ZBBXA8MT70 800 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 INPP1P49441 399 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 APBA1Q02410 837 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 OR8K1Q8NGG5 319 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 EIF2AQ9BY44 585 aaKnown RBP6.24□□□□□ -1.41
CSMD1-215ENST00000537824 DPH5Q9H2P9 285 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 RTL9Q8NET4 1388 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 OTOFQ9HC10 1997 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 SLFNL1Q499Z3 407 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 MCMDC2Q4G0Z9 681 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 CSGALNACT2Q8N6G5 542 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 KIF9Q9HAQ2 790 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 S100BP04271 92 aaPredicted RBP6.24□□□□□ -1.41
CSMD1-215ENST00000537824 DEUP1Q05D60 604 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 GRAMD1BQ3KR37 738 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 NXNQ6DKJ4 435 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 RRAGAQ7L523 313 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 TBC1D1Q86TI0 1168 aaPredicted RBP6.24□□□□□ -1.41
CSMD1-215ENST00000537824 LSM14BQ9BX40 385 aaKnown RBP6.24□□□□□ -1.41
CSMD1-215ENST00000537824 SPTLC3Q9NUV7 552 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 NR1D1P20393 614 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 PDCLQ13371 301 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 NNTQ13423 1086 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 KMT5BQ4FZB7 885 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 IFIT5Q13325 482 aaKnown RBP6.24□□□□□ -1.41
CSMD1-215ENST00000537824 SEPT8Q92599 483 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 RHBDL2Q9NX52 303 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 BIN2Q9UBW5 565 aaPredicted RBP6.24□□□□□ -1.41
CSMD1-215ENST00000537824 TSC22D4Q9Y3Q8 395 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 NUP58Q9BVL2 599 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 H0Y3Z8 333 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 CALML3P27482 149 aa6.24□□□□□ -1.41
CSMD1-215ENST00000537824 TRAF1Q13077 416 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms