RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-215ENST00000537296 FAM227BQ96M60 508 aa13.01□□□□□ -0.33
LDHA-215ENST00000537296 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
LDHA-215ENST00000537296 AGTPBP1Q9UPW5 1226 aa13.01□□□□□ -0.33
LDHA-215ENST00000537296 TRIM17Q9Y577 477 aa13.01□□□□□ -0.33
LDHA-215ENST00000537296 AKR1B1P15121 316 aa13□□□□□ -0.33
LDHA-215ENST00000537296 BACE1P56817 501 aa13□□□□□ -0.33
LDHA-215ENST00000537296 SEPT2Q15019 361 aa13□□□□□ -0.33
LDHA-215ENST00000537296 ZYXQ15942 572 aaKnown RBP13□□□□□ -0.33
LDHA-215ENST00000537296 SH3D19Q5HYK7 790 aa13□□□□□ -0.33
LDHA-215ENST00000537296 OTOP1Q7RTM1 612 aa13□□□□□ -0.33
LDHA-215ENST00000537296 AS3MTQ9HBK9 375 aa13□□□□□ -0.33
LDHA-215ENST00000537296 A0A0D9SFI3 127 aa12.99□□□□□ -0.33
LDHA-215ENST00000537296 TRIM6-TRIM34B2RNG4 842 aa12.99□□□□□ -0.33
LDHA-215ENST00000537296 MPHOSPH10O00566 681 aaKnown RBP12.99□□□□□ -0.33
LDHA-215ENST00000537296 CDK8P49336 464 aa12.99□□□□□ -0.33
LDHA-215ENST00000537296 LACTBP83111 547 aaPredicted RBP12.99□□□□□ -0.33
LDHA-215ENST00000537296 VPS53Q5VIR6 699 aa12.99□□□□□ -0.33
LDHA-215ENST00000537296 C16orf86Q6ZW13 317 aa12.99□□□□□ -0.33
LDHA-215ENST00000537296 PROCA1Q8NCQ7 364 aaPredicted RBP12.99□□□□□ -0.33
LDHA-215ENST00000537296 RILPL2Q969X0 211 aa12.99□□□□□ -0.33
LDHA-215ENST00000537296 ERO1AQ96HE7 468 aa12.99□□□□□ -0.33
LDHA-215ENST00000537296 TBC1D2Q9BYX2 928 aa12.99□□□□□ -0.33
LDHA-215ENST00000537296 OSBPL3Q9H4L5 887 aa12.99□□□□□ -0.33
LDHA-215ENST00000537296 EMILIN3Q9NT22 766 aa12.99□□□□□ -0.33
LDHA-215ENST00000537296 GREB1LQ9C091 1923 aaPredicted RBP12.99□□□□□ -0.33
LDHA-215ENST00000537296 A0A1W2PRG0 241 aa12.98□□□□□ -0.33
LDHA-215ENST00000537296 CCDC85CA6NKD9 419 aa12.98□□□□□ -0.33
LDHA-215ENST00000537296 MINDY4BA8MYZ0 360 aa12.98□□□□□ -0.33
LDHA-215ENST00000537296 USP17L10C9JJH3 530 aa12.98□□□□□ -0.33
LDHA-215ENST00000537296 PEX10O60683 326 aa12.98□□□□□ -0.33
LDHA-215ENST00000537296 APPP05067 770 aa12.98□□□□□ -0.33
LDHA-215ENST00000537296 BCRP11274 1271 aa12.98□□□□□ -0.33
LDHA-215ENST00000537296 IFNL3Q8IZI9 196 aa12.98□□□□□ -0.33
LDHA-215ENST00000537296 DDRGK1Q96HY6 314 aa12.98□□□□□ -0.33
LDHA-215ENST00000537296 PARK7Q99497 189 aaKnown RBP12.98□□□□□ -0.33
LDHA-215ENST00000537296 GINM1Q9NU53 330 aa12.98□□□□□ -0.33
LDHA-215ENST00000537296 ARPP21Q9UBL0 812 aaPredicted RBP12.98□□□□□ -0.33
LDHA-215ENST00000537296 HPS5Q9UPZ3 1129 aa12.98□□□□□ -0.33
LDHA-215ENST00000537296 DOCK3Q8IZD9 2030 aa12.98□□□□□ -0.33
LDHA-215ENST00000537296 PATL2C9JE40 543 aaKnown RBP12.98□□□□□ -0.33
LDHA-215ENST00000537296 TDO2P48775 406 aa12.98□□□□□ -0.33
LDHA-215ENST00000537296 NMIQ13287 307 aaPredicted RBP12.98□□□□□ -0.33
LDHA-215ENST00000537296 LRRFIP1Q32MZ4 808 aaKnown RBP12.98□□□□□ -0.33
LDHA-215ENST00000537296 SBK1Q52WX2 424 aa12.98□□□□□ -0.33
LDHA-215ENST00000537296 ZNF589Q86UQ0 364 aaPredicted RBP12.98□□□□□ -0.33
LDHA-215ENST00000537296 SKAP1Q86WV1 359 aa12.98□□□□□ -0.33
LDHA-215ENST00000537296 SIAH1Q8IUQ4 282 aa12.98□□□□□ -0.33
LDHA-215ENST00000537296 ASCC2Q9H1I8 757 aaPredicted RBP12.98□□□□□ -0.33
LDHA-215ENST00000537296 EFCC1Q9HA90 598 aa12.98□□□□□ -0.33
LDHA-215ENST00000537296 CABP5Q9NP86 173 aa12.98□□□□□ -0.33
LDHA-215ENST00000537296 SWAP70Q9UH65 585 aa12.98□□□□□ -0.33
LDHA-215ENST00000537296 SLC45A1Q9Y2W3 748 aa12.98□□□□□ -0.33
LDHA-215ENST00000537296 ROBO3Q96MS0 1386 aa12.97□□□□□ -0.33
LDHA-215ENST00000537296 GNAT2P19087 354 aa12.97□□□□□ -0.33
LDHA-215ENST00000537296 KIAA1755Q5JYT7 1200 aa12.97□□□□□ -0.33
LDHA-215ENST00000537296 GIMAP6Q6P9H5 292 aa12.97□□□□□ -0.33
LDHA-215ENST00000537296 FBXO46Q6PJ61 603 aaPredicted RBP12.97□□□□□ -0.33
LDHA-215ENST00000537296 POTEEQ6S8J3 1075 aa12.97□□□□□ -0.33
LDHA-215ENST00000537296 AMOTL1Q8IY63 956 aa12.97□□□□□ -0.33
LDHA-215ENST00000537296 SMCR8Q8TEV9 937 aaPredicted RBP12.97□□□□□ -0.33
LDHA-215ENST00000537296 TRIM47Q96LD4 638 aa12.97□□□□□ -0.33
LDHA-215ENST00000537296 FEZ1Q99689 392 aa12.97□□□□□ -0.33
LDHA-215ENST00000537296 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.97□□□□□ -0.33
LDHA-215ENST00000537296 TMOD4Q9NZQ9 345 aa12.97□□□□□ -0.33
LDHA-215ENST00000537296 C19orf81C9J6K1 198 aa12.96□□□□□ -0.33
LDHA-215ENST00000537296 PRDM1O75626 825 aa12.96□□□□□ -0.33
LDHA-215ENST00000537296 GSPT1P15170 499 aaKnown RBP12.96□□□□□ -0.33
LDHA-215ENST00000537296 SDSP20132 328 aa12.96□□□□□ -0.33
LDHA-215ENST00000537296 RASA1P20936 1047 aa12.96□□□□□ -0.33
LDHA-215ENST00000537296 ANKRD13CQ8N6S4 541 aa12.96□□□□□ -0.33
LDHA-215ENST00000537296 KIAA1683Q9H0B3 1180 aa12.96□□□□□ -0.33
LDHA-215ENST00000537296 PTPN22Q9Y2R2 807 aa12.96□□□□□ -0.33
LDHA-215ENST00000537296 TACC3Q9Y6A5 838 aa12.96□□□□□ -0.33
LDHA-215ENST00000537296 RLFQ13129 1914 aa12.96□□□□□ -0.34
LDHA-215ENST00000537296 PSMC4P43686 418 aa12.95□□□□□ -0.34
LDHA-215ENST00000537296 PKN2Q16513 984 aaKnown RBP12.95□□□□□ -0.34
LDHA-215ENST00000537296 USP17L2Q6R6M4 530 aa12.95□□□□□ -0.34
LDHA-215ENST00000537296 TMEM179Q6ZVK1 233 aa12.95□□□□□ -0.34
LDHA-215ENST00000537296 P2RX7Q99572 595 aaKnown RBP12.95□□□□□ -0.34
LDHA-215ENST00000537296 INCENPQ9NQS7 918 aa12.95□□□□□ -0.34
LDHA-215ENST00000537296 HELLSQ9NRZ9 838 aa12.95□□□□□ -0.34
LDHA-215ENST00000537296 PARP14Q460N5 1801 aa12.95□□□□□ -0.34
LDHA-215ENST00000537296 MYH4Q9Y623 1939 aa12.95□□□□□ -0.34
LDHA-215ENST00000537296 VCAM1P19320 739 aa12.94□□□□□ -0.34
LDHA-215ENST00000537296 OSBPP22059 807 aa12.94□□□□□ -0.34
LDHA-215ENST00000537296 HOXA7P31268 230 aaPredicted RBP12.94□□□□□ -0.34
LDHA-215ENST00000537296 ICA1Q05084 483 aa12.94□□□□□ -0.34
LDHA-215ENST00000537296 MCMDC2Q4G0Z9 681 aa12.94□□□□□ -0.34
LDHA-215ENST00000537296 TTC22Q5TAA0 569 aa12.94□□□□□ -0.34
LDHA-215ENST00000537296 C12orf42Q96LP6 360 aa12.94□□□□□ -0.34
LDHA-215ENST00000537296 NAPBQ9H115 298 aa12.94□□□□□ -0.34
LDHA-215ENST00000537296 IL25Q9H293 177 aa12.94□□□□□ -0.34
LDHA-215ENST00000537296 TXNRD2Q9NNW7 524 aa12.94□□□□□ -0.34
LDHA-215ENST00000537296 PNMA3Q9UL41 463 aa12.94□□□□□ -0.34
LDHA-215ENST00000537296 PTCH2Q9Y6C5 1203 aa12.94□□□□□ -0.34
LDHA-215ENST00000537296 HERVK_113P62684 666 aa12.93□□□□□ -0.34
LDHA-215ENST00000537296 IRX3P78415 501 aaPredicted RBP12.93□□□□□ -0.34
LDHA-215ENST00000537296 CTDSPL2Q05D32 466 aa12.93□□□□□ -0.34
LDHA-215ENST00000537296 PPARAQ07869 468 aa12.93□□□□□ -0.34
LDHA-215ENST00000537296 CWC27Q6UX04 472 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 417.4 ms