RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 A0A1W2PQD8 194 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 PTPDC1A2A3K4 754 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 E7EWF7 191 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 EYA2O00167 538 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 RNF113AO15541 343 aaKnown RBP6.68□□□□□ -1.34
VPS33A-203ENST00000536212 PTCD1O75127 700 aaKnown RBP6.68□□□□□ -1.34
VPS33A-203ENST00000536212 ARHGEF15O94989 841 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 CHGBP05060 677 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 SLURP2P0DP57 97 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 HSPD1P10809 573 aaKnown RBP6.68□□□□□ -1.34
VPS33A-203ENST00000536212 PDIA3P30101 505 aaKnown RBP6.68□□□□□ -1.34
VPS33A-203ENST00000536212 ATP1A2P50993 1020 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 CABP4P57796 275 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 RBM6P78332 1123 aaKnown RBP6.68□□□□□ -1.34
VPS33A-203ENST00000536212 PTK7Q13308 1070 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 SNW1Q13573 536 aaKnown RBP6.68□□□□□ -1.34
VPS33A-203ENST00000536212 STX1AQ16623 288 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 OXLD1Q5BKU9 147 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 TMEM164Q5U3C3 297 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 DDX46Q7L014 1031 aaKnown RBP6.68□□□□□ -1.34
VPS33A-203ENST00000536212 CCDC125Q86Z20 511 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 CCAR1Q8IX12 1150 aaKnown RBP6.68□□□□□ -1.34
VPS33A-203ENST00000536212 CCDC191Q8NCU4 936 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 JARID2Q92833 1246 aaPredicted RBP6.68□□□□□ -1.34
VPS33A-203ENST00000536212 CCDC85AQ96PX6 553 aaPredicted RBP6.68□□□□□ -1.34
VPS33A-203ENST00000536212 USP28Q96RU2 1077 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 DNAJC2Q99543 621 aaKnown RBP6.68□□□□□ -1.34
VPS33A-203ENST00000536212 KRTAP4-8Q9BYQ9 185 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 TRIM5Q9C035 493 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 DNAJC25Q9H1X3 360 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 GOLPH3LQ9H4A5 285 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 PAG1Q9NWQ8 432 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 CWC25Q9NXE8 425 aaPredicted RBP6.68□□□□□ -1.34
VPS33A-203ENST00000536212 RTEL1Q9NZ71 1219 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 CHMP3Q9Y3E7 222 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 SPEF2Q9C093 1822 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 MAST3O60307 1309 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 ABCC12Q96J65 1359 aa6.68□□□□□ -1.34
VPS33A-203ENST00000536212 ARFGEF2Q9Y6D5 1785 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 SMTNL1A8MU46 457 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 GOLIM4O00461 696 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 UPP2O95045 317 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 ZFYP08048 801 aaPredicted RBP6.67□□□□□ -1.34
VPS33A-203ENST00000536212 BMP2P12643 396 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 APOBRQ0VD83 1088 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 CHAF1AQ13111 956 aaPredicted RBP6.67□□□□□ -1.34
VPS33A-203ENST00000536212 TRIM28Q13263 835 aaKnown RBP6.67□□□□□ -1.34
VPS33A-203ENST00000536212 NR5A1Q13285 461 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 C11orf57Q6ZUT1 292 aaPredicted RBP6.67□□□□□ -1.34
VPS33A-203ENST00000536212 ANKMY2Q8IV38 441 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 SEPT12Q8IYM1 358 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 LINC00528Q8N1L1 170 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 OGFOD1Q8N543 542 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 CACTINQ8WUQ7 758 aaKnown RBP6.67□□□□□ -1.34
VPS33A-203ENST00000536212 DDX11Q96FC9 970 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 ISCA1Q9BUE6 129 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 PLA2G12BQ9BX93 195 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 COL25A1Q9BXS0 654 aaPredicted RBP6.67□□□□□ -1.34
VPS33A-203ENST00000536212 ANO10Q9NW15 660 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 NRBP1Q9UHY1 535 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 CTNNA3Q9UI47 895 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 PAXBP1Q9Y5B6 917 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 WDR19Q8NEZ3 1342 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 RGPD5Q99666 1765 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 TNS2Q63HR2 1409 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 TNS3Q68CZ2 1445 aa6.67□□□□□ -1.34
VPS33A-203ENST00000536212 A0A0U1RQG5 324 aaPredicted RBP6.66□□□□□ -1.34
VPS33A-203ENST00000536212 RBM47A0AV96 593 aaKnown RBP6.66□□□□□ -1.34
VPS33A-203ENST00000536212 ERVV-2B6SEH9 535 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 M0R2C6 588 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 FOXP2O15409 715 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 YEATS4O95619 227 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 IFIT1P09914 478 aaKnown RBP6.66□□□□□ -1.34
VPS33A-203ENST00000536212 FDPSP14324 419 aaKnown RBP6.66□□□□□ -1.34
VPS33A-203ENST00000536212 PIP4K2AP48426 406 aaPredicted RBP6.66□□□□□ -1.34
VPS33A-203ENST00000536212 TIMM10P62072 90 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 FAM160A1Q05DH4 1040 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 LRMPQ12912 555 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 LRRFIP1Q32MZ4 808 aaKnown RBP6.66□□□□□ -1.34
VPS33A-203ENST00000536212 CCDC144BQ3MJ40 725 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 ADALQ6DHV7 355 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 CCDC73Q6ZRK6 1079 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 TTLL7Q6ZT98 887 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 LRRC8AQ8IWT6 810 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 DHX40Q8IX18 779 aaKnown RBP6.66□□□□□ -1.34
VPS33A-203ENST00000536212 CCDC144CPQ8IYA2 1237 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 FMR1NBQ8N0W7 255 aaPredicted RBP6.66□□□□□ -1.34
VPS33A-203ENST00000536212 FAM177A1Q8N128 213 aaPredicted RBP6.66□□□□□ -1.34
VPS33A-203ENST00000536212 MEIOBQ8N635 442 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 LINC00301Q8NCQ3 95 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 OSBP2Q969R2 916 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 ZNF594Q96JF6 807 aaPredicted RBP6.66□□□□□ -1.34
VPS33A-203ENST00000536212 BPIFA3Q9BQP9 254 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 CDCA7Q9BWT1 371 aaPredicted RBP6.66□□□□□ -1.34
VPS33A-203ENST00000536212 LRRC2Q9BYS8 371 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 OSBPL5Q9H0X9 879 aaPredicted RBP6.66□□□□□ -1.34
VPS33A-203ENST00000536212 DNAAF2Q9NVR5 837 aaKnown RBP6.66□□□□□ -1.34
VPS33A-203ENST00000536212 CLIP2Q9UDT6 1046 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 PRDM4Q9UKN5 801 aa6.66□□□□□ -1.34
VPS33A-203ENST00000536212 SPATA31A3Q5VYP0 1347 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms