RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 PNMA3Q9UL41 463 aa26.49■■□□□ 1.83
VPS37C-202ENST00000535818 SLC3A2P08195 630 aaKnown RBP26.48■■□□□ 1.83
VPS37C-202ENST00000535818 CYP2C8P10632 490 aa26.48■■□□□ 1.83
VPS37C-202ENST00000535818 GUCY1A2P33402 732 aa26.48■■□□□ 1.83
VPS37C-202ENST00000535818 ZYXQ15942 572 aaKnown RBP26.48■■□□□ 1.83
VPS37C-202ENST00000535818 CTU1Q7Z7A3 348 aaKnown RBP26.48■■□□□ 1.83
VPS37C-202ENST00000535818 ZNF589Q86UQ0 364 aaPredicted RBP26.48■■□□□ 1.83
VPS37C-202ENST00000535818 ZNF287Q9HBT7 754 aa26.48■■□□□ 1.83
VPS37C-202ENST00000535818 PPARAQ07869 468 aa26.47■■□□□ 1.83
VPS37C-202ENST00000535818 USP17L2Q6R6M4 530 aa26.47■■□□□ 1.83
VPS37C-202ENST00000535818 SMCR8Q8TEV9 937 aaPredicted RBP26.47■■□□□ 1.83
VPS37C-202ENST00000535818 FOXP2O15409 715 aa26.46■■□□□ 1.83
VPS37C-202ENST00000535818 USP14P54578 494 aa26.46■■□□□ 1.83
VPS37C-202ENST00000535818 CD99L2Q8TCZ2 262 aa26.46■■□□□ 1.83
VPS37C-202ENST00000535818 CPA4Q9UI42 421 aa26.46■■□□□ 1.83
VPS37C-202ENST00000535818 OSBPP22059 807 aa26.45■■□□□ 1.82
VPS37C-202ENST00000535818 ICA1Q05084 483 aa26.45■■□□□ 1.82
VPS37C-202ENST00000535818 PDE4BQ07343 736 aa26.45■■□□□ 1.82
VPS37C-202ENST00000535818 ACER1Q8TDN7 264 aa26.45■■□□□ 1.82
VPS37C-202ENST00000535818 MCOLN1Q9GZU1 580 aa26.45■■□□□ 1.82
VPS37C-202ENST00000535818 HSPD1P10809 573 aaKnown RBP26.44■■□□□ 1.82
VPS37C-202ENST00000535818 RASA1P20936 1047 aa26.44■■□□□ 1.82
VPS37C-202ENST00000535818 KIAA1683Q9H0B3 1180 aa26.44■■□□□ 1.82
VPS37C-202ENST00000535818 ARHGEF10LQ9HCE6 1279 aa26.44■■□□□ 1.82
VPS37C-202ENST00000535818 ADGRA2Q96PE1 1338 aa26.43■■□□□ 1.82
VPS37C-202ENST00000535818 PRDM1O75626 825 aa26.43■■□□□ 1.82
VPS37C-202ENST00000535818 IRX3P78415 501 aaPredicted RBP26.43■■□□□ 1.82
VPS37C-202ENST00000535818 KIF22Q14807 665 aa26.43■■□□□ 1.82
VPS37C-202ENST00000535818 ALX1Q15699 326 aa26.43■■□□□ 1.82
VPS37C-202ENST00000535818 C17orf99Q6UX52 265 aa26.43■■□□□ 1.82
VPS37C-202ENST00000535818 ZNF444Q8N0Y2 327 aaPredicted RBP26.43■■□□□ 1.82
VPS37C-202ENST00000535818 EMILIN3Q9NT22 766 aa26.43■■□□□ 1.82
VPS37C-202ENST00000535818 ATP2B2Q01814 1243 aa26.42■■□□□ 1.82
VPS37C-202ENST00000535818 CLEC10AQ8IUN9 316 aa26.42■■□□□ 1.82
VPS37C-202ENST00000535818 SH2D4AQ9H788 454 aa26.42■■□□□ 1.82
VPS37C-202ENST00000535818 TRIM17Q9Y577 477 aa26.42■■□□□ 1.82
VPS37C-202ENST00000535818 CTDSPL2Q05D32 466 aa26.41■■□□□ 1.82
VPS37C-202ENST00000535818 ARHGEF6Q15052 776 aa26.41■■□□□ 1.82
VPS37C-202ENST00000535818 C12orf42Q96LP6 360 aa26.41■■□□□ 1.82
VPS37C-202ENST00000535818 ASCC2Q9H1I8 757 aaPredicted RBP26.41■■□□□ 1.82
VPS37C-202ENST00000535818 KANSL2Q9H9L4 492 aa26.41■■□□□ 1.82
VPS37C-202ENST00000535818 FGAP02671 866 aa26.4■■□□□ 1.82
VPS37C-202ENST00000535818 RUFY2Q8WXA3 655 aa26.4■■□□□ 1.82
VPS37C-202ENST00000535818 EFCC1Q9HA90 598 aa26.4■■□□□ 1.82
VPS37C-202ENST00000535818 ZMYM6O95789 1325 aa26.39■■□□□ 1.82
VPS37C-202ENST00000535818 A0A1W2PRG0 241 aa26.39■■□□□ 1.82
VPS37C-202ENST00000535818 ECM2O94769 699 aaPredicted RBP26.39■■□□□ 1.82
VPS37C-202ENST00000535818 HOXA7P31268 230 aaPredicted RBP26.39■■□□□ 1.82
VPS37C-202ENST00000535818 LACTBP83111 547 aaPredicted RBP26.39■■□□□ 1.82
VPS37C-202ENST00000535818 PKN2Q16513 984 aaKnown RBP26.39■■□□□ 1.82
VPS37C-202ENST00000535818 SKAP1Q86WV1 359 aa26.39■■□□□ 1.82
VPS37C-202ENST00000535818 TSPY3P0CV98 308 aa26.38■■□□□ 1.81
VPS37C-202ENST00000535818 TSPY8P0CW00 308 aa26.38■■□□□ 1.81
VPS37C-202ENST00000535818 BCRP11274 1271 aa26.38■■□□□ 1.81
VPS37C-202ENST00000535818 VCAM1P19320 739 aa26.38■■□□□ 1.81
VPS37C-202ENST00000535818 OTOP1Q7RTM1 612 aa26.38■■□□□ 1.81
VPS37C-202ENST00000535818 ANAPC4Q9UJX5 808 aa26.38■■□□□ 1.81
VPS37C-202ENST00000535818 RAD50Q92878 1312 aa26.38■■□□□ 1.81
VPS37C-202ENST00000535818 EEF2P13639 858 aaKnown RBP26.37■■□□□ 1.81
VPS37C-202ENST00000535818 GCLCP48506 637 aaPredicted RBP26.37■■□□□ 1.81
VPS37C-202ENST00000535818 ANKRD13CQ8N6S4 541 aa26.37■■□□□ 1.81
VPS37C-202ENST00000535818 TMX2Q9Y320 296 aa26.37■■□□□ 1.81
VPS37C-202ENST00000535818 GREB1LQ9C091 1923 aaPredicted RBP26.37■■□□□ 1.81
VPS37C-202ENST00000535818 USP17L15C9J2P7 530 aa26.36■■□□□ 1.81
VPS37C-202ENST00000535818 USP17L13C9JLJ4 530 aa26.36■■□□□ 1.81
VPS37C-202ENST00000535818 USP17L11C9JVI0 530 aa26.36■■□□□ 1.81
VPS37C-202ENST00000535818 USP17L18D6R9N7 530 aa26.36■■□□□ 1.81
VPS37C-202ENST00000535818 USP17L22D6RA61 530 aa26.36■■□□□ 1.81
VPS37C-202ENST00000535818 USP17L17D6RBQ6 530 aa26.36■■□□□ 1.81
VPS37C-202ENST00000535818 USP17L19D6RCP7 530 aa26.36■■□□□ 1.81
VPS37C-202ENST00000535818 USP17L20D6RJB6 530 aa26.36■■□□□ 1.81
VPS37C-202ENST00000535818 CHMLP26374 656 aa26.36■■□□□ 1.81
VPS37C-202ENST00000535818 HAND2P61296 217 aa26.36■■□□□ 1.81
VPS37C-202ENST00000535818 USP17L24Q0WX57 530 aa26.36■■□□□ 1.81
VPS37C-202ENST00000535818 ABHD8Q96I13 439 aa26.36■■□□□ 1.81
VPS37C-202ENST00000535818 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.36■■□□□ 1.81
VPS37C-202ENST00000535818 TOMM22Q9NS69 142 aa26.36■■□□□ 1.81
VPS37C-202ENST00000535818 RAD21O60216 631 aa26.35■■□□□ 1.81
VPS37C-202ENST00000535818 TFAP4Q01664 338 aa26.35■■□□□ 1.81
VPS37C-202ENST00000535818 FAM47AQ5JRC9 791 aa26.35■■□□□ 1.81
VPS37C-202ENST00000535818 SIAH1Q8IUQ4 282 aa26.35■■□□□ 1.81
VPS37C-202ENST00000535818 P2RX7Q99572 595 aaKnown RBP26.35■■□□□ 1.81
VPS37C-202ENST00000535818 DSCC1Q9BVC3 393 aa26.35■■□□□ 1.81
VPS37C-202ENST00000535818 ARHGAP39Q9C0H5 1083 aa26.35■■□□□ 1.81
VPS37C-202ENST00000535818 RPAP3Q9H6T3 665 aaPredicted RBP26.35■■□□□ 1.81
VPS37C-202ENST00000535818 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.35■■□□□ 1.81
VPS37C-202ENST00000535818 TSPY2A6NKD2 308 aa26.34■■□□□ 1.81
VPS37C-202ENST00000535818 PSMC4P43686 418 aa26.34■■□□□ 1.81
VPS37C-202ENST00000535818 HERVK_113P62684 666 aa26.34■■□□□ 1.81
VPS37C-202ENST00000535818 FBXO46Q6PJ61 603 aaPredicted RBP26.34■■□□□ 1.81
VPS37C-202ENST00000535818 LPAR1Q92633 364 aa26.34■■□□□ 1.81
VPS37C-202ENST00000535818 VCPKMTQ9H867 229 aa26.34■■□□□ 1.81
VPS37C-202ENST00000535818 GOPCQ9HD26 462 aa26.34■■□□□ 1.81
VPS37C-202ENST00000535818 ZSWIM8A7E2V4 1837 aa26.34■■□□□ 1.81
VPS37C-202ENST00000535818 PLIN4Q96Q06 1357 aa26.33■■□□□ 1.81
VPS37C-202ENST00000535818 RANBP6O60518 1105 aaKnown RBP26.33■■□□□ 1.81
VPS37C-202ENST00000535818 FMNL1O95466 1100 aaPredicted RBP26.33■■□□□ 1.81
VPS37C-202ENST00000535818 CAP1Q01518 475 aa26.33■■□□□ 1.81
VPS37C-202ENST00000535818 FAM110CQ1W6H9 321 aa26.33■■□□□ 1.81
VPS37C-202ENST00000535818 RRP12Q5JTH9 1297 aaKnown RBP26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms