RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 CACNA1FO60840 1977 aa17.95■□□□□ 0.46
MCF2L-232ENST00000535094 NRXN3Q9Y4C0 1643 aa17.95■□□□□ 0.46
MCF2L-232ENST00000535094 ABL1P00519 1130 aa17.95■□□□□ 0.46
MCF2L-232ENST00000535094 STAT6P42226 847 aa17.94■□□□□ 0.46
MCF2L-232ENST00000535094 MTIF2P46199 727 aaKnown RBP17.94■□□□□ 0.46
MCF2L-232ENST00000535094 GTF2A1P52655 376 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-232ENST00000535094 IQCA1Q86XH1 822 aa17.94■□□□□ 0.46
MCF2L-232ENST00000535094 CTCFLQ8NI51 663 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-232ENST00000535094 NELFBQ8WX92 580 aa17.94■□□□□ 0.46
MCF2L-232ENST00000535094 EXOC4Q96A65 974 aa17.94■□□□□ 0.46
MCF2L-232ENST00000535094 CASP7P55210 303 aa17.94■□□□□ 0.46
MCF2L-232ENST00000535094 PTGDRQ13258 359 aa17.94■□□□□ 0.46
MCF2L-232ENST00000535094 CCDC96Q2M329 555 aa17.94■□□□□ 0.46
MCF2L-232ENST00000535094 FOXR1Q6PIV2 292 aa17.94■□□□□ 0.46
MCF2L-232ENST00000535094 MAP3K14Q99558 947 aa17.94■□□□□ 0.46
MCF2L-232ENST00000535094 PATL2C9JE40 543 aaKnown RBP17.94■□□□□ 0.46
MCF2L-232ENST00000535094 ATP8B1O43520 1251 aa17.94■□□□□ 0.46
MCF2L-232ENST00000535094 BCAMP50895 628 aa17.94■□□□□ 0.46
MCF2L-232ENST00000535094 CYP26C1Q6V0L0 522 aa17.94■□□□□ 0.46
MCF2L-232ENST00000535094 TMTC1Q8IUR5 882 aa17.94■□□□□ 0.46
MCF2L-232ENST00000535094 SPATA5Q8NB90 893 aa17.94■□□□□ 0.46
MCF2L-232ENST00000535094 NOC3LQ8WTT2 800 aaKnown RBP17.94■□□□□ 0.46
MCF2L-232ENST00000535094 TANGO6Q9C0B7 1094 aa17.94■□□□□ 0.46
MCF2L-232ENST00000535094 NCAPD2Q15021 1401 aa17.94■□□□□ 0.46
MCF2L-232ENST00000535094 CIAO1O76071 339 aa17.93■□□□□ 0.46
MCF2L-232ENST00000535094 FMNL1O95466 1100 aaPredicted RBP17.93■□□□□ 0.46
MCF2L-232ENST00000535094 STIM1Q13586 685 aa17.93■□□□□ 0.46
MCF2L-232ENST00000535094 MAP9Q49MG5 647 aa17.93■□□□□ 0.46
MCF2L-232ENST00000535094 IQUBQ8NA54 791 aa17.93■□□□□ 0.46
MCF2L-232ENST00000535094 RFX7Q2KHR2 1363 aa17.93■□□□□ 0.46
MCF2L-232ENST00000535094 MFAP3LO75121 409 aa17.93■□□□□ 0.46
MCF2L-232ENST00000535094 TOB1P50616 345 aaPredicted RBP17.93■□□□□ 0.46
MCF2L-232ENST00000535094 TTC31Q49AM3 519 aaPredicted RBP17.93■□□□□ 0.46
MCF2L-232ENST00000535094 IGDCC4Q8TDY8 1250 aa17.93■□□□□ 0.46
MCF2L-232ENST00000535094 ESR2Q92731 530 aa17.93■□□□□ 0.46
MCF2L-232ENST00000535094 STRBPQ96SI9 672 aaKnown RBP17.93■□□□□ 0.46
MCF2L-232ENST00000535094 CHP1Q99653 195 aa17.93■□□□□ 0.46
MCF2L-232ENST00000535094 RNF41Q9H4P4 317 aaPredicted RBP17.93■□□□□ 0.46
MCF2L-232ENST00000535094 SEC31BQ9NQW1 1179 aa17.93■□□□□ 0.46
MCF2L-232ENST00000535094 FBXO2Q9UK22 296 aaPredicted RBP17.93■□□□□ 0.46
MCF2L-232ENST00000535094 UQCRFS1P1P0C7P4 283 aa17.93■□□□□ 0.46
MCF2L-232ENST00000535094 CCDC178Q5BJE1 867 aa17.93■□□□□ 0.46
MCF2L-232ENST00000535094 TTC38Q5R3I4 469 aa17.93■□□□□ 0.46
MCF2L-232ENST00000535094 BICDL1Q6ZP65 573 aa17.93■□□□□ 0.46
MCF2L-232ENST00000535094 LCORLQ8N3X6 602 aa17.93■□□□□ 0.46
MCF2L-232ENST00000535094 PAGE5Q96GU1 130 aa17.93■□□□□ 0.46
MCF2L-232ENST00000535094 POLD4Q9HCU8 107 aa17.93■□□□□ 0.46
MCF2L-232ENST00000535094 ASAP1Q9ULH1 1129 aa17.93■□□□□ 0.46
MCF2L-232ENST00000535094 IFNAR1P17181 557 aa17.92■□□□□ 0.46
MCF2L-232ENST00000535094 UBA7P41226 1012 aa17.92■□□□□ 0.46
MCF2L-232ENST00000535094 PAK1Q13153 545 aa17.92■□□□□ 0.46
MCF2L-232ENST00000535094 HLFQ16534 295 aa17.92■□□□□ 0.46
MCF2L-232ENST00000535094 AFAP1L1Q8TED9 768 aa17.92■□□□□ 0.46
MCF2L-232ENST00000535094 KCNJ18B7U540 433 aa17.92■□□□□ 0.46
MCF2L-232ENST00000535094 ZPR1O75312 459 aa17.92■□□□□ 0.46
MCF2L-232ENST00000535094 CD44P16070 742 aaKnown RBP17.92■□□□□ 0.46
MCF2L-232ENST00000535094 RNASE9P60153 205 aaKnown RBP17.92■□□□□ 0.46
MCF2L-232ENST00000535094 MORC3Q14149 939 aa17.92■□□□□ 0.46
MCF2L-232ENST00000535094 KCNJ12Q14500 433 aa17.92■□□□□ 0.46
MCF2L-232ENST00000535094 KRT31Q15323 416 aa17.92■□□□□ 0.46
MCF2L-232ENST00000535094 GDAQ9Y2T3 454 aa17.92■□□□□ 0.46
MCF2L-232ENST00000535094 TNKSO95271 1327 aa17.92■□□□□ 0.46
MCF2L-232ENST00000535094 RNF40O75150 1001 aa17.92■□□□□ 0.46
MCF2L-232ENST00000535094 IDEP14735 1019 aa17.92■□□□□ 0.46
MCF2L-232ENST00000535094 CYP27A1Q02318 531 aa17.92■□□□□ 0.46
MCF2L-232ENST00000535094 EPN1Q9Y6I3 576 aaPredicted RBP17.92■□□□□ 0.46
MCF2L-232ENST00000535094 RGPD8O14715 1765 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-232ENST00000535094 FOXP2O15409 715 aa17.91■□□□□ 0.46
MCF2L-232ENST00000535094 NR1I3Q14994 352 aa17.91■□□□□ 0.46
MCF2L-232ENST00000535094 SPA17Q15506 151 aa17.91■□□□□ 0.46
MCF2L-232ENST00000535094 SRPRBQ9Y5M8 271 aaKnown RBP17.91■□□□□ 0.46
MCF2L-232ENST00000535094 ZEB2O60315 1214 aa17.91■□□□□ 0.46
MCF2L-232ENST00000535094 MARCH6O60337 910 aa17.91■□□□□ 0.46
MCF2L-232ENST00000535094 CRACR2BQ8N4Y2 399 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-232ENST00000535094 TTLL11Q8NHH1 800 aa17.91■□□□□ 0.46
MCF2L-232ENST00000535094 TRIM49BA6NDI0 452 aa17.91■□□□□ 0.46
MCF2L-232ENST00000535094 PDE8BO95263 885 aa17.91■□□□□ 0.46
MCF2L-232ENST00000535094 TMEM139Q8IV31 216 aa17.91■□□□□ 0.46
MCF2L-232ENST00000535094 ANKRD13CQ8N6S4 541 aa17.91■□□□□ 0.46
MCF2L-232ENST00000535094 ERCC5P28715 1186 aaPredicted RBP17.9■□□□□ 0.46
MCF2L-232ENST00000535094 COPB1P53618 953 aaKnown RBP17.9■□□□□ 0.46
MCF2L-232ENST00000535094 FAM47AQ5JRC9 791 aa17.9■□□□□ 0.46
MCF2L-232ENST00000535094 RASGRP4Q8TDF6 673 aa17.9■□□□□ 0.46
MCF2L-232ENST00000535094 CCDC47Q96A33 483 aaKnown RBP17.9■□□□□ 0.46
MCF2L-232ENST00000535094 KIFC2Q96AC6 838 aa17.9■□□□□ 0.46
MCF2L-232ENST00000535094 PANX2Q96RD6 677 aa17.9■□□□□ 0.46
MCF2L-232ENST00000535094 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.9■□□□□ 0.46
MCF2L-232ENST00000535094 JCADQ9P266 1359 aa17.9■□□□□ 0.46
MCF2L-232ENST00000535094 RSRC2Q7L4I2 434 aaKnown RBP17.9■□□□□ 0.46
MCF2L-232ENST00000535094 FAM170AA1A519 330 aa17.9■□□□□ 0.46
MCF2L-232ENST00000535094 PLEKHA8P1O95397 391 aa17.9■□□□□ 0.46
MCF2L-232ENST00000535094 IGHMBP2P38935 993 aaKnown RBP17.9■□□□□ 0.46
MCF2L-232ENST00000535094 KCND1Q9NSA2 647 aa17.9■□□□□ 0.46
MCF2L-232ENST00000535094 SAR1BQ9Y6B6 198 aa17.9■□□□□ 0.46
MCF2L-232ENST00000535094 MYO1BO43795 1136 aa17.89■□□□□ 0.46
MCF2L-232ENST00000535094 SND1Q7KZF4 910 aaKnown RBP eCLIP17.89■□□□□ 0.46
MCF2L-232ENST00000535094 HEG1Q9ULI3 1381 aa17.89■□□□□ 0.45
MCF2L-232ENST00000535094 CUL4BQ13620 913 aa17.89■□□□□ 0.45
MCF2L-232ENST00000535094 UBE3CQ15386 1083 aa17.89■□□□□ 0.45
MCF2L-232ENST00000535094 TMTC2Q8N394 836 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms