RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 CDKL5O76039 1030 aa23.7■■□□□ 1.38
TNFRSF1A-205ENST00000534885 CCDC178Q5BJE1 867 aa23.7■■□□□ 1.38
TNFRSF1A-205ENST00000534885 CNOT7Q9UIV1 285 aaKnown RBP23.7■■□□□ 1.38
TNFRSF1A-205ENST00000534885 MYO1BO43795 1136 aa23.69■■□□□ 1.38
TNFRSF1A-205ENST00000534885 SAMD7Q7Z3H4 446 aa23.69■■□□□ 1.38
TNFRSF1A-205ENST00000534885 CSRNP1Q96S65 589 aa23.69■■□□□ 1.38
TNFRSF1A-205ENST00000534885 CCDC196A0A1B0GTZ2 297 aa23.69■■□□□ 1.38
TNFRSF1A-205ENST00000534885 PDIA4P13667 645 aaKnown RBP23.69■■□□□ 1.38
TNFRSF1A-205ENST00000534885 IFNAR1P17181 557 aa23.69■■□□□ 1.38
TNFRSF1A-205ENST00000534885 FERMT3Q86UX7 667 aa23.69■■□□□ 1.38
TNFRSF1A-205ENST00000534885 CCDC82Q8N4S0 544 aa23.69■■□□□ 1.38
TNFRSF1A-205ENST00000534885 PNMA1Q8ND90 353 aa23.69■■□□□ 1.38
TNFRSF1A-205ENST00000534885 FAM151AQ8WW52 585 aa23.69■■□□□ 1.38
TNFRSF1A-205ENST00000534885 TCHHQ07283 1943 aa23.68■■□□□ 1.38
TNFRSF1A-205ENST00000534885 UBE2Q2LH0YL09 131 aa23.68■■□□□ 1.38
TNFRSF1A-205ENST00000534885 CALM1P0DP23 149 aa23.68■■□□□ 1.38
TNFRSF1A-205ENST00000534885 CALM2P0DP24 149 aa23.68■■□□□ 1.38
TNFRSF1A-205ENST00000534885 CALM3P0DP25 149 aa23.68■■□□□ 1.38
TNFRSF1A-205ENST00000534885 DEKP35659 375 aaKnown RBP23.68■■□□□ 1.38
TNFRSF1A-205ENST00000534885 MMP14P50281 582 aa23.68■■□□□ 1.38
TNFRSF1A-205ENST00000534885 FKBP1CQ5VVH2 108 aa23.68■■□□□ 1.38
TNFRSF1A-205ENST00000534885 TMEM47Q9BQJ4 181 aa23.68■■□□□ 1.38
TNFRSF1A-205ENST00000534885 GREB1LQ9C091 1923 aaPredicted RBP23.68■■□□□ 1.38
TNFRSF1A-205ENST00000534885 H3BQV1 296 aa23.68■■□□□ 1.38
TNFRSF1A-205ENST00000534885 TBC1D10BQ4KMP7 808 aaPredicted RBP23.68■■□□□ 1.38
TNFRSF1A-205ENST00000534885 IFFO2Q5TF58 517 aa23.68■■□□□ 1.38
TNFRSF1A-205ENST00000534885 MCTP1Q6DN14 999 aa23.68■■□□□ 1.38
TNFRSF1A-205ENST00000534885 FOXP4Q8IVH2 680 aaPredicted RBP23.68■■□□□ 1.38
TNFRSF1A-205ENST00000534885 PPP2R5BQ15173 497 aa23.67■■□□□ 1.38
TNFRSF1A-205ENST00000534885 NBPF11Q86T75 865 aa23.67■■□□□ 1.38
TNFRSF1A-205ENST00000534885 METTL16Q86W50 562 aaKnown RBP23.67■■□□□ 1.38
TNFRSF1A-205ENST00000534885 CLEC10AQ8IUN9 316 aa23.67■■□□□ 1.38
TNFRSF1A-205ENST00000534885 AIFM3Q96NN9 605 aa23.67■■□□□ 1.38
TNFRSF1A-205ENST00000534885 SLC26A6Q9BXS9 759 aa23.67■■□□□ 1.38
TNFRSF1A-205ENST00000534885 TMEM39BQ9GZU3 492 aa23.67■■□□□ 1.38
TNFRSF1A-205ENST00000534885 SCAF8Q9UPN6 1271 aaKnown RBP23.67■■□□□ 1.38
TNFRSF1A-205ENST00000534885 PLEKHA8P1O95397 391 aa23.66■■□□□ 1.38
TNFRSF1A-205ENST00000534885 GUCY1B3Q02153 619 aa23.66■■□□□ 1.38
TNFRSF1A-205ENST00000534885 SHROOM1Q2M3G4 852 aaPredicted RBP23.66■■□□□ 1.38
TNFRSF1A-205ENST00000534885 CDAN1Q8IWY9 1227 aa23.66■■□□□ 1.38
TNFRSF1A-205ENST00000534885 TRIM34Q9BYJ4 488 aa23.66■■□□□ 1.38
TNFRSF1A-205ENST00000534885 GJB4Q9NTQ9 266 aa23.66■■□□□ 1.38
TNFRSF1A-205ENST00000534885 RNF181Q9P0P0 153 aa23.66■■□□□ 1.38
TNFRSF1A-205ENST00000534885 IGKV6D-41A0A0C4DH26 115 aa23.66■■□□□ 1.38
TNFRSF1A-205ENST00000534885 FMNL1O95466 1100 aaPredicted RBP23.66■■□□□ 1.38
TNFRSF1A-205ENST00000534885 NOVP48745 357 aa23.66■■□□□ 1.38
TNFRSF1A-205ENST00000534885 MTMR4Q9NYA4 1195 aa23.66■■□□□ 1.38
TNFRSF1A-205ENST00000534885 ASTN2O75129 1339 aaPredicted RBP23.65■■□□□ 1.38
TNFRSF1A-205ENST00000534885 MPHOSPH10O00566 681 aaKnown RBP23.65■■□□□ 1.38
TNFRSF1A-205ENST00000534885 SSRP1Q08945 709 aaKnown RBP23.65■■□□□ 1.38
TNFRSF1A-205ENST00000534885 OTUD7BQ6GQQ9 843 aa23.65■■□□□ 1.38
TNFRSF1A-205ENST00000534885 TATDN1Q6P1N9 297 aa23.65■■□□□ 1.38
TNFRSF1A-205ENST00000534885 FAM83AQ86UY5 434 aa23.65■■□□□ 1.38
TNFRSF1A-205ENST00000534885 GPC2Q8N158 579 aa23.65■■□□□ 1.38
TNFRSF1A-205ENST00000534885 CTCFLQ8NI51 663 aaPredicted RBP23.65■■□□□ 1.38
TNFRSF1A-205ENST00000534885 RBM28Q9NW13 759 aaKnown RBP23.65■■□□□ 1.38
TNFRSF1A-205ENST00000534885 MYH6P13533 1939 aa23.65■■□□□ 1.38
TNFRSF1A-205ENST00000534885 STK36Q9NRP7 1315 aa23.64■■□□□ 1.38
TNFRSF1A-205ENST00000534885 DDX11L8A8MPP1 907 aa23.64■■□□□ 1.38
TNFRSF1A-205ENST00000534885 FUT2Q10981 343 aa23.64■■□□□ 1.38
TNFRSF1A-205ENST00000534885 MTMR7Q9Y216 660 aa23.64■■□□□ 1.38
TNFRSF1A-205ENST00000534885 KIF4BQ2VIQ3 1234 aa23.64■■□□□ 1.37
TNFRSF1A-205ENST00000534885 CERKLQ49MI3 558 aaPredicted RBP23.64■■□□□ 1.37
TNFRSF1A-205ENST00000534885 RASGRP2Q7LDG7 609 aa23.64■■□□□ 1.37
TNFRSF1A-205ENST00000534885 C8orf76Q96K31 380 aa23.64■■□□□ 1.37
TNFRSF1A-205ENST00000534885 CCDC17Q96LX7 622 aa23.64■■□□□ 1.37
TNFRSF1A-205ENST00000534885 ALG1Q9BT22 464 aa23.64■■□□□ 1.37
TNFRSF1A-205ENST00000534885 BAZ2BQ9UIF8 2168 aaKnown RBP23.64■■□□□ 1.37
TNFRSF1A-205ENST00000534885 GUCY1A2P33402 732 aa23.63■■□□□ 1.37
TNFRSF1A-205ENST00000534885 TMTC3Q6ZXV5 915 aa23.63■■□□□ 1.37
TNFRSF1A-205ENST00000534885 TAOK2Q9UL54 1235 aa23.63■■□□□ 1.37
TNFRSF1A-205ENST00000534885 TOP1P11387 765 aaKnown RBP23.63■■□□□ 1.37
TNFRSF1A-205ENST00000534885 FAM173BQ6P4H8 233 aa23.63■■□□□ 1.37
TNFRSF1A-205ENST00000534885 TRIM22Q8IYM9 498 aa23.63■■□□□ 1.37
TNFRSF1A-205ENST00000534885 GPRC5DQ9NZD1 345 aa23.63■■□□□ 1.37
TNFRSF1A-205ENST00000534885 FBXO18Q8NFZ0 1043 aa23.62■■□□□ 1.37
TNFRSF1A-205ENST00000534885 PGAP2Q9UHJ9 254 aa23.62■■□□□ 1.37
TNFRSF1A-205ENST00000534885 HERC5Q9UII4 1024 aaKnown RBP23.62■■□□□ 1.37
TNFRSF1A-205ENST00000534885 ATP6V1DQ9Y5K8 247 aa23.62■■□□□ 1.37
TNFRSF1A-205ENST00000534885 MYH4Q9Y623 1939 aa23.62■■□□□ 1.37
TNFRSF1A-205ENST00000534885 H7C1D1 291 aa23.61■■□□□ 1.37
TNFRSF1A-205ENST00000534885 GDF11O95390 407 aa23.61■■□□□ 1.37
TNFRSF1A-205ENST00000534885 RESTQ13127 1097 aa23.61■■□□□ 1.37
TNFRSF1A-205ENST00000534885 RRP1BQ14684 758 aaKnown RBP23.61■■□□□ 1.37
TNFRSF1A-205ENST00000534885 C9orf131Q5VYM1 1079 aa23.61■■□□□ 1.37
TNFRSF1A-205ENST00000534885 STAG2Q8N3U4 1231 aa23.61■■□□□ 1.37
TNFRSF1A-205ENST00000534885 SRBD1Q8N5C6 995 aaKnown RBP23.61■■□□□ 1.37
TNFRSF1A-205ENST00000534885 MAP3K14Q99558 947 aa23.61■■□□□ 1.37
TNFRSF1A-205ENST00000534885 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.61■■□□□ 1.372e-7■■■□□ 17.4
TNFRSF1A-205ENST00000534885 GOLGA6L22H0YM25 854 aa23.61■■□□□ 1.37
TNFRSF1A-205ENST00000534885 DDNO94850 711 aaPredicted RBP23.61■■□□□ 1.37
TNFRSF1A-205ENST00000534885 KIF5BP33176 963 aa23.61■■□□□ 1.37
TNFRSF1A-205ENST00000534885 RASA3Q14644 834 aa23.61■■□□□ 1.37
TNFRSF1A-205ENST00000534885 GRM4Q14833 912 aa23.61■■□□□ 1.37
TNFRSF1A-205ENST00000534885 LRRC47Q8N1G4 583 aaKnown RBP23.61■■□□□ 1.37
TNFRSF1A-205ENST00000534885 TRPM4Q8TD43 1214 aa23.61■■□□□ 1.37
TNFRSF1A-205ENST00000534885 RNF26Q9BY78 433 aaPredicted RBP23.61■■□□□ 1.37
TNFRSF1A-205ENST00000534885 MAD2L2Q9UI95 211 aa23.61■■□□□ 1.37
TNFRSF1A-205ENST00000534885 HACL1Q9UJ83 578 aa23.61■■□□□ 1.37
TNFRSF1A-205ENST00000534885 TTLL1O95922 423 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms