RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 RAPGEF4Q8WZA2 1011 aa7.14□□□□□ -1.27
ATM-224ENST00000534625 SYTL4Q96C24 671 aaPredicted RBP7.14□□□□□ -1.27
ATM-224ENST00000534625 NSD3Q9BZ95 1437 aa7.14□□□□□ -1.27
ATM-224ENST00000534625 ADAM19Q9H013 955 aa7.14□□□□□ -1.27
ATM-224ENST00000534625 POLIQ9UNA4 740 aa7.14□□□□□ -1.27
ATM-224ENST00000534625 KIF20BQ96Q89 1820 aa7.13□□□□□ -1.27
ATM-224ENST00000534625 MYOM1P52179 1685 aa7.13□□□□□ -1.27
ATM-224ENST00000534625 CYP27B1O15528 508 aa7.13□□□□□ -1.27
ATM-224ENST00000534625 FZD6O60353 706 aa7.13□□□□□ -1.27
ATM-224ENST00000534625 TRPA1O75762 1119 aa7.13□□□□□ -1.27
ATM-224ENST00000534625 YY1P25490 414 aa7.13□□□□□ -1.27
ATM-224ENST00000534625 CDC25BP30305 580 aa7.13□□□□□ -1.27
ATM-224ENST00000534625 C8orf34Q49A92 452 aa7.13□□□□□ -1.27
ATM-224ENST00000534625 HHIPQ96QV1 700 aa7.13□□□□□ -1.27
ATM-224ENST00000534625 SYT17Q9BSW7 474 aa7.13□□□□□ -1.27
ATM-224ENST00000534625 DZANK1Q9NVP4 752 aa7.13□□□□□ -1.27
ATM-224ENST00000534625 SMG6Q86US8 1419 aaKnown RBP7.12□□□□□ -1.27
ATM-224ENST00000534625 WASHC2AQ641Q2 1341 aa7.12□□□□□ -1.27
ATM-224ENST00000534625 PNPLA7Q6ZV29 1317 aa7.12□□□□□ -1.27
ATM-224ENST00000534625 FSCN2O14926 492 aa7.12□□□□□ -1.27
ATM-224ENST00000534625 YBX3P16989 372 aaKnown RBP eCLIP7.12□□□□□ -1.27
ATM-224ENST00000534625 CES1P23141 567 aa7.12□□□□□ -1.27
ATM-224ENST00000534625 CD68P34810 354 aaPredicted RBP7.12□□□□□ -1.27
ATM-224ENST00000534625 IRAK1P51617 712 aa7.12□□□□□ -1.27
ATM-224ENST00000534625 UBL7Q96S82 380 aaPredicted RBP7.12□□□□□ -1.27
ATM-224ENST00000534625 POLKQ9UBT6 870 aa7.12□□□□□ -1.27
ATM-224ENST00000534625 CCNL1Q9UK58 526 aaPredicted RBP7.12□□□□□ -1.27
ATM-224ENST00000534625 MAP2P11137 1827 aaKnown RBP7.12□□□□□ -1.27
ATM-224ENST00000534625 DOT1LQ8TEK3 1739 aa7.12□□□□□ -1.27
ATM-224ENST00000534625 NCAPD2Q15021 1401 aa7.11□□□□□ -1.27
ATM-224ENST00000534625 PCDH11XQ9BZA7 1347 aa7.11□□□□□ -1.27
ATM-224ENST00000534625 PCDH11YQ9BZA8 1340 aa7.11□□□□□ -1.27
ATM-224ENST00000534625 LY75O60449 1722 aa7.11□□□□□ -1.27
ATM-224ENST00000534625 PPM1GO15355 546 aaPredicted RBP7.11□□□□□ -1.27
ATM-224ENST00000534625 DDX3YO15523 660 aaKnown RBP7.11□□□□□ -1.27
ATM-224ENST00000534625 ADAM11O75078 769 aa7.11□□□□□ -1.27
ATM-224ENST00000534625 MED26O95402 600 aa7.11□□□□□ -1.27
ATM-224ENST00000534625 HSPA5P11021 654 aaKnown RBP7.11□□□□□ -1.27
ATM-224ENST00000534625 PCSK2P16519 638 aa7.11□□□□□ -1.27
ATM-224ENST00000534625 TAL1P17542 331 aaPredicted RBP7.11□□□□□ -1.27
ATM-224ENST00000534625 PTPRAP18433 802 aa7.11□□□□□ -1.27
ATM-224ENST00000534625 CD97P48960 835 aa7.11□□□□□ -1.27
ATM-224ENST00000534625 ALKBH2Q6NS38 261 aa7.11□□□□□ -1.27
ATM-224ENST00000534625 SLC51AQ86UW1 340 aa7.11□□□□□ -1.27
ATM-224ENST00000534625 FOXD4L4Q8WXT5 416 aaPredicted RBP7.11□□□□□ -1.27
ATM-224ENST00000534625 POLR3GLQ9BT43 218 aa7.11□□□□□ -1.27
ATM-224ENST00000534625 TFCP2L1Q9NZI6 479 aa7.11□□□□□ -1.27
ATM-224ENST00000534625 MAP3K5Q99683 1374 aa7.1□□□□□ -1.27
ATM-224ENST00000534625 EREGO14944 169 aa7.1□□□□□ -1.27
ATM-224ENST00000534625 TNFRSF21O75509 655 aa7.1□□□□□ -1.27
ATM-224ENST00000534625 MPRIPQ6WCQ1 1025 aa7.1□□□□□ -1.27
ATM-224ENST00000534625 KIAA1211Q6ZU35 1233 aa7.1□□□□□ -1.27
ATM-224ENST00000534625 KLHDC7BQ96G42 594 aa7.1□□□□□ -1.27
ATM-224ENST00000534625 PANK3Q9H999 370 aa7.1□□□□□ -1.27
ATM-224ENST00000534625 ANO2Q9NQ90 1003 aa7.1□□□□□ -1.27
ATM-224ENST00000534625 CCDC87Q9NVE4 849 aa7.1□□□□□ -1.27
ATM-224ENST00000534625 FOXD3Q9UJU5 478 aaPredicted RBP7.1□□□□□ -1.27
ATM-224ENST00000534625 TUBGCP6Q96RT7 1819 aa7.1□□□□□ -1.27
ATM-224ENST00000534625 GOLGB1Q14789 3259 aaKnown RBP7.1□□□□□ -1.27
ATM-224ENST00000534625 QSER1Q2KHR3 1735 aa7.1□□□□□ -1.27
ATM-224ENST00000534625 FAM13AO94988 1023 aa7.09□□□□□ -1.27
ATM-224ENST00000534625 TNNT2P45379 298 aaPredicted RBP7.09□□□□□ -1.27
ATM-224ENST00000534625 FKBP4Q02790 459 aaKnown RBP eCLIP7.09□□□□□ -1.27
ATM-224ENST00000534625 ZNF211Q13398 564 aaPredicted RBP7.09□□□□□ -1.27
ATM-224ENST00000534625 EIF4A2Q14240 407 aaKnown RBP7.09□□□□□ -1.27
ATM-224ENST00000534625 ECM1Q16610 540 aa7.09□□□□□ -1.27
ATM-224ENST00000534625 ACAD11Q709F0 780 aa7.09□□□□□ -1.27
ATM-224ENST00000534625 COL23A1Q86Y22 540 aaPredicted RBP7.09□□□□□ -1.27
ATM-224ENST00000534625 KLHL23Q8NBE8 558 aa7.09□□□□□ -1.27
ATM-224ENST00000534625 PIGBQ92521 554 aa7.09□□□□□ -1.27
ATM-224ENST00000534625 OAS3Q9Y6K5 1087 aaKnown RBP7.09□□□□□ -1.27
ATM-224ENST00000534625 COL24A1Q17RW2 1714 aa7.09□□□□□ -1.27
ATM-224ENST00000534625 ANKRD26Q9UPS8 1709 aa7.09□□□□□ -1.27
ATM-224ENST00000534625 ITGB4P16144 1822 aa7.08□□□□□ -1.28
ATM-224ENST00000534625 PKD1L3Q7Z443 1732 aa7.08□□□□□ -1.28
ATM-224ENST00000534625 H3BRJ5 948 aa7.08□□□□□ -1.28
ATM-224ENST00000534625 PDE2AO00408 941 aaPredicted RBP7.08□□□□□ -1.28
ATM-224ENST00000534625 GLB1P16278 677 aa7.08□□□□□ -1.28
ATM-224ENST00000534625 POLD1P28340 1107 aa7.08□□□□□ -1.28
ATM-224ENST00000534625 LCE1DQ5T752 114 aa7.08□□□□□ -1.28
ATM-224ENST00000534625 HGSNATQ68CP4 663 aa7.08□□□□□ -1.28
ATM-224ENST00000534625 GJD3Q8N144 294 aa7.08□□□□□ -1.28
ATM-224ENST00000534625 ARMC10Q8N2F6 343 aa7.08□□□□□ -1.28
ATM-224ENST00000534625 TMEM102Q8N9M5 508 aaPredicted RBP7.08□□□□□ -1.28
ATM-224ENST00000534625 CCER1Q8TC90 406 aaPredicted RBP7.08□□□□□ -1.28
ATM-224ENST00000534625 UBASH3BQ8TF42 649 aa7.08□□□□□ -1.28
ATM-224ENST00000534625 SMARCC1Q92922 1105 aaPredicted RBP7.08□□□□□ -1.28
ATM-224ENST00000534625 PMEPA1Q969W9 287 aa7.08□□□□□ -1.28
ATM-224ENST00000534625 NXPE3Q969Y0 559 aa7.08□□□□□ -1.28
ATM-224ENST00000534625 ZKSCAN3Q9BRR0 538 aa7.08□□□□□ -1.28
ATM-224ENST00000534625 SEC31BQ9NQW1 1179 aa7.08□□□□□ -1.28
ATM-224ENST00000534625 SOX13Q9UN79 622 aa7.08□□□□□ -1.28
ATM-224ENST00000534625 SPG7Q9UQ90 795 aa7.08□□□□□ -1.28
ATM-224ENST00000534625 PALLDQ8WX93 1383 aa7.08□□□□□ -1.28
ATM-224ENST00000534625 TOGARAM1Q9Y4F4 1720 aa7.07□□□□□ -1.28
ATM-224ENST00000534625 TAF1LQ8IZX4 1826 aa7.07□□□□□ -1.28
ATM-224ENST00000534625 ABL1P00519 1130 aa7.07□□□□□ -1.28
ATM-224ENST00000534625 FAM117BQ6P1L5 589 aa7.07□□□□□ -1.28
ATM-224ENST00000534625 AMIGO3Q86WK7 504 aa7.07□□□□□ -1.28
ATM-224ENST00000534625 WNT8BQ93098 351 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms