RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 CFAP100Q494V2 611 aa19.86■□□□□ 0.77
VPS51-216ENST00000534591 PNMA8AQ86V59 439 aaPredicted RBP19.86■□□□□ 0.77
VPS51-216ENST00000534591 DHX36Q9H2U1 1008 aaKnown RBP19.86■□□□□ 0.77
VPS51-216ENST00000534591 RBM28Q9NW13 759 aaKnown RBP19.86■□□□□ 0.77
VPS51-216ENST00000534591 SWAP70Q9UH65 585 aa19.86■□□□□ 0.77
VPS51-216ENST00000534591 CLEC11AQ9Y240 323 aa19.86■□□□□ 0.77
VPS51-216ENST00000534591 MMP14P50281 582 aa19.86■□□□□ 0.77
VPS51-216ENST00000534591 SSRP1Q08945 709 aaKnown RBP19.86■□□□□ 0.77
VPS51-216ENST00000534591 CSPP1Q1MSJ5 1256 aa19.86■□□□□ 0.77
VPS51-216ENST00000534591 CCDC144CPQ8IYA2 1237 aa19.86■□□□□ 0.77
VPS51-216ENST00000534591 TMEM87AQ8NBN3 555 aa19.86■□□□□ 0.77
VPS51-216ENST00000534591 SLC44A5Q8NCS7 719 aa19.86■□□□□ 0.77
VPS51-216ENST00000534591 NEDD1Q8NHV4 660 aa19.86■□□□□ 0.77
VPS51-216ENST00000534591 TRPM4Q8TD43 1214 aa19.86■□□□□ 0.77
VPS51-216ENST00000534591 NUP133Q8WUM0 1156 aa19.86■□□□□ 0.77
VPS51-216ENST00000534591 WASF1Q92558 559 aa19.86■□□□□ 0.77
VPS51-216ENST00000534591 C8orf76Q96K31 380 aa19.86■□□□□ 0.77
VPS51-216ENST00000534591 EHD4Q9H223 541 aa19.86■□□□□ 0.77
VPS51-216ENST00000534591 PRPF40AO75400 957 aaKnown RBP19.85■□□□□ 0.77
VPS51-216ENST00000534591 FMNL1O95466 1100 aaPredicted RBP19.85■□□□□ 0.77
VPS51-216ENST00000534591 EGFRP00533 1210 aa19.85■□□□□ 0.77
VPS51-216ENST00000534591 TROAPQ12815 778 aa19.85■□□□□ 0.77
VPS51-216ENST00000534591 RESTQ13127 1097 aa19.85■□□□□ 0.77
VPS51-216ENST00000534591 RCSD1Q6JBY9 416 aa19.85■□□□□ 0.77
VPS51-216ENST00000534591 MICALL2Q8IY33 904 aa19.85■□□□□ 0.77
VPS51-216ENST00000534591 OGFOD1Q8N543 542 aa19.85■□□□□ 0.77
VPS51-216ENST00000534591 MAP3K14Q99558 947 aa19.85■□□□□ 0.77
VPS51-216ENST00000534591 SERPINB13Q9UIV8 391 aa19.85■□□□□ 0.77
VPS51-216ENST00000534591 PASKQ96RG2 1323 aa19.85■□□□□ 0.77
VPS51-216ENST00000534591 NMT2O60551 498 aa19.84■□□□□ 0.77
VPS51-216ENST00000534591 ITGBL1O95965 494 aaPredicted RBP19.84■□□□□ 0.77
VPS51-216ENST00000534591 HIRAP54198 1017 aaPredicted RBP19.84■□□□□ 0.77
VPS51-216ENST00000534591 TRIM22Q8IYM9 498 aa19.84■□□□□ 0.77
VPS51-216ENST00000534591 KAT14Q9H8E8 782 aa19.84■□□□□ 0.77
VPS51-216ENST00000534591 IL17RBQ9NRM6 502 aa19.84■□□□□ 0.77
VPS51-216ENST00000534591 ADARB2Q9NS39 739 aaKnown RBP19.84■□□□□ 0.77
VPS51-216ENST00000534591 CNOT7Q9UIV1 285 aaKnown RBP19.84■□□□□ 0.77
VPS51-216ENST00000534591 ENTPD3O75355 529 aa19.83■□□□□ 0.77
VPS51-216ENST00000534591 FMR1Q06787 632 aaKnown RBP eCLIP19.83■□□□□ 0.772e-8■□□□□ 10.4
VPS51-216ENST00000534591 NFIAQ12857 509 aa19.83■□□□□ 0.77
VPS51-216ENST00000534591 FERMT3Q86UX7 667 aa19.83■□□□□ 0.77
VPS51-216ENST00000534591 FBXO18Q8NFZ0 1043 aa19.83■□□□□ 0.77
VPS51-216ENST00000534591 CHAMP1Q96JM3 812 aa19.83■□□□□ 0.77
VPS51-216ENST00000534591 PCDHAC2Q9Y5I4 1007 aa19.83■□□□□ 0.77
VPS51-216ENST00000534591 PLIN4Q96Q06 1357 aa19.83■□□□□ 0.77
VPS51-216ENST00000534591 COL2A1P02458 1487 aaPredicted RBP19.82■□□□□ 0.76
VPS51-216ENST00000534591 KRT85P78386 507 aa19.82■□□□□ 0.76
VPS51-216ENST00000534591 KLHL40Q2TBA0 621 aa19.82■□□□□ 0.76
VPS51-216ENST00000534591 FOXD4L6Q3SYB3 417 aaPredicted RBP19.82■□□□□ 0.76
VPS51-216ENST00000534591 FOXD4L3Q6VB84 417 aaPredicted RBP19.82■□□□□ 0.76
VPS51-216ENST00000534591 USP50Q70EL3 339 aaPredicted RBP19.82■□□□□ 0.76
VPS51-216ENST00000534591 CRACR2BQ8N4Y2 399 aaPredicted RBP19.82■□□□□ 0.76
VPS51-216ENST00000534591 DNAJC5GQ8N7S2 189 aa19.82■□□□□ 0.76
VPS51-216ENST00000534591 MTMR14Q8NCE2 650 aa19.82■□□□□ 0.76
VPS51-216ENST00000534591 CTCFLQ8NI51 663 aaPredicted RBP19.82■□□□□ 0.76
VPS51-216ENST00000534591 ALG1Q9BT22 464 aa19.82■□□□□ 0.76
VPS51-216ENST00000534591 TMOD2Q9NZR1 351 aa19.82■□□□□ 0.76
VPS51-216ENST00000534591 FAM198AQ9UFP1 575 aa19.82■□□□□ 0.76
VPS51-216ENST00000534591 TCHHQ07283 1943 aa19.82■□□□□ 0.76
VPS51-216ENST00000534591 SPDYE2BA6NHP3 402 aa19.81■□□□□ 0.76
VPS51-216ENST00000534591 PPFIA3O75145 1194 aa19.81■□□□□ 0.76
VPS51-216ENST00000534591 SPDYE6P0CI01 402 aa19.81■□□□□ 0.76
VPS51-216ENST00000534591 DNM1Q05193 864 aaKnown RBP19.81■□□□□ 0.76
VPS51-216ENST00000534591 DLGAP5Q15398 846 aa19.81■□□□□ 0.76
VPS51-216ENST00000534591 ATL3Q6DD88 541 aa19.81■□□□□ 0.76
VPS51-216ENST00000534591 SAMD7Q7Z3H4 446 aa19.81■□□□□ 0.76
VPS51-216ENST00000534591 NBPF11Q86T75 865 aa19.81■□□□□ 0.76
VPS51-216ENST00000534591 PHKBQ93100 1093 aa19.81■□□□□ 0.76
VPS51-216ENST00000534591 PRMT6Q96LA8 375 aaPredicted RBP19.81■□□□□ 0.76
VPS51-216ENST00000534591 SLC26A6Q9BXS9 759 aa19.81■□□□□ 0.76
VPS51-216ENST00000534591 TDRD3Q9H7E2 651 aaKnown RBP19.81■□□□□ 0.76
VPS51-216ENST00000534591 CNPY2Q9Y2B0 182 aa19.81■□□□□ 0.76
VPS51-216ENST00000534591 DDX49Q9Y6V7 483 aaKnown RBP19.81■□□□□ 0.76
VPS51-216ENST00000534591 NCLP19338 710 aaKnown RBP19.81■□□□□ 0.76
VPS51-216ENST00000534591 KIF5BP33176 963 aa19.81■□□□□ 0.76
VPS51-216ENST00000534591 NOVP48745 357 aa19.81■□□□□ 0.76
VPS51-216ENST00000534591 RNF26Q9BY78 433 aaPredicted RBP19.81■□□□□ 0.76
VPS51-216ENST00000534591 PI4KBQ9UBF8 816 aa19.81■□□□□ 0.76
VPS51-216ENST00000534591 DEXIO95424 95 aa19.8■□□□□ 0.76
VPS51-216ENST00000534591 MBD3O95983 291 aa19.8■□□□□ 0.76
VPS51-216ENST00000534591 RPS12P25398 132 aaKnown RBP19.8■□□□□ 0.76
VPS51-216ENST00000534591 FOSBP53539 338 aa19.8■□□□□ 0.76
VPS51-216ENST00000534591 TRIM29Q14134 588 aa19.8■□□□□ 0.76
VPS51-216ENST00000534591 TBC1D10BQ4KMP7 808 aaPredicted RBP19.8■□□□□ 0.76
VPS51-216ENST00000534591 USP48Q86UV5 1035 aa19.8■□□□□ 0.76
VPS51-216ENST00000534591 FOXP4Q8IVH2 680 aaPredicted RBP19.8■□□□□ 0.76
VPS51-216ENST00000534591 PNMA1Q8ND90 353 aa19.8■□□□□ 0.76
VPS51-216ENST00000534591 DPF2Q92785 391 aa19.8■□□□□ 0.76
VPS51-216ENST00000534591 CCDC17Q96LX7 622 aa19.8■□□□□ 0.76
VPS51-216ENST00000534591 ATRNL1Q5VV63 1379 aa19.79■□□□□ 0.76
VPS51-216ENST00000534591 TRAF5O00463 557 aa19.79■□□□□ 0.76
VPS51-216ENST00000534591 GNAQP50148 359 aa19.79■□□□□ 0.76
VPS51-216ENST00000534591 CACNB3P54284 484 aa19.79■□□□□ 0.76
VPS51-216ENST00000534591 AKAP17AQ02040 695 aaKnown RBP19.79■□□□□ 0.76
VPS51-216ENST00000534591 PPP4R3BQ5MIZ7 849 aa19.79■□□□□ 0.76
VPS51-216ENST00000534591 TMTC3Q6ZXV5 915 aa19.79■□□□□ 0.76
VPS51-216ENST00000534591 ZFPM1Q8IX07 1006 aa19.79■□□□□ 0.76
VPS51-216ENST00000534591 SCAND2PQ9GZW5 306 aaPredicted RBP19.79■□□□□ 0.76
VPS51-216ENST00000534591 PRPF3O43395 683 aaKnown RBP19.78■□□□□ 0.76
VPS51-216ENST00000534591 TOP1P11387 765 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms