RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	HFE2	Q6ZVN8	426 aa		6.67	□□□□□ -1.34
ECHDC1-223	ENST00000534442	SYT9	Q86SS6	491 aa		6.67	□□□□□ -1.34
ECHDC1-223	ENST00000534442	TMEM102	Q8N9M5	508 aa	Predicted RBP	6.67	□□□□□ -1.34
ECHDC1-223	ENST00000534442	NANOS1	Q8WY41	292 aa	Known RBP	6.67	□□□□□ -1.34
ECHDC1-223	ENST00000534442	UBXN4	Q92575	508 aa		6.67	□□□□□ -1.34
ECHDC1-223	ENST00000534442	TRERF1	Q96PN7	1200 aa		6.67	□□□□□ -1.34
ECHDC1-223	ENST00000534442	GML	Q99445	158 aa		6.67	□□□□□ -1.34
ECHDC1-223	ENST00000534442	IRX2	Q9BZI1	471 aa	Predicted RBP	6.67	□□□□□ -1.34
ECHDC1-223	ENST00000534442	RASSF4	Q9H2L5	321 aa		6.67	□□□□□ -1.34
ECHDC1-223	ENST00000534442	DNAJB12	Q9NXW2	375 aa	Known RBP	6.67	□□□□□ -1.34
ECHDC1-223	ENST00000534442	PRKAG2	Q9UGJ0	569 aa		6.67	□□□□□ -1.34
ECHDC1-223	ENST00000534442	PRR12	Q9ULL5	1215 aa		6.67	□□□□□ -1.34
ECHDC1-223	ENST00000534442	INPP5F	Q9Y2H2	1132 aa		6.67	□□□□□ -1.34
ECHDC1-223	ENST00000534442	USP54	Q70EL1	1684 aa		6.67	□□□□□ -1.34
ECHDC1-223	ENST00000534442	CLTCL1	P53675	1640 aa		6.66	□□□□□ -1.34
ECHDC1-223	ENST00000534442	CDC14C	A4D256	554 aa		6.66	□□□□□ -1.34
ECHDC1-223	ENST00000534442		F6X3S4	739 aa		6.66	□□□□□ -1.34
ECHDC1-223	ENST00000534442	ATP11A	P98196	1134 aa		6.66	□□□□□ -1.34
ECHDC1-223	ENST00000534442	NEUROD1	Q13562	356 aa		6.66	□□□□□ -1.34
ECHDC1-223	ENST00000534442	CCDC85B	Q15834	202 aa	Predicted RBP	6.66	□□□□□ -1.34
ECHDC1-223	ENST00000534442	ZNF468	Q5VIY5	522 aa	Predicted RBP	6.66	□□□□□ -1.34
ECHDC1-223	ENST00000534442	FOXR1	Q6PIV2	292 aa		6.66	□□□□□ -1.34
ECHDC1-223	ENST00000534442	SV2A	Q7L0J3	742 aa		6.66	□□□□□ -1.34
ECHDC1-223	ENST00000534442	PBX4	Q9BYU1	374 aa		6.66	□□□□□ -1.34
ECHDC1-223	ENST00000534442	TANGO6	Q9C0B7	1094 aa		6.66	□□□□□ -1.34
ECHDC1-223	ENST00000534442	KLF15	Q9UIH9	416 aa		6.66	□□□□□ -1.34
ECHDC1-223	ENST00000534442	SETX	Q7Z333	2677 aa	Known RBP	6.66	□□□□□ -1.34
ECHDC1-223	ENST00000534442	HTT	P42858	3142 aa		6.65	□□□□□ -1.34
ECHDC1-223	ENST00000534442		A0A096LPE4	126 aa		6.65	□□□□□ -1.34
ECHDC1-223	ENST00000534442		A0A1W2PPZ6	126 aa		6.65	□□□□□ -1.34
ECHDC1-223	ENST00000534442	PDE2A	O00408	941 aa	Predicted RBP	6.65	□□□□□ -1.34
ECHDC1-223	ENST00000534442	KRT37	O76014	449 aa		6.65	□□□□□ -1.34
ECHDC1-223	ENST00000534442	LMNB1	P20700	586 aa		6.65	□□□□□ -1.34
ECHDC1-223	ENST00000534442	GJA8	P48165	433 aa		6.65	□□□□□ -1.34
ECHDC1-223	ENST00000534442	PAK2	Q13177	524 aa		6.65	□□□□□ -1.34
ECHDC1-223	ENST00000534442	ADAMTSL4	Q6UY14	1074 aa		6.65	□□□□□ -1.34
ECHDC1-223	ENST00000534442	TPTE2	Q6XPS3	522 aa		6.65	□□□□□ -1.34
ECHDC1-223	ENST00000534442	SV2B	Q7L1I2	683 aa		6.65	□□□□□ -1.34
ECHDC1-223	ENST00000534442	SPACA7	Q96KW9	195 aa		6.65	□□□□□ -1.34
ECHDC1-223	ENST00000534442	POP1	Q99575	1024 aa	Known RBP	6.65	□□□□□ -1.34
ECHDC1-223	ENST00000534442	IGFLR1	Q9H665	355 aa		6.65	□□□□□ -1.34
ECHDC1-223	ENST00000534442	ADAMTS1	Q9UHI8	967 aa		6.65	□□□□□ -1.34
ECHDC1-223	ENST00000534442	MUC6	Q6W4X9	2439 aa		6.64	□□□□□ -1.35
ECHDC1-223	ENST00000534442	ATRX	P46100	2492 aa		6.64	□□□□□ -1.35
ECHDC1-223	ENST00000534442	SIN3B	O75182	1162 aa		6.64	□□□□□ -1.35
ECHDC1-223	ENST00000534442	CELA3A	P09093	270 aa		6.64	□□□□□ -1.35
ECHDC1-223	ENST00000534442	PCBP4	P57723	403 aa	Known RBP	6.64	□□□□□ -1.35
ECHDC1-223	ENST00000534442	FAAP100	Q0VG06	881 aa		6.64	□□□□□ -1.35
ECHDC1-223	ENST00000534442	GNL2	Q13823	731 aa	Known RBP	6.64	□□□□□ -1.35
ECHDC1-223	ENST00000534442	GAS6	Q14393	721 aa		6.64	□□□□□ -1.35
ECHDC1-223	ENST00000534442	UBE2O	Q9C0C9	1292 aa	Known RBP	6.64	□□□□□ -1.35
ECHDC1-223	ENST00000534442	TRANK1	O15050	2925 aa		6.64	□□□□□ -1.35
ECHDC1-223	ENST00000534442	MINDY4B	A8MYZ0	360 aa		6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	BMP4	P12644	408 aa		6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	KCNA3	P22001	575 aa		6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	DNAJA1	P31689	397 aa	Known RBP	6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	MRE11	P49959	708 aa		6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	TBC1D8B	Q0IIM8	1120 aa		6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	ITSN1	Q15811	1721 aa		6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	PKN2	Q16513	984 aa	Known RBP	6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	MAP3K11	Q16584	847 aa		6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	DALRD3	Q5D0E6	543 aa	Known RBP	6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	RELL1	Q8IUW5	271 aa		6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	PHC3	Q8NDX5	983 aa		6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	ASAP3	Q8TDY4	903 aa		6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	DHX38	Q92620	1227 aa	Known RBP	6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	TMEM74	Q96NL1	305 aa		6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	NECAB3	Q96P71	396 aa	Predicted RBP	6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	MDFI	Q99750	246 aa		6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	PAPPA2	Q9BXP8	1791 aa		6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	MUC3B	Q9H195	1237 aa		6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	PRO3102	Q9H379	93 aa		6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	ZNF576	Q9H609	170 aa		6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	ZFYVE1	Q9HBF4	777 aa		6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	SEC31B	Q9NQW1	1179 aa		6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	MTMR10	Q9NXD2	777 aa		6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	NAGPA	Q9UK23	515 aa		6.63	□□□□□ -1.35
ECHDC1-223	ENST00000534442	ENC1	O14682	589 aa		6.62	□□□□□ -1.35
ECHDC1-223	ENST00000534442	GHRH	P01286	108 aa		6.62	□□□□□ -1.35
ECHDC1-223	ENST00000534442	EIF2AK2	P19525	551 aa	Known RBP	6.62	□□□□□ -1.35
ECHDC1-223	ENST00000534442	GBP2	P32456	591 aa	Predicted RBP	6.62	□□□□□ -1.35
ECHDC1-223	ENST00000534442	ARID5A	Q03989	594 aa		6.62	□□□□□ -1.35
ECHDC1-223	ENST00000534442	PCSK7	Q16549	785 aa		6.62	□□□□□ -1.35
ECHDC1-223	ENST00000534442	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	6.62	□□□□□ -1.35
ECHDC1-223	ENST00000534442	PERM1	Q5SV97	790 aa		6.62	□□□□□ -1.35
ECHDC1-223	ENST00000534442	MAP1S	Q66K74	1059 aa	Predicted RBP	6.62	□□□□□ -1.35
ECHDC1-223	ENST00000534442	MCF2L2	Q86YR7	1114 aa		6.62	□□□□□ -1.35
ECHDC1-223	ENST00000534442	CNTROB	Q8N137	903 aa		6.62	□□□□□ -1.35
ECHDC1-223	ENST00000534442	GPR161	Q8N6U8	529 aa	Known RBP	6.62	□□□□□ -1.35
ECHDC1-223	ENST00000534442	FLAD1	Q8NFF5	587 aa		6.62	□□□□□ -1.35
ECHDC1-223	ENST00000534442	TNFRSF25	Q93038	417 aa		6.62	□□□□□ -1.35
ECHDC1-223	ENST00000534442	GPRASP2	Q96D09	838 aa		6.62	□□□□□ -1.35
ECHDC1-223	ENST00000534442	RHOV	Q96L33	236 aa		6.62	□□□□□ -1.35
ECHDC1-223	ENST00000534442	SPON2	Q9BUD6	331 aa		6.62	□□□□□ -1.35
ECHDC1-223	ENST00000534442	AVEN	Q9NQS1	362 aa	Predicted RBP	6.62	□□□□□ -1.35
ECHDC1-223	ENST00000534442	DDX21	Q9NR30	783 aa	Known RBP eCLIP	6.62	□□□□□ -1.35
ECHDC1-223	ENST00000534442	SLC6A14	Q9UN76	642 aa		6.62	□□□□□ -1.35
ECHDC1-223	ENST00000534442	SLIT3	O75094	1523 aa		6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	EXOC5	O00471	708 aa		6.61	□□□□□ -1.35
ECHDC1-223	ENST00000534442	PAGE1	O75459	146 aa		6.61	□□□□□ -1.35

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