RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 USP17L22D6RA61 530 aa28.01■■■□□ 2.07
YIF1A-213ENST00000534374 USP17L17D6RBQ6 530 aa28.01■■■□□ 2.07
YIF1A-213ENST00000534374 USP17L19D6RCP7 530 aa28.01■■■□□ 2.07
YIF1A-213ENST00000534374 USP17L20D6RJB6 530 aa28.01■■■□□ 2.07
YIF1A-213ENST00000534374 ZFYP08048 801 aaPredicted RBP28.01■■■□□ 2.07
YIF1A-213ENST00000534374 CYP2D6P10635 497 aa28.01■■■□□ 2.07
YIF1A-213ENST00000534374 EVX2Q03828 476 aa28.01■■■□□ 2.07
YIF1A-213ENST00000534374 USP17L24Q0WX57 530 aa28.01■■■□□ 2.07
YIF1A-213ENST00000534374 MTFR1Q15390 333 aa28.01■■■□□ 2.07
YIF1A-213ENST00000534374 GPRC5AQ8NFJ5 357 aa28.01■■■□□ 2.07
YIF1A-213ENST00000534374 ACER1Q8TDN7 264 aa28.01■■■□□ 2.07
YIF1A-213ENST00000534374 GCC1Q96CN9 775 aa28.01■■■□□ 2.07
YIF1A-213ENST00000534374 BIN2Q9UBW5 565 aaPredicted RBP28.01■■■□□ 2.07
YIF1A-213ENST00000534374 USP17L12C9JPN9 530 aa28■■■□□ 2.07
YIF1A-213ENST00000534374 USP17L21D6R901 530 aa28■■■□□ 2.07
YIF1A-213ENST00000534374 ERC2O15083 957 aa28■■■□□ 2.07
YIF1A-213ENST00000534374 AAMPQ13685 434 aa28■■■□□ 2.07
YIF1A-213ENST00000534374 SEPT2Q15019 361 aa28■■■□□ 2.07
YIF1A-213ENST00000534374 STRBPQ96SI9 672 aaKnown RBP28■■■□□ 2.07
YIF1A-213ENST00000534374 RBPJLQ9UBG7 517 aa28■■■□□ 2.07
YIF1A-213ENST00000534374 RNF113AO15541 343 aaKnown RBP27.99■■■□□ 2.07
YIF1A-213ENST00000534374 LRRFIP1Q32MZ4 808 aaKnown RBP27.99■■■□□ 2.07
YIF1A-213ENST00000534374 TSHZ3Q63HK5 1081 aa27.99■■■□□ 2.07
YIF1A-213ENST00000534374 TMEM179Q6ZVK1 233 aa27.99■■■□□ 2.07
YIF1A-213ENST00000534374 NKX2-3Q8TAU0 364 aa27.99■■■□□ 2.07
YIF1A-213ENST00000534374 CCDC17Q96LX7 622 aa27.99■■■□□ 2.07
YIF1A-213ENST00000534374 PCDH10Q9P2E7 1040 aa27.99■■■□□ 2.07
YIF1A-213ENST00000534374 GJD2Q9UKL4 321 aa27.99■■■□□ 2.07
YIF1A-213ENST00000534374 MPHOSPH10O00566 681 aaKnown RBP27.98■■■□□ 2.07
YIF1A-213ENST00000534374 GLRX3O76003 335 aaKnown RBP27.98■■■□□ 2.07
YIF1A-213ENST00000534374 GJB1P08034 283 aa27.98■■■□□ 2.07
YIF1A-213ENST00000534374 CATSPERGQ6ZRH7 1159 aa27.98■■■□□ 2.07
YIF1A-213ENST00000534374 APPBP2Q92624 585 aa27.98■■■□□ 2.07
YIF1A-213ENST00000534374 DYNLL2Q96FJ2 89 aa27.98■■■□□ 2.07
YIF1A-213ENST00000534374 TXNRD2Q9NNW7 524 aa27.98■■■□□ 2.07
YIF1A-213ENST00000534374 BAZ2AQ9UIF9 1905 aaKnown RBP27.98■■■□□ 2.07
YIF1A-213ENST00000534374 CCL5P13501 91 aa27.97■■■□□ 2.07
YIF1A-213ENST00000534374 CDK8P49336 464 aa27.97■■■□□ 2.07
YIF1A-213ENST00000534374 HDAC1Q13547 482 aaPredicted RBP27.97■■■□□ 2.07
YIF1A-213ENST00000534374 ZYXQ15942 572 aaKnown RBP27.97■■■□□ 2.07
YIF1A-213ENST00000534374 GIMAP6Q6P9H5 292 aa27.97■■■□□ 2.07
YIF1A-213ENST00000534374 CTR9Q6PD62 1173 aa27.97■■■□□ 2.07
YIF1A-213ENST00000534374 SLC44A5Q8NCS7 719 aa27.97■■■□□ 2.07
YIF1A-213ENST00000534374 OSBP2Q969R2 916 aa27.97■■■□□ 2.07
YIF1A-213ENST00000534374 RNF208Q9H0X6 261 aa27.97■■■□□ 2.07
YIF1A-213ENST00000534374 VCAM1P19320 739 aa27.96■■■□□ 2.07
YIF1A-213ENST00000534374 C16orf86Q6ZW13 317 aa27.96■■■□□ 2.07
YIF1A-213ENST00000534374 PI4K2BQ8TCG2 481 aa27.96■■■□□ 2.07
YIF1A-213ENST00000534374 RABGAP1Q9Y3P9 1069 aa27.96■■■□□ 2.07
YIF1A-213ENST00000534374 ELNP15502 786 aa27.95■■■□□ 2.06
YIF1A-213ENST00000534374 CAPN2P17655 700 aa27.95■■■□□ 2.06
YIF1A-213ENST00000534374 GJA8P48165 433 aa27.95■■■□□ 2.06
YIF1A-213ENST00000534374 ERVK-9P63128 1117 aa27.95■■■□□ 2.06
YIF1A-213ENST00000534374 ERVK-24P63145 666 aa27.95■■■□□ 2.06
YIF1A-213ENST00000534374 Q3C1V9 767 aa27.95■■■□□ 2.06
YIF1A-213ENST00000534374 SBK1Q52WX2 424 aa27.95■■■□□ 2.06
YIF1A-213ENST00000534374 LBX2Q6XYB7 198 aa27.95■■■□□ 2.06
YIF1A-213ENST00000534374 ZBTB47Q9UFB7 747 aaPredicted RBP27.95■■■□□ 2.06
YIF1A-213ENST00000534374 CYP2D7A0A087X1C5 515 aa27.94■■■□□ 2.06
YIF1A-213ENST00000534374 A0A1W2PRG0 241 aa27.94■■■□□ 2.06
YIF1A-213ENST00000534374 MAPK4P31152 587 aa27.94■■■□□ 2.06
YIF1A-213ENST00000534374 POTEEQ6S8J3 1075 aa27.94■■■□□ 2.06
YIF1A-213ENST00000534374 ARPP21Q9UBL0 812 aaPredicted RBP27.94■■■□□ 2.06
YIF1A-213ENST00000534374 GSG1L2A8MUP6 293 aa27.93■■■□□ 2.06
YIF1A-213ENST00000534374 INHAP05111 366 aa27.93■■■□□ 2.06
YIF1A-213ENST00000534374 AKR1B1P15121 316 aa27.93■■■□□ 2.06
YIF1A-213ENST00000534374 GNAT2P19087 354 aa27.93■■■□□ 2.06
YIF1A-213ENST00000534374 MX1P20591 662 aa27.93■■■□□ 2.06
YIF1A-213ENST00000534374 ANKRD45Q5TZF3 282 aa27.93■■■□□ 2.06
YIF1A-213ENST00000534374 OTUD7AQ8TE49 926 aaPredicted RBP27.93■■■□□ 2.06
YIF1A-213ENST00000534374 SIAH1Q8IUQ4 282 aa27.92■■■□□ 2.06
YIF1A-213ENST00000534374 UNC93B1Q9H1C4 597 aa27.92■■■□□ 2.06
YIF1A-213ENST00000534374 RPAP3Q9H6T3 665 aaPredicted RBP27.92■■■□□ 2.06
YIF1A-213ENST00000534374 SMIM22K7EJ46 135 aa27.91■■■□□ 2.06
YIF1A-213ENST00000534374 PEX10O60683 326 aa27.91■■■□□ 2.06
YIF1A-213ENST00000534374 CCAR1Q8IX12 1150 aaKnown RBP27.91■■■□□ 2.06
YIF1A-213ENST00000534374 NUDT12Q9BQG2 462 aa27.91■■■□□ 2.06
YIF1A-213ENST00000534374 PAGR1Q9BTK6 254 aa27.91■■■□□ 2.06
YIF1A-213ENST00000534374 ARHGEF10LQ9HCE6 1279 aa27.91■■■□□ 2.06
YIF1A-213ENST00000534374 HOXC10Q9NYD6 342 aa27.91■■■□□ 2.06
YIF1A-213ENST00000534374 TMX2Q9Y320 296 aa27.91■■■□□ 2.06
YIF1A-213ENST00000534374 SALL3Q9BXA9 1300 aa27.91■■■□□ 2.06
YIF1A-213ENST00000534374 GPAA1O43292 621 aa27.9■■■□□ 2.06
YIF1A-213ENST00000534374 XRCC5P13010 732 aaKnown RBP27.9■■■□□ 2.06
YIF1A-213ENST00000534374 CCNA1P78396 465 aa27.9■■■□□ 2.06
YIF1A-213ENST00000534374 SOCS4Q8WXH5 440 aa27.9■■■□□ 2.06
YIF1A-213ENST00000534374 LPAR1Q92633 364 aa27.9■■■□□ 2.06
YIF1A-213ENST00000534374 SHISA4Q96DD7 197 aa27.9■■■□□ 2.06
YIF1A-213ENST00000534374 SH2D4AQ9H788 454 aa27.9■■■□□ 2.06
YIF1A-213ENST00000534374 KANSL2Q9H9L4 492 aa27.9■■■□□ 2.06
YIF1A-213ENST00000534374 MYH8P13535 1937 aa27.9■■■□□ 2.06
YIF1A-213ENST00000534374 CNMDO75829 334 aa27.89■■■□□ 2.06
YIF1A-213ENST00000534374 SGPL1O95470 568 aa27.89■■■□□ 2.06
YIF1A-213ENST00000534374 COG2Q14746 738 aa27.89■■■□□ 2.06
YIF1A-213ENST00000534374 PORCNQ9H237 461 aa27.89■■■□□ 2.06
YIF1A-213ENST00000534374 STAP2Q9UGK3 403 aa27.89■■■□□ 2.06
YIF1A-213ENST00000534374 PATL2C9JE40 543 aaKnown RBP27.88■■■□□ 2.05
YIF1A-213ENST00000534374 HMGCRP04035 888 aa27.88■■■□□ 2.05
YIF1A-213ENST00000534374 ICA1Q05084 483 aa27.88■■■□□ 2.05
YIF1A-213ENST00000534374 U2AF1L4Q8WU68 220 aaKnown RBP27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms