RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 P2RX7Q99572 595 aaKnown RBP13.04□□□□□ -0.32
SDHD-208ENST00000534010 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.04□□□□□ -0.32
SDHD-208ENST00000534010 EPB41L4AQ9HCS5 686 aaPredicted RBP13.04□□□□□ -0.32
SDHD-208ENST00000534010 TXNRD2Q9NNW7 524 aa13.04□□□□□ -0.32
SDHD-208ENST00000534010 RBPJLQ9UBG7 517 aa13.04□□□□□ -0.32
SDHD-208ENST00000534010 GABRQQ9UN88 632 aa13.04□□□□□ -0.32
SDHD-208ENST00000534010 ZNF236Q9UL36 1845 aa13.04□□□□□ -0.32
SDHD-208ENST00000534010 USP17L12C9JPN9 530 aa13.03□□□□□ -0.32
SDHD-208ENST00000534010 USP17L21D6R901 530 aa13.03□□□□□ -0.32
SDHD-208ENST00000534010 CNMDO75829 334 aa13.03□□□□□ -0.32
SDHD-208ENST00000534010 IGHA2P01877 340 aa13.03□□□□□ -0.32
SDHD-208ENST00000534010 MX1P20591 662 aa13.03□□□□□ -0.32
SDHD-208ENST00000534010 HERVK_113P62684 666 aa13.03□□□□□ -0.32
SDHD-208ENST00000534010 SLC9C1Q4G0N8 1177 aa13.03□□□□□ -0.32
SDHD-208ENST00000534010 ZMYM1Q5SVZ6 1142 aa13.03□□□□□ -0.32
SDHD-208ENST00000534010 CATSPERGQ6ZRH7 1159 aa13.03□□□□□ -0.32
SDHD-208ENST00000534010 ANKRD13CQ8N6S4 541 aa13.03□□□□□ -0.32
SDHD-208ENST00000534010 USP6NLQ92738 828 aa13.03□□□□□ -0.32
SDHD-208ENST00000534010 DYNLL2Q96FJ2 89 aa13.03□□□□□ -0.32
SDHD-208ENST00000534010 GPATCH3Q96I76 525 aa13.03□□□□□ -0.32
SDHD-208ENST00000534010 MYPNQ86TC9 1320 aa13.03□□□□□ -0.32
SDHD-208ENST00000534010 CYP2D7A0A087X1C5 515 aa13.02□□□□□ -0.33
SDHD-208ENST00000534010 ERC2O15083 957 aa13.02□□□□□ -0.33
SDHD-208ENST00000534010 POLR3DP05423 398 aaPredicted RBP13.02□□□□□ -0.33
SDHD-208ENST00000534010 VCAM1P19320 739 aa13.02□□□□□ -0.33
SDHD-208ENST00000534010 HOXD10P28358 340 aa13.02□□□□□ -0.33
SDHD-208ENST00000534010 GRK4P32298 578 aa13.02□□□□□ -0.33
SDHD-208ENST00000534010 CDK8P49336 464 aa13.02□□□□□ -0.33
SDHD-208ENST00000534010 USP14P54578 494 aa13.02□□□□□ -0.33
SDHD-208ENST00000534010 SEPT2Q15019 361 aa13.02□□□□□ -0.33
SDHD-208ENST00000534010 KIAA1755Q5JYT7 1200 aa13.02□□□□□ -0.33
SDHD-208ENST00000534010 TMEM179Q6ZVK1 233 aa13.02□□□□□ -0.33
SDHD-208ENST00000534010 NBPF11Q86T75 865 aa13.02□□□□□ -0.33
SDHD-208ENST00000534010 SMCR8Q8TEV9 937 aaPredicted RBP13.02□□□□□ -0.33
SDHD-208ENST00000534010 SH3TC2Q8TF17 1288 aa13.02□□□□□ -0.33
SDHD-208ENST00000534010 SHISA4Q96DD7 197 aa13.02□□□□□ -0.33
SDHD-208ENST00000534010 TRIM34Q9BYJ4 488 aa13.02□□□□□ -0.33
SDHD-208ENST00000534010 COL11A1P12107 1806 aaPredicted RBP13.02□□□□□ -0.33
SDHD-208ENST00000534010 M0R2C6 588 aa13.01□□□□□ -0.33
SDHD-208ENST00000534010 GPAA1O43292 621 aa13.01□□□□□ -0.33
SDHD-208ENST00000534010 FMNL1O95466 1100 aaPredicted RBP13.01□□□□□ -0.33
SDHD-208ENST00000534010 AKR1B1P15121 316 aa13.01□□□□□ -0.33
SDHD-208ENST00000534010 FLT3LGP49771 235 aa13.01□□□□□ -0.33
SDHD-208ENST00000534010 PDE1AP54750 535 aa13.01□□□□□ -0.33
SDHD-208ENST00000534010 MTFR1Q15390 333 aa13.01□□□□□ -0.33
SDHD-208ENST00000534010 Q3C1V9 767 aa13.01□□□□□ -0.33
SDHD-208ENST00000534010 SLAIN1Q8ND83 568 aa13.01□□□□□ -0.33
SDHD-208ENST00000534010 GTF3C2Q8WUA4 911 aaPredicted RBP13.01□□□□□ -0.33
SDHD-208ENST00000534010 CCDC17Q96LX7 622 aa13.01□□□□□ -0.33
SDHD-208ENST00000534010 OSBPL3Q9H4L5 887 aa13.01□□□□□ -0.33
SDHD-208ENST00000534010 TMOD4Q9NZQ9 345 aa13.01□□□□□ -0.33
SDHD-208ENST00000534010 ARPP21Q9UBL0 812 aaPredicted RBP13.01□□□□□ -0.33
SDHD-208ENST00000534010 TMX2Q9Y320 296 aa13.01□□□□□ -0.33
SDHD-208ENST00000534010 SLC4A4Q9Y6R1 1079 aa13.01□□□□□ -0.33
SDHD-208ENST00000534010 MYH4Q9Y623 1939 aa13.01□□□□□ -0.33
SDHD-208ENST00000534010 PLIN4Q96Q06 1357 aa13□□□□□ -0.33
SDHD-208ENST00000534010 IGKV6D-41A0A0C4DH26 115 aa13□□□□□ -0.33
SDHD-208ENST00000534010 USP17L15C9J2P7 530 aa13□□□□□ -0.33
SDHD-208ENST00000534010 USP17L13C9JLJ4 530 aa13□□□□□ -0.33
SDHD-208ENST00000534010 USP17L11C9JVI0 530 aa13□□□□□ -0.33
SDHD-208ENST00000534010 USP17L18D6R9N7 530 aa13□□□□□ -0.33
SDHD-208ENST00000534010 USP17L22D6RA61 530 aa13□□□□□ -0.33
SDHD-208ENST00000534010 USP17L17D6RBQ6 530 aa13□□□□□ -0.33
SDHD-208ENST00000534010 USP17L19D6RCP7 530 aa13□□□□□ -0.33
SDHD-208ENST00000534010 USP17L20D6RJB6 530 aa13□□□□□ -0.33
SDHD-208ENST00000534010 PEX10O60683 326 aa13□□□□□ -0.33
SDHD-208ENST00000534010 IGHDP01880 384 aa13□□□□□ -0.33
SDHD-208ENST00000534010 EN2P19622 333 aaPredicted RBP13□□□□□ -0.33
SDHD-208ENST00000534010 ERVK-9P63128 1117 aa13□□□□□ -0.33
SDHD-208ENST00000534010 ERVK-24P63145 666 aa13□□□□□ -0.33
SDHD-208ENST00000534010 USP17L24Q0WX57 530 aa13□□□□□ -0.33
SDHD-208ENST00000534010 YTHDC1Q96MU7 727 aaKnown RBP13□□□□□ -0.33
SDHD-208ENST00000534010 SEC62Q99442 399 aaKnown RBP13□□□□□ -0.33
SDHD-208ENST00000534010 CABP5Q9NP86 173 aa13□□□□□ -0.33
SDHD-208ENST00000534010 RABGAP1Q9Y3P9 1069 aa13□□□□□ -0.33
SDHD-208ENST00000534010 SPDYE16A6NNV3 312 aaPredicted RBP12.99□□□□□ -0.33
SDHD-208ENST00000534010 TNPO2O14787 897 aaKnown RBP12.99□□□□□ -0.33
SDHD-208ENST00000534010 GJB1P08034 283 aa12.99□□□□□ -0.33
SDHD-208ENST00000534010 GNAT2P19087 354 aa12.99□□□□□ -0.33
SDHD-208ENST00000534010 RASA1P20936 1047 aa12.99□□□□□ -0.33
SDHD-208ENST00000534010 RAB3GAP1Q15042 981 aa12.99□□□□□ -0.33
SDHD-208ENST00000534010 MORN1Q5T089 497 aa12.99□□□□□ -0.33
SDHD-208ENST00000534010 MAP3K21Q5TCX8 1036 aa12.99□□□□□ -0.33
SDHD-208ENST00000534010 EXOC6Q8TAG9 804 aa12.99□□□□□ -0.33
SDHD-208ENST00000534010 PORCNQ9H237 461 aa12.99□□□□□ -0.33
SDHD-208ENST00000534010 PAK6Q9NQU5 681 aaPredicted RBP12.99□□□□□ -0.33
SDHD-208ENST00000534010 ADAMTS5Q9UNA0 930 aa12.99□□□□□ -0.33
SDHD-208ENST00000534010 ZNFX1Q9P2E3 1918 aaKnown RBP12.99□□□□□ -0.33
SDHD-208ENST00000534010 ALPK3Q96L96 1907 aa12.98□□□□□ -0.33
SDHD-208ENST00000534010 FRMPD3Q5JV73 1810 aa12.98□□□□□ -0.33
SDHD-208ENST00000534010 PATL2C9JE40 543 aaKnown RBP12.98□□□□□ -0.33
SDHD-208ENST00000534010 ADCY3O60266 1144 aa12.98□□□□□ -0.33
SDHD-208ENST00000534010 XRCC5P13010 732 aaKnown RBP12.98□□□□□ -0.33
SDHD-208ENST00000534010 GJA8P48165 433 aa12.98□□□□□ -0.33
SDHD-208ENST00000534010 IRX3P78415 501 aaPredicted RBP12.98□□□□□ -0.33
SDHD-208ENST00000534010 NUCB1Q02818 461 aa12.98□□□□□ -0.33
SDHD-208ENST00000534010 ANKRD45Q5TZF3 282 aa12.98□□□□□ -0.33
SDHD-208ENST00000534010 CLEC10AQ8IUN9 316 aa12.98□□□□□ -0.33
SDHD-208ENST00000534010 RAET1EQ8TD07 263 aa12.98□□□□□ -0.33
SDHD-208ENST00000534010 LPAR1Q92633 364 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms