RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 C14orf93Q9H972 538 aaKnown RBP7.43□□□□□ -1.22
CLNS1A-212ENST00000533957 RAD18Q9NS91 495 aa7.43□□□□□ -1.22
CLNS1A-212ENST00000533957 SLC52A1Q9NWF4 448 aa7.43□□□□□ -1.22
CLNS1A-212ENST00000533957 ZFYVE9O95405 1425 aa7.43□□□□□ -1.22
CLNS1A-212ENST00000533957 NRXN3Q9Y4C0 1643 aa7.42□□□□□ -1.22
CLNS1A-212ENST00000533957 MAP7Q14244 749 aa7.42□□□□□ -1.22
CLNS1A-212ENST00000533957 HP1BP3Q5SSJ5 553 aaPredicted RBP7.42□□□□□ -1.22
CLNS1A-212ENST00000533957 CC2D1BQ5T0F9 858 aaKnown RBP7.42□□□□□ -1.22
CLNS1A-212ENST00000533957 DUSP27Q5VZP5 1158 aa7.42□□□□□ -1.22
CLNS1A-212ENST00000533957 NFXL1Q6ZNB6 911 aa7.42□□□□□ -1.22
CLNS1A-212ENST00000533957 TRIM56Q9BRZ2 755 aaKnown RBP7.42□□□□□ -1.22
CLNS1A-212ENST00000533957 SEMA6CQ9H3T2 930 aa7.42□□□□□ -1.22
CLNS1A-212ENST00000533957 XIRP1Q702N8 1843 aaKnown RBP7.42□□□□□ -1.22
CLNS1A-212ENST00000533957 MED14O60244 1454 aa7.42□□□□□ -1.22
CLNS1A-212ENST00000533957 NKTRP30414 1462 aaKnown RBP7.42□□□□□ -1.22
CLNS1A-212ENST00000533957 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.41□□□□□ -1.22
CLNS1A-212ENST00000533957 ECEL1O95672 775 aa7.41□□□□□ -1.22
CLNS1A-212ENST00000533957 B3GALT4O96024 378 aa7.41□□□□□ -1.22
CLNS1A-212ENST00000533957 DDX54Q8TDD1 881 aaKnown RBP7.41□□□□□ -1.22
CLNS1A-212ENST00000533957 ZNF428Q96B54 188 aa7.41□□□□□ -1.22
CLNS1A-212ENST00000533957 FBXL18Q96ME1 805 aa7.41□□□□□ -1.22
CLNS1A-212ENST00000533957 CORO1BQ9BR76 489 aa7.41□□□□□ -1.22
CLNS1A-212ENST00000533957 EHD4Q9H223 541 aa7.41□□□□□ -1.22
CLNS1A-212ENST00000533957 GSX1Q9H4S2 264 aaPredicted RBP7.41□□□□□ -1.22
CLNS1A-212ENST00000533957 ACSS3Q9H6R3 686 aa7.41□□□□□ -1.22
CLNS1A-212ENST00000533957 FAM105AQ9NUU6 356 aa7.41□□□□□ -1.22
CLNS1A-212ENST00000533957 BSDC1Q9NW68 430 aaPredicted RBP7.41□□□□□ -1.22
CLNS1A-212ENST00000533957 MAPK8IP3Q9UPT6 1336 aa7.41□□□□□ -1.22
CLNS1A-212ENST00000533957 NEXMIFQ5QGS0 1516 aa7.41□□□□□ -1.22
CLNS1A-212ENST00000533957 CHD2O14647 1828 aaKnown RBP7.41□□□□□ -1.22
CLNS1A-212ENST00000533957 YBX3P16989 372 aaKnown RBP eCLIP7.4□□□□□ -1.22
CLNS1A-212ENST00000533957 RAB6AP20340 208 aa7.4□□□□□ -1.22
CLNS1A-212ENST00000533957 ITPKAP23677 461 aa7.4□□□□□ -1.22
CLNS1A-212ENST00000533957 ASPAP45381 313 aa7.4□□□□□ -1.22
CLNS1A-212ENST00000533957 SERPINB4P48594 390 aa7.4□□□□□ -1.22
CLNS1A-212ENST00000533957 HSPA2P54652 639 aa7.4□□□□□ -1.22
CLNS1A-212ENST00000533957 ARHGAP4P98171 946 aa7.4□□□□□ -1.22
CLNS1A-212ENST00000533957 GLYCTKQ8IVS8 523 aa7.4□□□□□ -1.22
CLNS1A-212ENST00000533957 EXOC6Q8TAG9 804 aa7.4□□□□□ -1.22
CLNS1A-212ENST00000533957 PMFBP1Q8TBY8 1022 aa7.4□□□□□ -1.22
CLNS1A-212ENST00000533957 ZNF576Q9H609 170 aa7.4□□□□□ -1.22
CLNS1A-212ENST00000533957 CENPJQ9HC77 1338 aaPredicted RBP7.4□□□□□ -1.22
CLNS1A-212ENST00000533957 DIP2AQ14689 1571 aa7.4□□□□□ -1.22
CLNS1A-212ENST00000533957 NWD1Q149M9 1564 aa7.4□□□□□ -1.22
CLNS1A-212ENST00000533957 LTBP4Q8N2S1 1624 aa7.4□□□□□ -1.22
CLNS1A-212ENST00000533957 USP32Q8NFA0 1604 aa7.39□□□□□ -1.23
CLNS1A-212ENST00000533957 EVC2Q86UK5 1308 aa7.39□□□□□ -1.23
CLNS1A-212ENST00000533957 H3BRB1 525 aa7.39□□□□□ -1.23
CLNS1A-212ENST00000533957 AOC2O75106 756 aa7.39□□□□□ -1.23
CLNS1A-212ENST00000533957 CPNE3O75131 537 aaKnown RBP7.39□□□□□ -1.23
CLNS1A-212ENST00000533957 CYP27A1Q02318 531 aa7.39□□□□□ -1.23
CLNS1A-212ENST00000533957 ORC1Q13415 861 aa7.39□□□□□ -1.23
CLNS1A-212ENST00000533957 SEZ6L2Q6UXD5 910 aa7.39□□□□□ -1.23
CLNS1A-212ENST00000533957 CBLL1Q75N03 491 aa7.39□□□□□ -1.23
CLNS1A-212ENST00000533957 VSIG10LQ86VR7 867 aa7.39□□□□□ -1.23
CLNS1A-212ENST00000533957 TP53INP2Q8IXH6 220 aa7.39□□□□□ -1.23
CLNS1A-212ENST00000533957 RUNDC1Q96C34 613 aa7.39□□□□□ -1.23
CLNS1A-212ENST00000533957 TUT1Q9H6E5 874 aaKnown RBP7.39□□□□□ -1.23
CLNS1A-212ENST00000533957 C1GALT1Q9NS00 363 aa7.39□□□□□ -1.23
CLNS1A-212ENST00000533957 USTQ9Y2C2 406 aa7.39□□□□□ -1.23
CLNS1A-212ENST00000533957 ARID1BQ8NFD5 2236 aaPredicted RBP7.38□□□□□ -1.23
CLNS1A-212ENST00000533957 KDM2BQ8NHM5 1336 aa7.38□□□□□ -1.23
CLNS1A-212ENST00000533957 NDUFB5O43674 189 aa7.38□□□□□ -1.23
CLNS1A-212ENST00000533957 PTPN12Q05209 780 aaKnown RBP7.38□□□□□ -1.23
CLNS1A-212ENST00000533957 COL19A1Q14993 1142 aa7.38□□□□□ -1.23
CLNS1A-212ENST00000533957 ZNF765Q7L2R6 523 aa7.38□□□□□ -1.23
CLNS1A-212ENST00000533957 CITED4Q96RK1 184 aa7.38□□□□□ -1.23
CLNS1A-212ENST00000533957 MYH16Q9H6N6 1097 aa7.38□□□□□ -1.23
CLNS1A-212ENST00000533957 ZC3H7BQ9UGR2 993 aaKnown RBP7.38□□□□□ -1.23
CLNS1A-212ENST00000533957 IL16Q14005 1332 aa7.37□□□□□ -1.23
CLNS1A-212ENST00000533957 SYNGAP1Q96PV0 1343 aa7.37□□□□□ -1.23
CLNS1A-212ENST00000533957 DYNC1LI2O43237 492 aaPredicted RBP7.37□□□□□ -1.23
CLNS1A-212ENST00000533957 OGFOD3Q6PK18 319 aa7.37□□□□□ -1.23
CLNS1A-212ENST00000533957 FAM129BQ96TA1 746 aa7.37□□□□□ -1.23
CLNS1A-212ENST00000533957 LRRC4CQ9HCJ2 640 aa7.37□□□□□ -1.23
CLNS1A-212ENST00000533957 NPHS2Q9NP85 383 aa7.37□□□□□ -1.23
CLNS1A-212ENST00000533957 PPP1R9AQ9ULJ8 1098 aa7.37□□□□□ -1.23
CLNS1A-212ENST00000533957 AP4E1Q9UPM8 1137 aa7.37□□□□□ -1.23
CLNS1A-212ENST00000533957 XRN1Q8IZH2 1706 aaKnown RBP7.37□□□□□ -1.23
CLNS1A-212ENST00000533957 KNDC1Q76NI1 1749 aa7.36□□□□□ -1.23
CLNS1A-212ENST00000533957 CALD1Q05682 793 aaKnown RBP7.36□□□□□ -1.23
CLNS1A-212ENST00000533957 AP3B2Q13367 1082 aa7.36□□□□□ -1.23
CLNS1A-212ENST00000533957 MORC1Q86VD1 984 aa7.36□□□□□ -1.23
CLNS1A-212ENST00000533957 CCDC74AQ96AQ1 378 aa7.36□□□□□ -1.23
CLNS1A-212ENST00000533957 WDR18Q9BV38 432 aa7.36□□□□□ -1.23
CLNS1A-212ENST00000533957 UPF2Q9HAU5 1272 aaKnown RBP7.36□□□□□ -1.23
CLNS1A-212ENST00000533957 NPHP4O75161 1426 aaPredicted RBP7.35□□□□□ -1.23
CLNS1A-212ENST00000533957 ANKRD36BQ8N2N9 1353 aa7.35□□□□□ -1.23
CLNS1A-212ENST00000533957 TMEM2Q9UHN6 1383 aa7.35□□□□□ -1.23
CLNS1A-212ENST00000533957 EIF1AYO14602 144 aaKnown RBP7.35□□□□□ -1.23
CLNS1A-212ENST00000533957 BECN1Q14457 450 aa7.35□□□□□ -1.23
CLNS1A-212ENST00000533957 RPS26P11Q5JNZ5 115 aaPredicted RBP7.35□□□□□ -1.23
CLNS1A-212ENST00000533957 NIF3L1Q9GZT8 377 aa7.35□□□□□ -1.23
CLNS1A-212ENST00000533957 DNAJC25Q9H1X3 360 aa7.35□□□□□ -1.23
CLNS1A-212ENST00000533957 RWDD1Q9H446 243 aaPredicted RBP7.35□□□□□ -1.23
CLNS1A-212ENST00000533957 LGR6Q9HBX8 967 aa7.35□□□□□ -1.23
CLNS1A-212ENST00000533957 ABCB6Q9NP58 842 aa7.35□□□□□ -1.23
CLNS1A-212ENST00000533957 PAK6Q9NQU5 681 aaPredicted RBP7.35□□□□□ -1.23
CLNS1A-212ENST00000533957 TERF2IPQ9NYB0 399 aa7.35□□□□□ -1.23
CLNS1A-212ENST00000533957 DAGLAQ9Y4D2 1042 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms