RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 FAM47AQ5JRC9 791 aa15.96■□□□□ 0.15
CMTM1-219ENST00000533953 TMEM179Q6ZVK1 233 aa15.96■□□□□ 0.15
CMTM1-219ENST00000533953 TNS4Q8IZW8 715 aa15.96■□□□□ 0.15
CMTM1-219ENST00000533953 NKX2-3Q8TAU0 364 aa15.96■□□□□ 0.15
CMTM1-219ENST00000533953 CD99L2Q8TCZ2 262 aa15.96■□□□□ 0.15
CMTM1-219ENST00000533953 AGTPBP1Q9UPW5 1226 aa15.96■□□□□ 0.15
CMTM1-219ENST00000533953 CASP8AP2Q9UKL3 1982 aa15.96■□□□□ 0.15
CMTM1-219ENST00000533953 HIP1O00291 1037 aa15.95■□□□□ 0.14
CMTM1-219ENST00000533953 TLR2O60603 784 aa15.95■□□□□ 0.14
CMTM1-219ENST00000533953 ALX1Q15699 326 aa15.95■□□□□ 0.14
CMTM1-219ENST00000533953 TICAM2Q86XR7 235 aa15.95■□□□□ 0.14
CMTM1-219ENST00000533953 CCDC17Q96LX7 622 aa15.95■□□□□ 0.14
CMTM1-219ENST00000533953 ARHGAP39Q9C0H5 1083 aa15.95■□□□□ 0.14
CMTM1-219ENST00000533953 PPP4R2Q9NY27 417 aa15.95■□□□□ 0.14
CMTM1-219ENST00000533953 TMOD4Q9NZQ9 345 aa15.95■□□□□ 0.14
CMTM1-219ENST00000533953 PHIPQ8WWQ0 1821 aa15.94■□□□□ 0.14
CMTM1-219ENST00000533953 C19orf81C9J6K1 198 aa15.94■□□□□ 0.14
CMTM1-219ENST00000533953 EEF2P13639 858 aaKnown RBP15.94■□□□□ 0.14
CMTM1-219ENST00000533953 SP3Q02447 781 aa15.94■□□□□ 0.14
CMTM1-219ENST00000533953 USP17L2Q6R6M4 530 aa15.94■□□□□ 0.14
CMTM1-219ENST00000533953 C17orf99Q6UX52 265 aa15.94■□□□□ 0.14
CMTM1-219ENST00000533953 ZNF444Q8N0Y2 327 aaPredicted RBP15.94■□□□□ 0.14
CMTM1-219ENST00000533953 PROCA1Q8NCQ7 364 aaPredicted RBP15.94■□□□□ 0.14
CMTM1-219ENST00000533953 TBC1D2Q9BYX2 928 aa15.94■□□□□ 0.14
CMTM1-219ENST00000533953 NBPF3Q9H094 633 aa15.94■□□□□ 0.14
CMTM1-219ENST00000533953 ASCC2Q9H1I8 757 aaPredicted RBP15.94■□□□□ 0.14
CMTM1-219ENST00000533953 ZCCHC17Q9NP64 241 aaKnown RBP15.94■□□□□ 0.14
CMTM1-219ENST00000533953 ADGRA2Q96PE1 1338 aa15.94■□□□□ 0.14
CMTM1-219ENST00000533953 ROBO3Q96MS0 1386 aa15.93■□□□□ 0.14
CMTM1-219ENST00000533953 CTGFP29279 349 aa15.93■□□□□ 0.14
CMTM1-219ENST00000533953 TFAP4Q01664 338 aa15.93■□□□□ 0.14
CMTM1-219ENST00000533953 PTH1RQ03431 593 aa15.93■□□□□ 0.14
CMTM1-219ENST00000533953 ICA1Q05084 483 aa15.93■□□□□ 0.14
CMTM1-219ENST00000533953 SPICE1Q8N0Z3 855 aa15.93■□□□□ 0.14
CMTM1-219ENST00000533953 CHMP4CQ96CF2 233 aa15.93■□□□□ 0.14
CMTM1-219ENST00000533953 PARK7Q99497 189 aaKnown RBP15.93■□□□□ 0.14
CMTM1-219ENST00000533953 P2RX7Q99572 595 aaKnown RBP15.93■□□□□ 0.14
CMTM1-219ENST00000533953 MCOLN1Q9GZU1 580 aa15.93■□□□□ 0.14
CMTM1-219ENST00000533953 KIAA1683Q9H0B3 1180 aa15.93■□□□□ 0.14
CMTM1-219ENST00000533953 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.93■□□□□ 0.14
CMTM1-219ENST00000533953 RRP12Q5JTH9 1297 aaKnown RBP15.92■□□□□ 0.14
CMTM1-219ENST00000533953 POTEEQ6S8J3 1075 aa15.92■□□□□ 0.14
CMTM1-219ENST00000533953 TBC1D10CQ8IV04 446 aa15.92■□□□□ 0.14
CMTM1-219ENST00000533953 TOMM22Q9NS69 142 aa15.92■□□□□ 0.14
CMTM1-219ENST00000533953 ANAPC4Q9UJX5 808 aa15.92■□□□□ 0.14
CMTM1-219ENST00000533953 ATAD5Q96QE3 1844 aa15.91■□□□□ 0.14
CMTM1-219ENST00000533953 RAD21O60216 631 aa15.91■□□□□ 0.14
CMTM1-219ENST00000533953 NMT2O60551 498 aa15.91■□□□□ 0.14
CMTM1-219ENST00000533953 SLC3A2P08195 630 aaKnown RBP15.91■□□□□ 0.14
CMTM1-219ENST00000533953 VCAM1P19320 739 aa15.91■□□□□ 0.14
CMTM1-219ENST00000533953 MFAP1P55081 439 aaKnown RBP15.91■□□□□ 0.14
CMTM1-219ENST00000533953 PDE4BQ07343 736 aa15.91■□□□□ 0.14
CMTM1-219ENST00000533953 NOM1Q5C9Z4 860 aaKnown RBP15.91■□□□□ 0.14
CMTM1-219ENST00000533953 CTU1Q7Z7A3 348 aaKnown RBP15.91■□□□□ 0.14
CMTM1-219ENST00000533953 ANKRD13CQ8N6S4 541 aa15.91■□□□□ 0.14
CMTM1-219ENST00000533953 SMCR8Q8TEV9 937 aaPredicted RBP15.91■□□□□ 0.14
CMTM1-219ENST00000533953 KANSL2Q9H9L4 492 aa15.91■□□□□ 0.14
CMTM1-219ENST00000533953 CLIP2Q9UDT6 1046 aa15.91■□□□□ 0.14
CMTM1-219ENST00000533953 TMX2Q9Y320 296 aa15.91■□□□□ 0.14
CMTM1-219ENST00000533953 TRIM17Q9Y577 477 aa15.91■□□□□ 0.14
CMTM1-219ENST00000533953 IGKV6D-41A0A0C4DH26 115 aa15.9■□□□□ 0.14
CMTM1-219ENST00000533953 RANBP6O60518 1105 aaKnown RBP15.9■□□□□ 0.14
CMTM1-219ENST00000533953 BCRP11274 1271 aa15.9■□□□□ 0.14
CMTM1-219ENST00000533953 OSBPP22059 807 aa15.9■□□□□ 0.14
CMTM1-219ENST00000533953 IRX3P78415 501 aaPredicted RBP15.9■□□□□ 0.14
CMTM1-219ENST00000533953 NEDD1Q8NHV4 660 aa15.9■□□□□ 0.14
CMTM1-219ENST00000533953 CEP95Q96GE4 821 aa15.9■□□□□ 0.14
CMTM1-219ENST00000533953 C12orf42Q96LP6 360 aa15.9■□□□□ 0.14
CMTM1-219ENST00000533953 RPAP3Q9H6T3 665 aaPredicted RBP15.9■□□□□ 0.14
CMTM1-219ENST00000533953 ARHGEF10LQ9HCE6 1279 aa15.9■□□□□ 0.14
CMTM1-219ENST00000533953 TAOK2Q9UL54 1235 aa15.9■□□□□ 0.14
CMTM1-219ENST00000533953 SLC45A1Q9Y2W3 748 aa15.9■□□□□ 0.14
CMTM1-219ENST00000533953 SGSM2O43147 1006 aa15.89■□□□□ 0.13
CMTM1-219ENST00000533953 TSPY3P0CV98 308 aa15.89■□□□□ 0.13
CMTM1-219ENST00000533953 TSPY8P0CW00 308 aa15.89■□□□□ 0.13
CMTM1-219ENST00000533953 HOXA7P31268 230 aaPredicted RBP15.89■□□□□ 0.13
CMTM1-219ENST00000533953 USP14P54578 494 aa15.89■□□□□ 0.13
CMTM1-219ENST00000533953 LACTBP83111 547 aaPredicted RBP15.89■□□□□ 0.13
CMTM1-219ENST00000533953 BMP2KLQ5H9B9 411 aa15.89■□□□□ 0.13
CMTM1-219ENST00000533953 SAMD1Q6SPF0 538 aaPredicted RBP15.89■□□□□ 0.13
CMTM1-219ENST00000533953 OTOP1Q7RTM1 612 aa15.89■□□□□ 0.13
CMTM1-219ENST00000533953 RUFY2Q8WXA3 655 aa15.89■□□□□ 0.13
CMTM1-219ENST00000533953 ERO1AQ96HE7 468 aa15.89■□□□□ 0.13
CMTM1-219ENST00000533953 NUP88Q99567 741 aaPredicted RBP15.89■□□□□ 0.13
CMTM1-219ENST00000533953 DSCC1Q9BVC3 393 aa15.89■□□□□ 0.13
CMTM1-219ENST00000533953 TXNRD2Q9NNW7 524 aa15.89■□□□□ 0.13
CMTM1-219ENST00000533953 IL17RBQ9NRM6 502 aa15.89■□□□□ 0.13
CMTM1-219ENST00000533953 LAMB1P07942 1786 aa15.89■□□□□ 0.13
CMTM1-219ENST00000533953 TSPY2A6NKD2 308 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 USP17L15C9J2P7 530 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 USP17L13C9JLJ4 530 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 USP17L11C9JVI0 530 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 USP17L18D6R9N7 530 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 USP17L22D6RA61 530 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 USP17L17D6RBQ6 530 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 USP17L19D6RCP7 530 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 USP17L20D6RJB6 530 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 ZNF213O14771 459 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 CAPN15O75808 1086 aa15.88■□□□□ 0.13
CMTM1-219ENST00000533953 USP17L24Q0WX57 530 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms