RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 SEPT2Q15019 361 aa18.89■□□□□ 0.61
TSKU-204ENST00000533752 CCDC129Q6ZRS4 1044 aa18.89■□□□□ 0.61
TSKU-204ENST00000533752 CENPQQ7L2Z9 268 aaPredicted RBP18.89■□□□□ 0.61
TSKU-204ENST00000533752 C12orf42Q96LP6 360 aa18.89■□□□□ 0.61
TSKU-204ENST00000533752 SH2D4AQ9H788 454 aa18.89■□□□□ 0.61
TSKU-204ENST00000533752 EFCC1Q9HA90 598 aa18.89■□□□□ 0.61
TSKU-204ENST00000533752 DIAPH3Q9NSV4 1193 aa18.89■□□□□ 0.61
TSKU-204ENST00000533752 TRIM17Q9Y577 477 aa18.89■□□□□ 0.61
TSKU-204ENST00000533752 GNRH1P01148 92 aa18.88■□□□□ 0.61
TSKU-204ENST00000533752 AKR1B1P15121 316 aa18.88■□□□□ 0.61
TSKU-204ENST00000533752 SDSP20132 328 aa18.88■□□□□ 0.61
TSKU-204ENST00000533752 GUCY1A2P33402 732 aa18.88■□□□□ 0.61
TSKU-204ENST00000533752 GCLCP48506 637 aaPredicted RBP18.88■□□□□ 0.61
TSKU-204ENST00000533752 IRX3P78415 501 aaPredicted RBP18.88■□□□□ 0.61
TSKU-204ENST00000533752 LACTBP83111 547 aaPredicted RBP18.88■□□□□ 0.61
TSKU-204ENST00000533752 ICA1Q05084 483 aa18.88■□□□□ 0.61
TSKU-204ENST00000533752 NMIQ13287 307 aaPredicted RBP18.88■□□□□ 0.61
TSKU-204ENST00000533752 TTC22Q5TAA0 569 aa18.88■□□□□ 0.61
TSKU-204ENST00000533752 FBXO46Q6PJ61 603 aaPredicted RBP18.88■□□□□ 0.61
TSKU-204ENST00000533752 OTOP1Q7RTM1 612 aa18.88■□□□□ 0.61
TSKU-204ENST00000533752 FAM227BQ96M60 508 aa18.88■□□□□ 0.61
TSKU-204ENST00000533752 MKNK2Q9HBH9 465 aa18.88■□□□□ 0.61
TSKU-204ENST00000533752 ARHGEF10LQ9HCE6 1279 aa18.88■□□□□ 0.61
TSKU-204ENST00000533752 CPA4Q9UI42 421 aa18.88■□□□□ 0.61
TSKU-204ENST00000533752 ZMYM6O95789 1325 aa18.87■□□□□ 0.61
TSKU-204ENST00000533752 BCRP11274 1271 aa18.87■□□□□ 0.61
TSKU-204ENST00000533752 HOXA7P31268 230 aaPredicted RBP18.87■□□□□ 0.61
TSKU-204ENST00000533752 PDE4BQ07343 736 aa18.87■□□□□ 0.61
TSKU-204ENST00000533752 CCDC171Q6TFL3 1326 aa18.87■□□□□ 0.61
TSKU-204ENST00000533752 ASCC2Q9H1I8 757 aaPredicted RBP18.87■□□□□ 0.61
TSKU-204ENST00000533752 SMIM22K7EJ46 135 aa18.86■□□□□ 0.61
TSKU-204ENST00000533752 CENPBP07199 599 aaPredicted RBP18.86■□□□□ 0.61
TSKU-204ENST00000533752 PPARAQ07869 468 aa18.86■□□□□ 0.61
TSKU-204ENST00000533752 ALX1Q15699 326 aa18.86■□□□□ 0.61
TSKU-204ENST00000533752 GTF3C2Q8WUA4 911 aaPredicted RBP18.86■□□□□ 0.61
TSKU-204ENST00000533752 KANSL2Q9H9L4 492 aa18.86■□□□□ 0.61
TSKU-204ENST00000533752 EMILIN3Q9NT22 766 aa18.86■□□□□ 0.61
TSKU-204ENST00000533752 RASA1P20936 1047 aa18.85■□□□□ 0.61
TSKU-204ENST00000533752 ZYXQ15942 572 aaKnown RBP18.85■□□□□ 0.61
TSKU-204ENST00000533752 FAM110CQ1W6H9 321 aa18.85■□□□□ 0.61
TSKU-204ENST00000533752 ACER1Q8TDN7 264 aa18.85■□□□□ 0.61
TSKU-204ENST00000533752 FOXP2O15409 715 aa18.84■□□□□ 0.61
TSKU-204ENST00000533752 GSPT1P15170 499 aaKnown RBP18.84■□□□□ 0.61
TSKU-204ENST00000533752 VCAM1P19320 739 aa18.84■□□□□ 0.61
TSKU-204ENST00000533752 PRMT2P55345 433 aa18.84■□□□□ 0.61
TSKU-204ENST00000533752 ZNF589Q86UQ0 364 aaPredicted RBP18.84■□□□□ 0.61
TSKU-204ENST00000533752 ZNF444Q8N0Y2 327 aaPredicted RBP18.84■□□□□ 0.61
TSKU-204ENST00000533752 LPAR1Q92633 364 aa18.84■□□□□ 0.61
TSKU-204ENST00000533752 USP17L15C9J2P7 530 aa18.83■□□□□ 0.6
TSKU-204ENST00000533752 USP17L13C9JLJ4 530 aa18.83■□□□□ 0.6
TSKU-204ENST00000533752 USP17L11C9JVI0 530 aa18.83■□□□□ 0.6
TSKU-204ENST00000533752 USP17L18D6R9N7 530 aa18.83■□□□□ 0.6
TSKU-204ENST00000533752 USP17L22D6RA61 530 aa18.83■□□□□ 0.6
TSKU-204ENST00000533752 USP17L17D6RBQ6 530 aa18.83■□□□□ 0.6
TSKU-204ENST00000533752 USP17L19D6RCP7 530 aa18.83■□□□□ 0.6
TSKU-204ENST00000533752 USP17L20D6RJB6 530 aa18.83■□□□□ 0.6
TSKU-204ENST00000533752 HSPD1P10809 573 aaKnown RBP18.83■□□□□ 0.6
TSKU-204ENST00000533752 HOXD10P28358 340 aa18.83■□□□□ 0.6
TSKU-204ENST00000533752 FCGRTP55899 365 aa18.83■□□□□ 0.6
TSKU-204ENST00000533752 USP17L24Q0WX57 530 aa18.83■□□□□ 0.6
TSKU-204ENST00000533752 VPS53Q5VIR6 699 aa18.83■□□□□ 0.6
TSKU-204ENST00000533752 CWC27Q6UX04 472 aaKnown RBP18.83■□□□□ 0.6
TSKU-204ENST00000533752 ANAPC4Q9UJX5 808 aa18.83■□□□□ 0.6
TSKU-204ENST00000533752 HPS5Q9UPZ3 1129 aa18.83■□□□□ 0.6
TSKU-204ENST00000533752 PTPN22Q9Y2R2 807 aa18.83■□□□□ 0.6
TSKU-204ENST00000533752 TMX2Q9Y320 296 aa18.83■□□□□ 0.6
TSKU-204ENST00000533752 PLIN4Q96Q06 1357 aa18.82■□□□□ 0.6
TSKU-204ENST00000533752 PSMC4P43686 418 aa18.82■□□□□ 0.6
TSKU-204ENST00000533752 STK11IPQ8N1F8 1099 aa18.82■□□□□ 0.6
TSKU-204ENST00000533752 ANKRD13CQ8N6S4 541 aa18.82■□□□□ 0.6
TSKU-204ENST00000533752 RAD50Q92878 1312 aa18.81■□□□□ 0.6
TSKU-204ENST00000533752 GREB1LQ9C091 1923 aaPredicted RBP18.81■□□□□ 0.6
TSKU-204ENST00000533752 A0A1W2PRG0 241 aa18.81■□□□□ 0.6
TSKU-204ENST00000533752 FMNL1O95466 1100 aaPredicted RBP18.81■□□□□ 0.6
TSKU-204ENST00000533752 HERVK_113P62684 666 aa18.81■□□□□ 0.6
TSKU-204ENST00000533752 PPP4R3BQ5MIZ7 849 aa18.81■□□□□ 0.6
TSKU-204ENST00000533752 RUFY2Q8WXA3 655 aa18.81■□□□□ 0.6
TSKU-204ENST00000533752 CCDC136Q96JN2 1154 aa18.81■□□□□ 0.6
TSKU-204ENST00000533752 VCPKMTQ9H867 229 aa18.81■□□□□ 0.6
TSKU-204ENST00000533752 GOPCQ9HD26 462 aa18.81■□□□□ 0.6
TSKU-204ENST00000533752 PRDM1O75626 825 aa18.8■□□□□ 0.6
TSKU-204ENST00000533752 CAPN15O75808 1086 aa18.8■□□□□ 0.6
TSKU-204ENST00000533752 FGAP02671 866 aa18.8■□□□□ 0.6
TSKU-204ENST00000533752 TSPY3P0CV98 308 aa18.8■□□□□ 0.6
TSKU-204ENST00000533752 TSPY8P0CW00 308 aa18.8■□□□□ 0.6
TSKU-204ENST00000533752 PCP11498 1178 aaKnown RBP18.8■□□□□ 0.6
TSKU-204ENST00000533752 EEF2P13639 858 aaKnown RBP18.8■□□□□ 0.6
TSKU-204ENST00000533752 ATP2B2Q01814 1243 aa18.8■□□□□ 0.6
TSKU-204ENST00000533752 CATSPERGQ6ZRH7 1159 aa18.8■□□□□ 0.6
TSKU-204ENST00000533752 CLEC10AQ8IUN9 316 aa18.8■□□□□ 0.6
TSKU-204ENST00000533752 TRIM47Q96LD4 638 aa18.8■□□□□ 0.6
TSKU-204ENST00000533752 P2RX7Q99572 595 aaKnown RBP18.8■□□□□ 0.6
TSKU-204ENST00000533752 ARHGAP39Q9C0H5 1083 aa18.8■□□□□ 0.6
TSKU-204ENST00000533752 RPAP3Q9H6T3 665 aaPredicted RBP18.8■□□□□ 0.6
TSKU-204ENST00000533752 MORF4L1Q9UBU8 362 aa18.8■□□□□ 0.6
TSKU-204ENST00000533752 SYNPO2Q9UMS6 1093 aa18.8■□□□□ 0.6
TSKU-204ENST00000533752 CCDC85CA6NKD9 419 aa18.79■□□□□ 0.6
TSKU-204ENST00000533752 WDR46O15213 610 aaKnown RBP18.79■□□□□ 0.6
TSKU-204ENST00000533752 CAP1Q01518 475 aa18.79■□□□□ 0.6
TSKU-204ENST00000533752 SIAH1Q8IUQ4 282 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms