RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 IFNAR1P17181 557 aa11.2□□□□□ -0.62
CHKA-207ENST00000533728 CYP7A1P22680 504 aa11.2□□□□□ -0.62
CHKA-207ENST00000533728 TDO2P48775 406 aa11.2□□□□□ -0.62
CHKA-207ENST00000533728 FAM160A1Q05DH4 1040 aa11.2□□□□□ -0.62
CHKA-207ENST00000533728 TYRO3Q06418 890 aa11.2□□□□□ -0.62
CHKA-207ENST00000533728 NTRK3Q16288 839 aa11.2□□□□□ -0.62
CHKA-207ENST00000533728 TMEM67Q5HYA8 995 aa11.2□□□□□ -0.62
CHKA-207ENST00000533728 MYSM1Q5VVJ2 828 aa11.2□□□□□ -0.62
CHKA-207ENST00000533728 SPTY2D1Q68D10 685 aaPredicted RBP11.2□□□□□ -0.62
CHKA-207ENST00000533728 CERS3Q8IU89 383 aa11.2□□□□□ -0.62
CHKA-207ENST00000533728 LCORLQ8N3X6 602 aa11.2□□□□□ -0.62
CHKA-207ENST00000533728 C2orf69Q8N8R5 385 aa11.2□□□□□ -0.62
CHKA-207ENST00000533728 RNF214Q8ND24 703 aa11.2□□□□□ -0.62
CHKA-207ENST00000533728 JDP2Q8WYK2 163 aa11.2□□□□□ -0.62
CHKA-207ENST00000533728 FAM84BQ96KN1 310 aaPredicted RBP11.2□□□□□ -0.62
CHKA-207ENST00000533728 USP28Q96RU2 1077 aa11.2□□□□□ -0.62
CHKA-207ENST00000533728 RIOK1Q9BRS2 568 aaKnown RBP11.2□□□□□ -0.62
CHKA-207ENST00000533728 GBA2Q9HCG7 927 aaPredicted RBP11.2□□□□□ -0.62
CHKA-207ENST00000533728 RTN4Q9NQC3 1192 aaKnown RBP11.2□□□□□ -0.62
CHKA-207ENST00000533728 GPHNQ9NQX3 736 aaPredicted RBP11.2□□□□□ -0.62
CHKA-207ENST00000533728 ZSWIM5Q9P217 1185 aa11.2□□□□□ -0.62
CHKA-207ENST00000533728 LEMD3Q9Y2U8 911 aa11.2□□□□□ -0.62
CHKA-207ENST00000533728 ARIH1Q9Y4X5 557 aaPredicted RBP11.2□□□□□ -0.62
CHKA-207ENST00000533728 SLC12A7Q9Y666 1083 aa11.2□□□□□ -0.62
CHKA-207ENST00000533728 MORC2Q9Y6X9 1032 aaPredicted RBP11.2□□□□□ -0.62
CHKA-207ENST00000533728 BAHCC1Q9P281 2608 aa11.2□□□□□ -0.62
CHKA-207ENST00000533728 SNED1Q8TER0 1413 aa11.19□□□□□ -0.62
CHKA-207ENST00000533728 CACNA1BQ00975 2339 aa11.19□□□□□ -0.62
CHKA-207ENST00000533728 IRS2Q9Y4H2 1338 aa11.19□□□□□ -0.62
CHKA-207ENST00000533728 ERICH2A1L162 156 aa11.19□□□□□ -0.62
CHKA-207ENST00000533728 CCDC69A6NI79 296 aa11.19□□□□□ -0.62
CHKA-207ENST00000533728 GOLGA8AA7E2F4 631 aa11.19□□□□□ -0.62
CHKA-207ENST00000533728 IFIT3O14879 490 aaKnown RBP11.19□□□□□ -0.62
CHKA-207ENST00000533728 FMNL1O95466 1100 aaPredicted RBP11.19□□□□□ -0.62
CHKA-207ENST00000533728 PPARAQ07869 468 aa11.19□□□□□ -0.62
CHKA-207ENST00000533728 SASS6Q6UVJ0 657 aa11.19□□□□□ -0.62
CHKA-207ENST00000533728 C3orf67Q6ZVT6 689 aa11.19□□□□□ -0.62
CHKA-207ENST00000533728 VPS37DQ86XT2 251 aa11.19□□□□□ -0.62
CHKA-207ENST00000533728 LINC00301Q8NCQ3 95 aa11.19□□□□□ -0.62
CHKA-207ENST00000533728 ENGASEQ8NFI3 743 aa11.19□□□□□ -0.62
CHKA-207ENST00000533728 CELF1Q92879 486 aaKnown RBP11.19□□□□□ -0.62
CHKA-207ENST00000533728 MASTLQ96GX5 879 aa11.19□□□□□ -0.62
CHKA-207ENST00000533728 PGAP2Q9UHJ9 254 aa11.19□□□□□ -0.62
CHKA-207ENST00000533728 MRVI1Q9Y6F6 885 aa11.19□□□□□ -0.62
CHKA-207ENST00000533728 ZDBF2Q9HCK1 2354 aa11.18□□□□□ -0.62
CHKA-207ENST00000533728 MYH1P12882 1939 aa11.18□□□□□ -0.62
CHKA-207ENST00000533728 MYH8P13535 1937 aa11.18□□□□□ -0.62
CHKA-207ENST00000533728 FAM237AA0A1B0GTK4 181 aa11.18□□□□□ -0.62
CHKA-207ENST00000533728 PPP6R2O75170 966 aa11.18□□□□□ -0.62
CHKA-207ENST00000533728 NR1I2O75469 434 aa11.18□□□□□ -0.62
CHKA-207ENST00000533728 NPR1P16066 1061 aa11.18□□□□□ -0.62
CHKA-207ENST00000533728 U2AF2P26368 475 aaKnown RBP eCLIP11.18□□□□□ -0.62
CHKA-207ENST00000533728 HIBADHP31937 336 aaKnown RBP11.18□□□□□ -0.62
CHKA-207ENST00000533728 TERF1P54274 439 aa11.18□□□□□ -0.62
CHKA-207ENST00000533728 SSRP1Q08945 709 aaKnown RBP11.18□□□□□ -0.62
CHKA-207ENST00000533728 WTAPQ15007 396 aa11.18□□□□□ -0.62
CHKA-207ENST00000533728 SBK1Q52WX2 424 aa11.18□□□□□ -0.62
CHKA-207ENST00000533728 OTOP1Q7RTM1 612 aa11.18□□□□□ -0.62
CHKA-207ENST00000533728 ALYREFQ86V81 257 aaKnown RBP11.18□□□□□ -0.62
CHKA-207ENST00000533728 CCAR1Q8IX12 1150 aaKnown RBP11.18□□□□□ -0.62
CHKA-207ENST00000533728 TDRD7Q8NHU6 1098 aaKnown RBP11.18□□□□□ -0.62
CHKA-207ENST00000533728 MRPS27Q92552 414 aaKnown RBP11.18□□□□□ -0.62
CHKA-207ENST00000533728 ESR2Q92731 530 aa11.18□□□□□ -0.62
CHKA-207ENST00000533728 TIGD1Q96MW7 591 aa11.18□□□□□ -0.62
CHKA-207ENST00000533728 CRAMP1Q96RY5 1269 aa11.18□□□□□ -0.62
CHKA-207ENST00000533728 ALG1Q9BT22 464 aa11.18□□□□□ -0.62
CHKA-207ENST00000533728 ATP8A2Q9NTI2 1148 aa11.18□□□□□ -0.62
CHKA-207ENST00000533728 FAM217BQ9NTX9 383 aaPredicted RBP11.18□□□□□ -0.62
CHKA-207ENST00000533728 RAI14Q9P0K7 980 aa11.18□□□□□ -0.62
CHKA-207ENST00000533728 NR2E3Q9Y5X4 410 aa11.18□□□□□ -0.62
CHKA-207ENST00000533728 DDX60LQ5H9U9 1706 aaKnown RBP11.18□□□□□ -0.62
CHKA-207ENST00000533728 PSME4Q14997 1843 aa11.17□□□□□ -0.62
CHKA-207ENST00000533728 SNAP23O00161 211 aa11.17□□□□□ -0.62
CHKA-207ENST00000533728 ORC4O43929 436 aa11.17□□□□□ -0.62
CHKA-207ENST00000533728 KINO60870 393 aaKnown RBP11.17□□□□□ -0.62
CHKA-207ENST00000533728 CALM1P0DP23 149 aa11.17□□□□□ -0.62
CHKA-207ENST00000533728 CALM2P0DP24 149 aa11.17□□□□□ -0.62
CHKA-207ENST00000533728 CALM3P0DP25 149 aa11.17□□□□□ -0.62
CHKA-207ENST00000533728 GYG1P46976 350 aa11.17□□□□□ -0.62
CHKA-207ENST00000533728 SNW1Q13573 536 aaKnown RBP11.17□□□□□ -0.62
CHKA-207ENST00000533728 TRIM29Q14134 588 aa11.17□□□□□ -0.62
CHKA-207ENST00000533728 STK38Q15208 465 aa11.17□□□□□ -0.62
CHKA-207ENST00000533728 RTN1Q16799 776 aa11.17□□□□□ -0.62
CHKA-207ENST00000533728 ANO1Q5XXA6 986 aa11.17□□□□□ -0.62
CHKA-207ENST00000533728 NFXL1Q6ZNB6 911 aa11.17□□□□□ -0.62
CHKA-207ENST00000533728 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.17□□□□□ -0.62
CHKA-207ENST00000533728 ELOA2Q8IYF1 753 aaPredicted RBP11.17□□□□□ -0.62
CHKA-207ENST00000533728 TRIM22Q8IYM9 498 aa11.17□□□□□ -0.62
CHKA-207ENST00000533728 ZC3H15Q8WU90 426 aaKnown RBP11.17□□□□□ -0.62
CHKA-207ENST00000533728 C7orf43Q8WVR3 580 aa11.17□□□□□ -0.62
CHKA-207ENST00000533728 NOL10Q9BSC4 688 aaKnown RBP11.17□□□□□ -0.62
CHKA-207ENST00000533728 GOLGA6L6A8MZA4 724 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 SPTLC2O15270 562 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 PRKAB2O43741 272 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 DTNBO60941 627 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 DEXIO95424 95 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 ADCY5O95622 1261 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 SLC3A2P08195 630 aaKnown RBP11.16□□□□□ -0.62
CHKA-207ENST00000533728 CMA1P23946 247 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 CDC27P30260 824 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms