RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 STAG2Q8N3U4 1231 aa13.78□□□□□ -0.2
CLP1-205ENST00000533682 ZC3H12CQ9C0D7 883 aaKnown RBP13.78□□□□□ -0.2
CLP1-205ENST00000533682 WNT7AO00755 349 aa13.77□□□□□ -0.21
CLP1-205ENST00000533682 PTMAP06454 111 aaKnown RBP13.77□□□□□ -0.21
CLP1-205ENST00000533682 NPR1P16066 1061 aa13.77□□□□□ -0.21
CLP1-205ENST00000533682 AKAP17AQ02040 695 aaKnown RBP13.77□□□□□ -0.21
CLP1-205ENST00000533682 SAFBQ15424 915 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLP1-205ENST00000533682 PDGFDQ9GZP0 370 aaPredicted RBP13.77□□□□□ -0.21
CLP1-205ENST00000533682 RGS17Q9UGC6 210 aaPredicted RBP13.77□□□□□ -0.21
CLP1-205ENST00000533682 PRPF3O43395 683 aaKnown RBP13.76□□□□□ -0.21
CLP1-205ENST00000533682 COL11A2P13942 1736 aaPredicted RBP13.76□□□□□ -0.21
CLP1-205ENST00000533682 CMA1P23946 247 aa13.76□□□□□ -0.21
CLP1-205ENST00000533682 SCNN1DP51172 638 aa13.76□□□□□ -0.21
CLP1-205ENST00000533682 PICALMQ13492 652 aa13.76□□□□□ -0.21
CLP1-205ENST00000533682 DPP8Q6V1X1 898 aaPredicted RBP13.76□□□□□ -0.21
CLP1-205ENST00000533682 MAP7D2Q96T17 732 aa13.76□□□□□ -0.21
CLP1-205ENST00000533682 DAGLAQ9Y4D2 1042 aa13.76□□□□□ -0.21
CLP1-205ENST00000533682 FLT1P17948 1338 aa13.76□□□□□ -0.21
CLP1-205ENST00000533682 CNTNAP5Q8WYK1 1306 aa13.76□□□□□ -0.21
CLP1-205ENST00000533682 NAV1Q8NEY1 1877 aa13.76□□□□□ -0.21
CLP1-205ENST00000533682 LRRC37AA6NMS7 1700 aa13.76□□□□□ -0.21
CLP1-205ENST00000533682 BIN1O00499 593 aa13.76□□□□□ -0.21
CLP1-205ENST00000533682 TSPY3P0CV98 308 aa13.76□□□□□ -0.21
CLP1-205ENST00000533682 TSPY8P0CW00 308 aa13.76□□□□□ -0.21
CLP1-205ENST00000533682 SLURP2P0DP57 97 aa13.76□□□□□ -0.21
CLP1-205ENST00000533682 RASA1P20936 1047 aa13.76□□□□□ -0.21
CLP1-205ENST00000533682 CHRNA5P30532 468 aa13.76□□□□□ -0.21
CLP1-205ENST00000533682 EN1Q05925 392 aaPredicted RBP13.76□□□□□ -0.21
CLP1-205ENST00000533682 EZH2Q15910 746 aaKnown RBP13.76□□□□□ -0.21
CLP1-205ENST00000533682 ISM2Q6H9L7 571 aa13.76□□□□□ -0.21
CLP1-205ENST00000533682 SPC24Q8NBT2 197 aa13.76□□□□□ -0.21
CLP1-205ENST00000533682 CTCFLQ8NI51 663 aaPredicted RBP13.76□□□□□ -0.21
CLP1-205ENST00000533682 FOXP1Q9H334 677 aaPredicted RBP13.76□□□□□ -0.21
CLP1-205ENST00000533682 DBNDD1Q9H9R9 158 aa13.76□□□□□ -0.21
CLP1-205ENST00000533682 NOL7Q9UMY1 257 aaKnown RBP13.76□□□□□ -0.21
CLP1-205ENST00000533682 STX8Q9UNK0 236 aa13.76□□□□□ -0.21
CLP1-205ENST00000533682 DDAH1O94760 285 aa13.75□□□□□ -0.21
CLP1-205ENST00000533682 NPY5RQ15761 445 aa13.75□□□□□ -0.21
CLP1-205ENST00000533682 POTEAQ6S8J7 498 aa13.75□□□□□ -0.21
CLP1-205ENST00000533682 ZNF444Q8N0Y2 327 aaPredicted RBP13.75□□□□□ -0.21
CLP1-205ENST00000533682 PNMA1Q8ND90 353 aa13.75□□□□□ -0.21
CLP1-205ENST00000533682 RGS22Q8NE09 1264 aa13.75□□□□□ -0.21
CLP1-205ENST00000533682 PHF20Q9BVI0 1012 aa13.75□□□□□ -0.21
CLP1-205ENST00000533682 CPVLQ9H3G5 476 aa13.75□□□□□ -0.21
CLP1-205ENST00000533682 MYH1P12882 1939 aa13.75□□□□□ -0.21
CLP1-205ENST00000533682 PDE6BP35913 854 aa13.75□□□□□ -0.21
CLP1-205ENST00000533682 CDK8P49336 464 aa13.75□□□□□ -0.21
CLP1-205ENST00000533682 PPP2R5BQ15173 497 aa13.75□□□□□ -0.21
CLP1-205ENST00000533682 SLC35G1Q2M3R5 365 aa13.75□□□□□ -0.21
CLP1-205ENST00000533682 TMED8Q6PL24 325 aaPredicted RBP13.75□□□□□ -0.21
CLP1-205ENST00000533682 KAT14Q9H8E8 782 aa13.75□□□□□ -0.21
CLP1-205ENST00000533682 RBM28Q9NW13 759 aaKnown RBP13.75□□□□□ -0.21
CLP1-205ENST00000533682 PCDHAC2Q9Y5I4 1007 aa13.75□□□□□ -0.21
CLP1-205ENST00000533682 FAM205AQ6ZU69 1335 aa13.75□□□□□ -0.21
CLP1-205ENST00000533682 NRXN2Q9P2S2 1712 aa13.75□□□□□ -0.21
CLP1-205ENST00000533682 CTAGE5O15320 804 aa13.74□□□□□ -0.21
CLP1-205ENST00000533682 PPP6R2O75170 966 aa13.74□□□□□ -0.21
CLP1-205ENST00000533682 GOLGA8HP0CJ92 632 aa13.74□□□□□ -0.21
CLP1-205ENST00000533682 CALM1P0DP23 149 aa13.74□□□□□ -0.21
CLP1-205ENST00000533682 CALM2P0DP24 149 aa13.74□□□□□ -0.21
CLP1-205ENST00000533682 CALM3P0DP25 149 aa13.74□□□□□ -0.21
CLP1-205ENST00000533682 TERF1P54274 439 aa13.74□□□□□ -0.21
CLP1-205ENST00000533682 IQCB1Q15051 598 aa13.74□□□□□ -0.21
CLP1-205ENST00000533682 MASTLQ96GX5 879 aa13.74□□□□□ -0.21
CLP1-205ENST00000533682 COA1Q9GZY4 146 aa13.74□□□□□ -0.21
CLP1-205ENST00000533682 TTC12Q9H892 705 aaPredicted RBP13.74□□□□□ -0.21
CLP1-205ENST00000533682 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.74□□□□□ -0.21
CLP1-205ENST00000533682 TTF2Q9UNY4 1162 aaKnown RBP13.74□□□□□ -0.21
CLP1-205ENST00000533682 MSNP26038 577 aaKnown RBP13.74□□□□□ -0.21
CLP1-205ENST00000533682 ALDH1B1P30837 517 aa13.74□□□□□ -0.21
CLP1-205ENST00000533682 HS1BP3Q53T59 392 aa13.74□□□□□ -0.21
CLP1-205ENST00000533682 USP49Q70CQ1 688 aa13.74□□□□□ -0.21
CLP1-205ENST00000533682 C2CD5Q86YS7 1000 aa13.74□□□□□ -0.21
CLP1-205ENST00000533682 TBC1D22AQ8WUA7 517 aa13.74□□□□□ -0.21
CLP1-205ENST00000533682 FAM163AQ96GL9 167 aaPredicted RBP13.74□□□□□ -0.21
CLP1-205ENST00000533682 DDX4Q9NQI0 724 aaKnown RBP13.74□□□□□ -0.21
CLP1-205ENST00000533682 KIAA1468Q9P260 1216 aa13.74□□□□□ -0.21
CLP1-205ENST00000533682 CCDC39Q9UFE4 941 aa13.74□□□□□ -0.21
CLP1-205ENST00000533682 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.74□□□□□ -0.21
CLP1-205ENST00000533682 GAKO14976 1311 aa13.74□□□□□ -0.21
CLP1-205ENST00000533682 ADAMTSL1Q8N6G6 1762 aa13.74□□□□□ -0.21
CLP1-205ENST00000533682 SLX4Q8IY92 1834 aa13.73□□□□□ -0.21
CLP1-205ENST00000533682 SYKP43405 635 aa13.73□□□□□ -0.21
CLP1-205ENST00000533682 LONRF3Q496Y0 759 aa13.73□□□□□ -0.21
CLP1-205ENST00000533682 AMOTL1Q8IY63 956 aa13.73□□□□□ -0.21
CLP1-205ENST00000533682 GPKOWQ92917 476 aaPredicted RBP eCLIP13.73□□□□□ -0.21
CLP1-205ENST00000533682 TMEM47Q9BQJ4 181 aa13.73□□□□□ -0.21
CLP1-205ENST00000533682 HPSEQ9Y251 543 aa13.73□□□□□ -0.21
CLP1-205ENST00000533682 ZKSCAN5Q9Y2L8 839 aa13.73□□□□□ -0.21
CLP1-205ENST00000533682 DDX60LQ5H9U9 1706 aaKnown RBP13.73□□□□□ -0.21
CLP1-205ENST00000533682 ROBO3Q96MS0 1386 aa13.73□□□□□ -0.21
CLP1-205ENST00000533682 FOXN1O15353 648 aa13.73□□□□□ -0.21
CLP1-205ENST00000533682 STX1AQ16623 288 aa13.73□□□□□ -0.21
CLP1-205ENST00000533682 DPCR1Q3MIW9 517 aa13.73□□□□□ -0.21
CLP1-205ENST00000533682 RESP18Q5W5W9 173 aa13.73□□□□□ -0.21
CLP1-205ENST00000533682 TMC4Q7Z404 712 aa13.73□□□□□ -0.21
CLP1-205ENST00000533682 DGKHQ86XP1 1220 aa13.73□□□□□ -0.21
CLP1-205ENST00000533682 KLHL34Q8N239 644 aa13.73□□□□□ -0.21
CLP1-205ENST00000533682 MAD2L2Q9UI95 211 aa13.73□□□□□ -0.21
CLP1-205ENST00000533682 CYTH3O43739 400 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms