RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 TCF3P15923 654 aa4.5□□□□□ -1.69
ATM-220ENST00000533526 CCNFP41002 786 aa4.5□□□□□ -1.69
ATM-220ENST00000533526 TNNI2P48788 182 aa4.5□□□□□ -1.69
ATM-220ENST00000533526 CLCN7P51798 805 aa4.5□□□□□ -1.69
ATM-220ENST00000533526 CLCQ05315 142 aa4.5□□□□□ -1.69
ATM-220ENST00000533526 PAK2Q13177 524 aa4.5□□□□□ -1.69
ATM-220ENST00000533526 CDCP2Q5VXM1 449 aa4.5□□□□□ -1.69
ATM-220ENST00000533526 C9orf131Q5VYM1 1079 aa4.5□□□□□ -1.69
ATM-220ENST00000533526 INTS3Q68E01 1043 aaKnown RBP4.5□□□□□ -1.69
ATM-220ENST00000533526 PLD6Q8N2A8 252 aaKnown RBP4.5□□□□□ -1.69
ATM-220ENST00000533526 FAM181AQ8N9Y4 354 aa4.5□□□□□ -1.69
ATM-220ENST00000533526 AGBL5Q8NDL9 886 aa4.5□□□□□ -1.69
ATM-220ENST00000533526 RASGRP4Q8TDF6 673 aa4.5□□□□□ -1.69
ATM-220ENST00000533526 ASB11Q8WXH4 323 aa4.5□□□□□ -1.69
ATM-220ENST00000533526 HRASLS5Q96KN8 279 aa4.5□□□□□ -1.69
ATM-220ENST00000533526 DPH2Q9BQC3 489 aaPredicted RBP4.5□□□□□ -1.69
ATM-220ENST00000533526 TNKS2Q9H2K2 1166 aa4.5□□□□□ -1.69
ATM-220ENST00000533526 CCSER2Q9H7U1 834 aa4.5□□□□□ -1.69
ATM-220ENST00000533526 CCDC39Q9UFE4 941 aa4.5□□□□□ -1.69
ATM-220ENST00000533526 KLHL3Q9UH77 587 aa4.5□□□□□ -1.69
ATM-220ENST00000533526 KCNH3Q9ULD8 1083 aa4.5□□□□□ -1.69
ATM-220ENST00000533526 MEIS3P2A8K0S8 358 aa4.49□□□□□ -1.69
ATM-220ENST00000533526 RAG1P15918 1043 aa4.49□□□□□ -1.69
ATM-220ENST00000533526 ERCC5P28715 1186 aaPredicted RBP4.49□□□□□ -1.69
ATM-220ENST00000533526 GJA8P48165 433 aa4.49□□□□□ -1.69
ATM-220ENST00000533526 RAD51AP2Q09MP3 1159 aa4.49□□□□□ -1.69
ATM-220ENST00000533526 AOC3Q16853 763 aa4.49□□□□□ -1.69
ATM-220ENST00000533526 NKPD1Q17RQ9 610 aa4.49□□□□□ -1.69
ATM-220ENST00000533526 ARSHQ5FYA8 562 aa4.49□□□□□ -1.69
ATM-220ENST00000533526 VPS37DQ86XT2 251 aa4.49□□□□□ -1.69
ATM-220ENST00000533526 MFSD4AQ8N468 514 aa4.49□□□□□ -1.69
ATM-220ENST00000533526 DNAJB8Q8NHS0 232 aa4.49□□□□□ -1.69
ATM-220ENST00000533526 PIWIL2Q8TC59 973 aaKnown RBP4.49□□□□□ -1.69
ATM-220ENST00000533526 PPP1R13LQ8WUF5 828 aa4.49□□□□□ -1.69
ATM-220ENST00000533526 BCL7CQ8WUZ0 217 aaPredicted RBP4.49□□□□□ -1.69
ATM-220ENST00000533526 ZNF428Q96B54 188 aa4.49□□□□□ -1.69
ATM-220ENST00000533526 GPRASP2Q96D09 838 aa4.49□□□□□ -1.69
ATM-220ENST00000533526 ATG4CQ96DT6 458 aa4.49□□□□□ -1.69
ATM-220ENST00000533526 FERD3LQ96RJ6 166 aa4.49□□□□□ -1.69
ATM-220ENST00000533526 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.49□□□□□ -1.69
ATM-220ENST00000533526 CNNM2Q9H8M5 875 aa4.49□□□□□ -1.69
ATM-220ENST00000533526 PLAGL2Q9UPG8 496 aa4.49□□□□□ -1.69
ATM-220ENST00000533526 CBX7O95931 251 aa4.48□□□□□ -1.69
ATM-220ENST00000533526 ITIH2P19823 946 aa4.48□□□□□ -1.69
ATM-220ENST00000533526 GP2P55259 537 aaKnown RBP4.48□□□□□ -1.69
ATM-220ENST00000533526 GNL2Q13823 731 aaKnown RBP4.48□□□□□ -1.69
ATM-220ENST00000533526 NLRC3Q7RTR2 1065 aa4.48□□□□□ -1.69
ATM-220ENST00000533526 THAP5Q7Z6K1 395 aa4.48□□□□□ -1.69
ATM-220ENST00000533526 SPACA3Q8IXA5 215 aa4.48□□□□□ -1.69
ATM-220ENST00000533526 TP53INP2Q8IXH6 220 aa4.48□□□□□ -1.69
ATM-220ENST00000533526 RBBP8NLQ8NC74 664 aaPredicted RBP4.48□□□□□ -1.69
ATM-220ENST00000533526 FLCNQ8NFG4 579 aa4.48□□□□□ -1.69
ATM-220ENST00000533526 BAHD1Q8TBE0 780 aaPredicted RBP4.48□□□□□ -1.69
ATM-220ENST00000533526 RNF141Q8WVD5 230 aa4.48□□□□□ -1.69
ATM-220ENST00000533526 TMEM40Q8WWA1 233 aa4.48□□□□□ -1.69
ATM-220ENST00000533526 SEC16BQ96JE7 1060 aa4.48□□□□□ -1.69
ATM-220ENST00000533526 CRBNQ96SW2 442 aa4.48□□□□□ -1.69
ATM-220ENST00000533526 KIF2CQ99661 725 aa4.48□□□□□ -1.69
ATM-220ENST00000533526 ZNRF3Q9ULT6 936 aa4.48□□□□□ -1.69
ATM-220ENST00000533526 INPP5FQ9Y2H2 1132 aa4.48□□□□□ -1.69
ATM-220ENST00000533526 CAPN6Q9Y6Q1 641 aa4.48□□□□□ -1.69
ATM-220ENST00000533526 DNAJA2O60884 412 aa4.47□□□□□ -1.69
ATM-220ENST00000533526 NME1P15531 152 aaKnown RBP4.47□□□□□ -1.69
ATM-220ENST00000533526 SOX9P48436 509 aa4.47□□□□□ -1.69
ATM-220ENST00000533526 RNF4P78317 190 aa4.47□□□□□ -1.69
ATM-220ENST00000533526 OVOS1Q6IE37 1185 aa4.47□□□□□ -1.69
ATM-220ENST00000533526 KREMEN1Q96MU8 473 aa4.47□□□□□ -1.69
ATM-220ENST00000533526 ASPNQ9BXN1 380 aa4.47□□□□□ -1.69
ATM-220ENST00000533526 TRIT1Q9H3H1 467 aaKnown RBP4.47□□□□□ -1.69
ATM-220ENST00000533526 LMCD1Q9NZU5 365 aa4.47□□□□□ -1.69
ATM-220ENST00000533526 CNTNAP4Q9C0A0 1308 aa4.46□□□□□ -1.69
ATM-220ENST00000533526 PRR33A8MZF0 331 aa4.46□□□□□ -1.7
ATM-220ENST00000533526 TNFRSF10CO14798 259 aa4.46□□□□□ -1.7
ATM-220ENST00000533526 TNK2Q07912 1038 aa4.46□□□□□ -1.7
ATM-220ENST00000533526 BNIP3Q12983 259 aa4.46□□□□□ -1.7
ATM-220ENST00000533526 CDKAL1Q5VV42 579 aa4.46□□□□□ -1.7
ATM-220ENST00000533526 FBXW10Q5XX13 1052 aa4.46□□□□□ -1.7
ATM-220ENST00000533526 TAB3Q8N5C8 712 aaPredicted RBP4.46□□□□□ -1.7
ATM-220ENST00000533526 OR6P1Q8NGX9 317 aa4.46□□□□□ -1.7
ATM-220ENST00000533526 VWCEQ96DN2 955 aa4.46□□□□□ -1.7
ATM-220ENST00000533526 DHRS1Q96LJ7 313 aa4.46□□□□□ -1.7
ATM-220ENST00000533526 HSPA12BQ96MM6 686 aa4.46□□□□□ -1.7
ATM-220ENST00000533526 TM9SF2Q99805 663 aa4.46□□□□□ -1.7
ATM-220ENST00000533526 GPR62Q9BZJ7 368 aa4.46□□□□□ -1.7
ATM-220ENST00000533526 ACBD3Q9H3P7 528 aa4.46□□□□□ -1.7
ATM-220ENST00000533526 PAK6Q9NQU5 681 aaPredicted RBP4.46□□□□□ -1.7
ATM-220ENST00000533526 GINM1Q9NU53 330 aa4.46□□□□□ -1.7
ATM-220ENST00000533526 GPATCH2Q9NW75 528 aa4.46□□□□□ -1.7
ATM-220ENST00000533526 STRIP2Q9ULQ0 834 aa4.46□□□□□ -1.7
ATM-220ENST00000533526 EFR3BQ9Y2G0 817 aa4.46□□□□□ -1.7
ATM-220ENST00000533526 ST14Q9Y5Y6 855 aa4.46□□□□□ -1.7
ATM-220ENST00000533526 U3KQE9 123 aa4.46□□□□□ -1.7
ATM-220ENST00000533526 ADAMTS4O75173 837 aa4.45□□□□□ -1.7
ATM-220ENST00000533526 CLEC3AO75596 197 aa4.45□□□□□ -1.7
ATM-220ENST00000533526 UBOX5O94941 541 aa4.45□□□□□ -1.7
ATM-220ENST00000533526 CD8BP10966 210 aa4.45□□□□□ -1.7
ATM-220ENST00000533526 EIF6P56537 245 aaKnown RBP4.45□□□□□ -1.7
ATM-220ENST00000533526 ANGEL2Q5VTE6 544 aaKnown RBP4.45□□□□□ -1.7
ATM-220ENST00000533526 SPRED2Q7Z698 418 aa4.45□□□□□ -1.7
ATM-220ENST00000533526 ENOX1Q8TC92 643 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms