RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 DACT3Q96B18 629 aaPredicted RBP8.69□□□□□ -1.02
CSRP1-218ENST00000533402 RASSF10A6NK89 507 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 BTBD11A6QL63 1104 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 STX17P56962 302 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 MRPS9P82933 396 aaKnown RBP8.69□□□□□ -1.02
CSRP1-218ENST00000533402 ACBD5Q5T8D3 534 aaPredicted RBP8.69□□□□□ -1.02
CSRP1-218ENST00000533402 RBM26Q5T8P6 1007 aaKnown RBP8.69□□□□□ -1.02
CSRP1-218ENST00000533402 ELMSAN1Q6PJG2 1045 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 TMTC1Q8IUR5 882 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 BOLA2Q9H3K6 86 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 SH2D4AQ9H788 454 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 NOD1Q9Y239 953 aa8.69□□□□□ -1.02
CSRP1-218ENST00000533402 IARSP41252 1262 aaKnown RBP8.68□□□□□ -1.02
CSRP1-218ENST00000533402 MAP3K12Q12852 859 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 UAP1Q16222 522 aaPredicted RBP8.68□□□□□ -1.02
CSRP1-218ENST00000533402 HVCN1Q96D96 273 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 FGD4Q96M96 766 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 TRIM31Q9BZY9 425 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 CLSTN2Q9H4D0 955 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 FAM169AQ9Y6X4 670 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 TMEM110-MUSTN1A8MSY1 372 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 NBPF7P0C2Y1 421 aaPredicted RBP8.68□□□□□ -1.02
CSRP1-218ENST00000533402 SERPINB6P35237 376 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 FAM133BQ5BKY9 247 aaKnown RBP8.68□□□□□ -1.02
CSRP1-218ENST00000533402 NME8Q8N427 588 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 APBA1Q02410 837 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 ACTN3Q08043 901 aaPredicted RBP8.68□□□□□ -1.02
CSRP1-218ENST00000533402 C16orf87Q6PH81 154 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 SEPT8Q92599 483 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 PCDHB15Q9Y5E8 787 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 APOBRQ0VD83 1088 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 ZNF444Q8N0Y2 327 aaPredicted RBP8.68□□□□□ -1.02
CSRP1-218ENST00000533402 TXNDC16Q9P2K2 825 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 CCDC194A0A1B0GVG4 234 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 CCDC151A5D8V7 595 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 ERCC5P28715 1186 aaPredicted RBP8.68□□□□□ -1.02
CSRP1-218ENST00000533402 CCT6AP40227 531 aaKnown RBP8.68□□□□□ -1.02
CSRP1-218ENST00000533402 OTUD7BQ6GQQ9 843 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 NOX5Q96PH1 765 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 ATP6V0A2Q9Y487 856 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 LMTK3Q96Q04 1460 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 GOLGA8AA7E2F4 631 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 PLCB3Q01970 1234 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 PRPF38AQ8NAV1 312 aaKnown RBP8.68□□□□□ -1.02
CSRP1-218ENST00000533402 TRPM1Q7Z4N2 1603 aa8.68□□□□□ -1.02
CSRP1-218ENST00000533402 GCFC2P16383 781 aaKnown RBP8.67□□□□□ -1.02
CSRP1-218ENST00000533402 STAT6P42226 847 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 SRLQ86TD4 932 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 SPC25Q9HBM1 224 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 FRMD4BQ9Y2L6 1034 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 PDHA1P08559 390 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 ANKRD42Q8N9B4 389 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 EVI5LQ96CN4 794 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 RILPQ96NA2 401 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 ZSCAN20P17040 1043 aaPredicted RBP8.67□□□□□ -1.02
CSRP1-218ENST00000533402 SBNO1A3KN83 1393 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 A2ML1A8K2U0 1454 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 GAS8O95995 478 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 ARL1P40616 181 aaPredicted RBP8.67□□□□□ -1.02
CSRP1-218ENST00000533402 KLHL7Q8IXQ5 586 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 NDC80O14777 642 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 GADD45BO75293 160 aaPredicted RBP8.67□□□□□ -1.02
CSRP1-218ENST00000533402 SEL1L2Q5TEA6 688 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 BRF1Q92994 677 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 LRRC59Q96AG4 307 aaKnown RBP8.67□□□□□ -1.02
CSRP1-218ENST00000533402 PSMB7Q99436 277 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 LRRC27Q9C0I9 530 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 PRKAG2Q9UGJ0 569 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 FRMPD1Q5SYB0 1578 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 TRIM66O15016 1216 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 HOXB7P09629 217 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 METTL24Q5JXM2 366 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 FBXO31Q5XUX0 539 aaPredicted RBP8.67□□□□□ -1.02
CSRP1-218ENST00000533402 ZC3H18Q86VM9 953 aaKnown RBP8.67□□□□□ -1.02
CSRP1-218ENST00000533402 ESYT1Q9BSJ8 1104 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 BATF3Q9NR55 127 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 MORC2Q9Y6X9 1032 aaPredicted RBP8.67□□□□□ -1.02
CSRP1-218ENST00000533402 ITSN1Q15811 1721 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 MTX1Q13505 466 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 GJC2Q5T442 439 aaPredicted RBP8.67□□□□□ -1.02
CSRP1-218ENST00000533402 DONSONQ9NYP3 566 aa8.67□□□□□ -1.02
CSRP1-218ENST00000533402 DBF4Q9UBU7 674 aaPredicted RBP8.67□□□□□ -1.02
CSRP1-218ENST00000533402 IFNL2Q8IZJ0 200 aa8.66□□□□□ -1.02
CSRP1-218ENST00000533402 CDC42BPGQ6DT37 1551 aa8.66□□□□□ -1.02
CSRP1-218ENST00000533402 EIF6P56537 245 aaKnown RBP8.66□□□□□ -1.02
CSRP1-218ENST00000533402 SCYL3Q8IZE3 742 aa8.66□□□□□ -1.02
CSRP1-218ENST00000533402 TSKSQ9UJT2 592 aa8.66□□□□□ -1.02
CSRP1-218ENST00000533402 TTC41PQ6P2S7 1318 aa8.66□□□□□ -1.02
CSRP1-218ENST00000533402 KRT10P13645 584 aa8.66□□□□□ -1.02
CSRP1-218ENST00000533402 TMED10P49755 219 aaKnown RBP8.66□□□□□ -1.02
CSRP1-218ENST00000533402 TTF1Q15361 905 aaPredicted RBP8.66□□□□□ -1.02
CSRP1-218ENST00000533402 DPY19L2Q6NUT2 758 aa8.66□□□□□ -1.02
CSRP1-218ENST00000533402 ARHGAP18Q8N392 663 aa8.66□□□□□ -1.02
CSRP1-218ENST00000533402 RRP36Q96EU6 259 aaKnown RBP8.66□□□□□ -1.02
CSRP1-218ENST00000533402 PLCG2P16885 1265 aa8.66□□□□□ -1.02
CSRP1-218ENST00000533402 MCM7P33993 719 aa8.66□□□□□ -1.02
CSRP1-218ENST00000533402 IFIT5Q13325 482 aaKnown RBP8.66□□□□□ -1.02
CSRP1-218ENST00000533402 KIAA2013Q8IYS2 634 aa8.66□□□□□ -1.02
CSRP1-218ENST00000533402 MRRFQ96E11 262 aaKnown RBP8.66□□□□□ -1.02
CSRP1-218ENST00000533402 PFDN4Q9NQP4 134 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms